RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 BECN1Q14457 450 aa10.79□□□□□ -0.68
HPS4-204ENST00000422379 NBR1Q14596 966 aa10.79□□□□□ -0.68
HPS4-204ENST00000422379 CASC1Q6TDU7 716 aa10.79□□□□□ -0.68
HPS4-204ENST00000422379 EYA3Q99504 573 aa10.79□□□□□ -0.68
HPS4-204ENST00000422379 LRP2BPQ9P2M1 347 aa10.79□□□□□ -0.68
HPS4-204ENST00000422379 MYH7P12883 1935 aa10.79□□□□□ -0.68
HPS4-204ENST00000422379 HIP1O00291 1037 aa10.78□□□□□ -0.68
HPS4-204ENST00000422379 MAP3K12Q12852 859 aa10.78□□□□□ -0.68
HPS4-204ENST00000422379 UBE3CQ15386 1083 aa10.78□□□□□ -0.68
HPS4-204ENST00000422379 DIXDC1Q155Q3 683 aa10.78□□□□□ -0.68
HPS4-204ENST00000422379 MCMDC2Q4G0Z9 681 aa10.78□□□□□ -0.68
HPS4-204ENST00000422379 MIGA1Q8NAN2 632 aa10.78□□□□□ -0.68
HPS4-204ENST00000422379 APPBP2Q92624 585 aa10.78□□□□□ -0.68
HPS4-204ENST00000422379 RAI14Q9P0K7 980 aa10.78□□□□□ -0.68
HPS4-204ENST00000422379 CCDC171Q6TFL3 1326 aa10.78□□□□□ -0.68
HPS4-204ENST00000422379 RAD50Q92878 1312 aa10.78□□□□□ -0.68
HPS4-204ENST00000422379 ZFYP08048 801 aaPredicted RBP10.78□□□□□ -0.68
HPS4-204ENST00000422379 MFSD14BQ5SR56 506 aa10.78□□□□□ -0.68
HPS4-204ENST00000422379 DACT2Q5SW24 774 aa10.78□□□□□ -0.68
HPS4-204ENST00000422379 WDR66Q8TBY9 1149 aa10.78□□□□□ -0.68
HPS4-204ENST00000422379 TBC1D2Q9BYX2 928 aa10.78□□□□□ -0.68
HPS4-204ENST00000422379 HELLSQ9NRZ9 838 aa10.78□□□□□ -0.68
HPS4-204ENST00000422379 ARFGEF1Q9Y6D6 1849 aa10.77□□□□□ -0.68
HPS4-204ENST00000422379 ADAMTSL1Q8N6G6 1762 aa10.77□□□□□ -0.69
HPS4-204ENST00000422379 GPAA1O43292 621 aa10.77□□□□□ -0.69
HPS4-204ENST00000422379 EIF5BO60841 1220 aaKnown RBP10.77□□□□□ -0.69
HPS4-204ENST00000422379 CYP7A1P22680 504 aa10.77□□□□□ -0.69
HPS4-204ENST00000422379 IARSP41252 1262 aaKnown RBP10.77□□□□□ -0.69
HPS4-204ENST00000422379 DYNLL1P63167 89 aaKnown RBP10.77□□□□□ -0.69
HPS4-204ENST00000422379 TTLL5Q6EMB2 1281 aa10.77□□□□□ -0.69
HPS4-204ENST00000422379 PODNQ7Z5L7 613 aa10.77□□□□□ -0.69
HPS4-204ENST00000422379 TICAM2Q86XR7 235 aa10.77□□□□□ -0.69
HPS4-204ENST00000422379 RASEFQ8IZ41 740 aa10.77□□□□□ -0.69
HPS4-204ENST00000422379 LCORLQ8N3X6 602 aa10.77□□□□□ -0.69
HPS4-204ENST00000422379 RIOK1Q9BRS2 568 aaKnown RBP10.77□□□□□ -0.69
HPS4-204ENST00000422379 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.77□□□□□ -0.691e-6■■□□□ 12.5
HPS4-204ENST00000422379 TAOK3Q9H2K8 898 aa10.77□□□□□ -0.69
HPS4-204ENST00000422379 ARMT1Q9H993 441 aa10.77□□□□□ -0.69
HPS4-204ENST00000422379 PRKAB2O43741 272 aa10.76□□□□□ -0.69
HPS4-204ENST00000422379 REC8O95072 547 aa10.76□□□□□ -0.69
HPS4-204ENST00000422379 MBD4O95243 580 aa10.76□□□□□ -0.69
HPS4-204ENST00000422379 GRIPAP1Q4V328 841 aa10.76□□□□□ -0.69
HPS4-204ENST00000422379 SOGA3Q5TF21 947 aa10.76□□□□□ -0.69
HPS4-204ENST00000422379 LARGE2Q8N3Y3 721 aa10.76□□□□□ -0.69
HPS4-204ENST00000422379 SUPT20HQ8NEM7 779 aa10.76□□□□□ -0.69
HPS4-204ENST00000422379 RUFY2Q8WXA3 655 aa10.76□□□□□ -0.69
HPS4-204ENST00000422379 MAP4K1Q92918 833 aa10.76□□□□□ -0.69
HPS4-204ENST00000422379 FBXW7Q969H0 707 aa10.76□□□□□ -0.69
HPS4-204ENST00000422379 STRBPQ96SI9 672 aaKnown RBP10.76□□□□□ -0.69
HPS4-204ENST00000422379 PCDHAC2Q9Y5I4 1007 aa10.76□□□□□ -0.69
HPS4-204ENST00000422379 MAST2Q6P0Q8 1798 aa10.76□□□□□ -0.69
HPS4-204ENST00000422379 RAD17O75943 681 aa10.76□□□□□ -0.69
HPS4-204ENST00000422379 HSPD1P10809 573 aaKnown RBP10.76□□□□□ -0.69
HPS4-204ENST00000422379 NAA16Q6N069 864 aaPredicted RBP10.76□□□□□ -0.69
HPS4-204ENST00000422379 EPB41L4AQ9HCS5 686 aaPredicted RBP10.76□□□□□ -0.69
HPS4-204ENST00000422379 RBM8AQ9Y5S9 174 aaKnown RBP10.76□□□□□ -0.69
HPS4-204ENST00000422379 LTBP3Q9NS15 1303 aa10.75□□□□□ -0.69
HPS4-204ENST00000422379 F8W031 263 aaPredicted RBP10.75□□□□□ -0.69
HPS4-204ENST00000422379 SMIM22K7EJ46 135 aa10.75□□□□□ -0.69
HPS4-204ENST00000422379 LDHBP07195 334 aaKnown RBP10.75□□□□□ -0.69
HPS4-204ENST00000422379 NECTIN1Q15223 517 aa10.75□□□□□ -0.69
HPS4-204ENST00000422379 HSPA4P34932 840 aa10.74□□□□□ -0.69
HPS4-204ENST00000422379 EVX2Q03828 476 aa10.74□□□□□ -0.69
HPS4-204ENST00000422379 STRIP1Q5VSL9 837 aa10.74□□□□□ -0.69
HPS4-204ENST00000422379 ZSCAN25Q6NSZ9 544 aa10.74□□□□□ -0.69
HPS4-204ENST00000422379 NKX2-3Q8TAU0 364 aa10.74□□□□□ -0.69
HPS4-204ENST00000422379 USP17L3A6NCW0 530 aa10.74□□□□□ -0.69
HPS4-204ENST00000422379 USP17L4A6NCW7 530 aa10.74□□□□□ -0.69
HPS4-204ENST00000422379 G3V3G9 751 aa10.74□□□□□ -0.69
HPS4-204ENST00000422379 PSMD14O00487 310 aa10.74□□□□□ -0.69
HPS4-204ENST00000422379 SCNN1DP51172 638 aa10.74□□□□□ -0.69
HPS4-204ENST00000422379 CXCL9Q07325 125 aa10.74□□□□□ -0.69
HPS4-204ENST00000422379 DCAF8Q5TAQ9 597 aa10.74□□□□□ -0.69
HPS4-204ENST00000422379 USP17L1Q7RTZ2 530 aa10.74□□□□□ -0.69
HPS4-204ENST00000422379 DZIP1Q86YF9 867 aaKnown RBP10.74□□□□□ -0.69
HPS4-204ENST00000422379 KIAA0825Q8IV33 1275 aa10.74□□□□□ -0.69
HPS4-204ENST00000422379 AATFQ9NY61 560 aaKnown RBP eCLIP10.74□□□□□ -0.69
HPS4-204ENST00000422379 ZBTB12Q9Y330 459 aaPredicted RBP10.74□□□□□ -0.69
HPS4-204ENST00000422379 SHTN1A0MZ66 631 aa10.73□□□□□ -0.69
HPS4-204ENST00000422379 GSG1L2A8MUP6 293 aa10.73□□□□□ -0.69
HPS4-204ENST00000422379 KIAA1211Q6ZU35 1233 aa10.73□□□□□ -0.69
HPS4-204ENST00000422379 ARHGAP27Q6ZUM4 889 aa10.73□□□□□ -0.69
HPS4-204ENST00000422379 ZGPATQ8N5A5 531 aaKnown RBP10.73□□□□□ -0.69
HPS4-204ENST00000422379 TBC1D22AQ8WUA7 517 aa10.73□□□□□ -0.69
HPS4-204ENST00000422379 SDR42E1Q8WUS8 393 aa10.73□□□□□ -0.69
HPS4-204ENST00000422379 KCNB2Q92953 911 aa10.73□□□□□ -0.69
HPS4-204ENST00000422379 GMLQ99445 158 aa10.73□□□□□ -0.69
HPS4-204ENST00000422379 NBPF3Q9H094 633 aa10.73□□□□□ -0.69
HPS4-204ENST00000422379 ZNRF3Q9ULT6 936 aa10.73□□□□□ -0.69
HPS4-204ENST00000422379 TTF2Q9UNY4 1162 aaKnown RBP10.73□□□□□ -0.69
HPS4-204ENST00000422379 SNX14Q9Y5W7 946 aa10.73□□□□□ -0.69
HPS4-204ENST00000422379 MROH7-TTC4A0A0A0MT08 1334 aa10.73□□□□□ -0.69
HPS4-204ENST00000422379 GAKO14976 1311 aa10.73□□□□□ -0.69
HPS4-204ENST00000422379 PSME4Q14997 1843 aa10.73□□□□□ -0.69
HPS4-204ENST00000422379 MAGEB6P1A0A0J9YX57 407 aa10.72□□□□□ -0.69
HPS4-204ENST00000422379 SLC27A2O14975 620 aa10.72□□□□□ -0.69
HPS4-204ENST00000422379 CD2BP2O95400 341 aaKnown RBP10.72□□□□□ -0.69
HPS4-204ENST00000422379 FGAP02671 866 aa10.72□□□□□ -0.69
HPS4-204ENST00000422379 CYP21A2P08686 494 aa10.72□□□□□ -0.69
HPS4-204ENST00000422379 VIL1P09327 827 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms