RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 PRNPP04156 253 aa8.55□□□□□ -1.04
SFXN1-202ENST00000421887 ITGB5P18084 799 aa8.55□□□□□ -1.04
SFXN1-202ENST00000421887 NUTM2GQ5VZR2 741 aa8.55□□□□□ -1.04
SFXN1-202ENST00000421887 C16orf46Q6P387 395 aa8.55□□□□□ -1.04
SFXN1-202ENST00000421887 NFXL1Q6ZNB6 911 aa8.55□□□□□ -1.04
SFXN1-202ENST00000421887 GPR152Q8TDT2 470 aa8.55□□□□□ -1.04
SFXN1-202ENST00000421887 WNT8BQ93098 351 aa8.55□□□□□ -1.04
SFXN1-202ENST00000421887 IQGAP2Q13576 1575 aa8.55□□□□□ -1.04
SFXN1-202ENST00000421887 MAGI3Q5TCQ9 1506 aa8.54□□□□□ -1.04
SFXN1-202ENST00000421887 FLCNQ8NFG4 579 aa8.54□□□□□ -1.04
SFXN1-202ENST00000421887 KANSL3Q9P2N6 904 aa8.54□□□□□ -1.04
SFXN1-202ENST00000421887 FAM95CA0A1B0GW59 222 aa8.53□□□□□ -1.04
SFXN1-202ENST00000421887 PRMT3O60678 531 aa8.53□□□□□ -1.04
SFXN1-202ENST00000421887 ARL4DP49703 201 aa8.53□□□□□ -1.04
SFXN1-202ENST00000421887 COL19A1Q14993 1142 aa8.53□□□□□ -1.04
SFXN1-202ENST00000421887 CPSF6Q16630 551 aaKnown RBP eCLIP8.53□□□□□ -1.04
SFXN1-202ENST00000421887 ZNF648Q5T619 568 aaPredicted RBP8.53□□□□□ -1.04
SFXN1-202ENST00000421887 LCE4AQ5TA78 99 aa8.53□□□□□ -1.04
SFXN1-202ENST00000421887 METTL22Q9BUU2 404 aaPredicted RBP8.53□□□□□ -1.04
SFXN1-202ENST00000421887 BSDC1Q9NW68 430 aaPredicted RBP8.53□□□□□ -1.04
SFXN1-202ENST00000421887 KIF27Q86VH2 1401 aa8.53□□□□□ -1.04
SFXN1-202ENST00000421887 BCORL1Q5H9F3 1711 aa8.52□□□□□ -1.05
SFXN1-202ENST00000421887 MEGF11A6BM72 1044 aa8.52□□□□□ -1.05
SFXN1-202ENST00000421887 ZAP70P43403 619 aa8.52□□□□□ -1.05
SFXN1-202ENST00000421887 USP11P51784 963 aa8.52□□□□□ -1.05
SFXN1-202ENST00000421887 HSPA2P54652 639 aa8.52□□□□□ -1.05
SFXN1-202ENST00000421887 PAOXQ6QHF9 649 aa8.52□□□□□ -1.05
SFXN1-202ENST00000421887 CLUAP1Q96AJ1 413 aa8.52□□□□□ -1.05
SFXN1-202ENST00000421887 MADDQ8WXG6 1647 aa8.51□□□□□ -1.05
SFXN1-202ENST00000421887 ZNF124Q15973 351 aa8.51□□□□□ -1.05
SFXN1-202ENST00000421887 CDCA8Q53HL2 280 aa8.51□□□□□ -1.05
SFXN1-202ENST00000421887 HGSNATQ68CP4 663 aa8.51□□□□□ -1.05
SFXN1-202ENST00000421887 AGBL5Q8NDL9 886 aa8.51□□□□□ -1.05
SFXN1-202ENST00000421887 FBLIM1Q8WUP2 373 aa8.51□□□□□ -1.05
SFXN1-202ENST00000421887 TBC1D32Q96NH3 1257 aa8.51□□□□□ -1.05
SFXN1-202ENST00000421887 ARAP3Q8WWN8 1544 aa8.5□□□□□ -1.05
SFXN1-202ENST00000421887 RIMS1Q86UR5 1692 aaKnown RBP8.5□□□□□ -1.05
SFXN1-202ENST00000421887 ACPPP15309 386 aa8.5□□□□□ -1.05
SFXN1-202ENST00000421887 RFX1P22670 979 aa8.5□□□□□ -1.05
SFXN1-202ENST00000421887 C19orf57Q0VDD7 668 aa8.5□□□□□ -1.05
SFXN1-202ENST00000421887 PROSER2Q86WR7 435 aaPredicted RBP8.5□□□□□ -1.05
SFXN1-202ENST00000421887 MKNK1Q9BUB5 465 aa8.5□□□□□ -1.05
SFXN1-202ENST00000421887 USP26Q9BXU7 913 aa8.5□□□□□ -1.05
SFXN1-202ENST00000421887 CYP4F12Q9HCS2 524 aa8.5□□□□□ -1.05
SFXN1-202ENST00000421887 CARMIL1Q5VZK9 1371 aa8.49□□□□□ -1.05
SFXN1-202ENST00000421887 TNFRSF10BO14763 440 aa8.49□□□□□ -1.05
SFXN1-202ENST00000421887 TRPA1O75762 1119 aa8.49□□□□□ -1.05
SFXN1-202ENST00000421887 ADMP35318 185 aa8.49□□□□□ -1.05
SFXN1-202ENST00000421887 NAA30Q147X3 362 aaPredicted RBP8.49□□□□□ -1.05
SFXN1-202ENST00000421887 DISP1Q96F81 1524 aa8.49□□□□□ -1.05
SFXN1-202ENST00000421887 DRD2P14416 443 aa8.48□□□□□ -1.05
SFXN1-202ENST00000421887 CDPF1Q6NVV7 123 aa8.48□□□□□ -1.05
SFXN1-202ENST00000421887 FNBP4Q8N3X1 1017 aaPredicted RBP8.48□□□□□ -1.05
SFXN1-202ENST00000421887 TMPRSS13Q9BYE2 586 aa8.48□□□□□ -1.05
SFXN1-202ENST00000421887 ELP3Q9H9T3 547 aa8.48□□□□□ -1.05
SFXN1-202ENST00000421887 PAK6Q9NQU5 681 aaPredicted RBP8.48□□□□□ -1.05
SFXN1-202ENST00000421887 TMEM63CQ9P1W3 806 aa8.48□□□□□ -1.05
SFXN1-202ENST00000421887 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.48□□□□□ -1.05
SFXN1-202ENST00000421887 SUPT5HO00267 1087 aaKnown RBP8.47□□□□□ -1.05
SFXN1-202ENST00000421887 PDE2AO00408 941 aaPredicted RBP8.47□□□□□ -1.05
SFXN1-202ENST00000421887 CAPN12Q6ZSI9 719 aa8.47□□□□□ -1.05
SFXN1-202ENST00000421887 FAM9AQ8IZU1 332 aaPredicted RBP8.47□□□□□ -1.05
SFXN1-202ENST00000421887 SMG8Q8ND04 991 aaKnown RBP8.47□□□□□ -1.05
SFXN1-202ENST00000421887 LRRC4CQ9HCJ2 640 aa8.47□□□□□ -1.05
SFXN1-202ENST00000421887 KIAA0556O60303 1618 aa8.47□□□□□ -1.05
SFXN1-202ENST00000421887 PHLDB1Q86UU1 1377 aa8.47□□□□□ -1.05
SFXN1-202ENST00000421887 FAM170BA6NMN3 283 aa8.46□□□□□ -1.06
SFXN1-202ENST00000421887 TIAF1O95411 115 aa8.46□□□□□ -1.06
SFXN1-202ENST00000421887 FBLN7Q53RD9 439 aa8.46□□□□□ -1.06
SFXN1-202ENST00000421887 ZNF438Q7Z4V0 828 aa8.46□□□□□ -1.06
SFXN1-202ENST00000421887 ZAR1Q86SH2 424 aa8.46□□□□□ -1.06
SFXN1-202ENST00000421887 HHIPQ96QV1 700 aa8.46□□□□□ -1.06
SFXN1-202ENST00000421887 CNTN3Q9P232 1028 aa8.46□□□□□ -1.06
SFXN1-202ENST00000421887 NOVA2Q9UNW9 492 aaKnown RBP8.46□□□□□ -1.06
SFXN1-202ENST00000421887 NFKBIEO00221 500 aa8.45□□□□□ -1.06
SFXN1-202ENST00000421887 SOX1O00570 391 aaPredicted RBP8.45□□□□□ -1.06
SFXN1-202ENST00000421887 ZBTB39O15060 712 aa8.45□□□□□ -1.06
SFXN1-202ENST00000421887 RAPGEF3O95398 923 aa8.45□□□□□ -1.06
SFXN1-202ENST00000421887 PAPLNO95428 1278 aa8.45□□□□□ -1.06
SFXN1-202ENST00000421887 SUGCTQ9HAC7 445 aa8.45□□□□□ -1.06
SFXN1-202ENST00000421887 DZANK1Q9NVP4 752 aa8.45□□□□□ -1.06
SFXN1-202ENST00000421887 PRKAG2Q9UGJ0 569 aa8.45□□□□□ -1.06
SFXN1-202ENST00000421887 SALL4Q9UJQ4 1053 aa8.45□□□□□ -1.06
SFXN1-202ENST00000421887 SOX13Q9UN79 622 aa8.45□□□□□ -1.06
SFXN1-202ENST00000421887 POGZQ7Z3K3 1410 aa8.45□□□□□ -1.06
SFXN1-202ENST00000421887 UGGT2Q9NYU1 1516 aa8.44□□□□□ -1.06
SFXN1-202ENST00000421887 DBX1A6NMT0 343 aa8.44□□□□□ -1.06
SFXN1-202ENST00000421887 CES1P23141 567 aa8.44□□□□□ -1.06
SFXN1-202ENST00000421887 IKBKEQ14164 716 aa8.44□□□□□ -1.06
SFXN1-202ENST00000421887 SWI5Q1ZZU3 235 aa8.44□□□□□ -1.06
SFXN1-202ENST00000421887 DUSP27Q5VZP5 1158 aa8.44□□□□□ -1.06
SFXN1-202ENST00000421887 PDE12Q6L8Q7 609 aaKnown RBP8.44□□□□□ -1.06
SFXN1-202ENST00000421887 YIPF2Q9BWQ6 316 aa8.44□□□□□ -1.06
SFXN1-202ENST00000421887 ZC3H7BQ9UGR2 993 aaKnown RBP8.44□□□□□ -1.06
SFXN1-202ENST00000421887 LOC100289279A0A1B0GTE1 492 aa8.43□□□□□ -1.06
SFXN1-202ENST00000421887 DLGAP3O95886 979 aa8.43□□□□□ -1.06
SFXN1-202ENST00000421887 OCLNQ16625 522 aa8.43□□□□□ -1.06
SFXN1-202ENST00000421887 C1orf127Q8N9H9 656 aa8.43□□□□□ -1.06
SFXN1-202ENST00000421887 NUDT16Q96DE0 195 aaKnown RBP8.43□□□□□ -1.06
SFXN1-202ENST00000421887 STIM2Q9P246 746 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms