RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 BBOX1O75936 387 aa12.3□□□□□ -0.44
PTCH1-206ENST00000421141 KRT2P35908 639 aa12.3□□□□□ -0.44
PTCH1-206ENST00000421141 PRKG1Q13976 671 aa12.3□□□□□ -0.44
PTCH1-206ENST00000421141 NFKBIBQ15653 356 aa12.3□□□□□ -0.44
PTCH1-206ENST00000421141 CCDC181Q5TID7 509 aa12.3□□□□□ -0.44
PTCH1-206ENST00000421141 RAB11FIP4Q86YS3 637 aa12.3□□□□□ -0.44
PTCH1-206ENST00000421141 CACNA2D4Q7Z3S7 1137 aa12.3□□□□□ -0.44
PTCH1-206ENST00000421141 NOD1Q9Y239 953 aa12.3□□□□□ -0.44
PTCH1-206ENST00000421141 EXOC1Q9NV70 894 aa12.3□□□□□ -0.44
PTCH1-206ENST00000421141 NPR1P16066 1061 aa12.3□□□□□ -0.44
PTCH1-206ENST00000421141 STAT6P42226 847 aa12.3□□□□□ -0.44
PTCH1-206ENST00000421141 APPBP2Q92624 585 aa12.3□□□□□ -0.44
PTCH1-206ENST00000421141 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.3□□□□□ -0.443e-7■■■■■ 56.2
PTCH1-206ENST00000421141 ZBED4O75132 1171 aa12.3□□□□□ -0.44
PTCH1-206ENST00000421141 PCCAP05165 728 aaPredicted RBP12.3□□□□□ -0.44
PTCH1-206ENST00000421141 HSPA1LP34931 641 aa12.3□□□□□ -0.44
PTCH1-206ENST00000421141 SUCLG2Q96I99 432 aa12.3□□□□□ -0.44
PTCH1-206ENST00000421141 ACBD3Q9H3P7 528 aa12.29□□□□□ -0.44
PTCH1-206ENST00000421141 LEMD3Q9Y2U8 911 aa12.29□□□□□ -0.44
PTCH1-206ENST00000421141 TTLL7Q6ZT98 887 aa12.29□□□□□ -0.44
PTCH1-206ENST00000421141 FAM114A1Q8IWE2 563 aa12.29□□□□□ -0.44
PTCH1-206ENST00000421141 TNPO1Q92973 898 aaKnown RBP12.29□□□□□ -0.44
PTCH1-206ENST00000421141 ZBTB40Q9NUA8 1239 aa12.29□□□□□ -0.44
PTCH1-206ENST00000421141 RTKN2Q8IZC4 609 aa12.29□□□□□ -0.44
PTCH1-206ENST00000421141 BRF1Q92994 677 aa12.29□□□□□ -0.44
PTCH1-206ENST00000421141 SPC25Q9HBM1 224 aa12.29□□□□□ -0.44
PTCH1-206ENST00000421141 HEG1Q9ULI3 1381 aa12.29□□□□□ -0.44
PTCH1-206ENST00000421141 IGHDP01880 384 aa12.29□□□□□ -0.44
PTCH1-206ENST00000421141 ERVV-1B6SEH8 477 aa12.29□□□□□ -0.44
PTCH1-206ENST00000421141 STX6O43752 255 aa12.29□□□□□ -0.44
PTCH1-206ENST00000421141 ANO10Q9NW15 660 aa12.29□□□□□ -0.44
PTCH1-206ENST00000421141 ZNF804BA4D1E1 1349 aa12.29□□□□□ -0.44
PTCH1-206ENST00000421141 LARP6Q9BRS8 491 aaKnown RBP12.28□□□□□ -0.44
PTCH1-206ENST00000421141 PCDHB15Q9Y5E8 787 aa12.28□□□□□ -0.44
PTCH1-206ENST00000421141 CCDC93Q567U6 631 aa12.28□□□□□ -0.44
PTCH1-206ENST00000421141 NAP1L4Q99733 375 aaKnown RBP12.28□□□□□ -0.44
PTCH1-206ENST00000421141 ARMT1Q9H993 441 aa12.28□□□□□ -0.44
PTCH1-206ENST00000421141 USP40Q9NVE5 1235 aa12.28□□□□□ -0.44
PTCH1-206ENST00000421141 PRR36Q9H6K5 1346 aa12.28□□□□□ -0.44
PTCH1-206ENST00000421141 IDEP14735 1019 aa12.28□□□□□ -0.44
PTCH1-206ENST00000421141 SLC1A4P43007 532 aa12.28□□□□□ -0.44
PTCH1-206ENST00000421141 LRRC2Q9BYS8 371 aa12.28□□□□□ -0.44
PTCH1-206ENST00000421141 GPCPD1Q9NPB8 672 aa12.28□□□□□ -0.44
PTCH1-206ENST00000421141 ARGLU1Q9NWB6 273 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-206ENST00000421141 RMND1Q9NWS8 449 aa12.28□□□□□ -0.44
PTCH1-206ENST00000421141 NOP56O00567 594 aaKnown RBP12.28□□□□□ -0.44
PTCH1-206ENST00000421141 MRE11P49959 708 aa12.28□□□□□ -0.44
PTCH1-206ENST00000421141 KIAA1328Q86T90 577 aa12.28□□□□□ -0.44
PTCH1-206ENST00000421141 TTLL6Q8N841 843 aa12.28□□□□□ -0.44
PTCH1-206ENST00000421141 TGFBRAP1Q8WUH2 860 aa12.28□□□□□ -0.44
PTCH1-206ENST00000421141 NEXMIFQ5QGS0 1516 aa12.28□□□□□ -0.44
PTCH1-206ENST00000421141 BACH1O14867 736 aa12.28□□□□□ -0.44
PTCH1-206ENST00000421141 DOK7Q18PE1 504 aa12.28□□□□□ -0.44
PTCH1-206ENST00000421141 CFAP100Q494V2 611 aa12.27□□□□□ -0.44
PTCH1-206ENST00000421141 GRIPAP1Q4V328 841 aa12.27□□□□□ -0.44
PTCH1-206ENST00000421141 PIGBQ92521 554 aa12.27□□□□□ -0.44
PTCH1-206ENST00000421141 GPAA1O43292 621 aa12.27□□□□□ -0.44
PTCH1-206ENST00000421141 CC2D2BQ6DHV5 1058 aa12.27□□□□□ -0.44
PTCH1-206ENST00000421141 SPC24Q8NBT2 197 aa12.27□□□□□ -0.44
PTCH1-206ENST00000421141 AOX1Q06278 1338 aa12.27□□□□□ -0.44
PTCH1-206ENST00000421141 KIF4AO95239 1232 aa12.27□□□□□ -0.44
PTCH1-206ENST00000421141 CPSF1Q10570 1443 aaKnown RBP12.27□□□□□ -0.44
PTCH1-206ENST00000421141 ZYXQ15942 572 aaKnown RBP12.27□□□□□ -0.45
PTCH1-206ENST00000421141 JAKMIP3Q5VZ66 844 aa12.27□□□□□ -0.45
PTCH1-206ENST00000421141 LZTS2Q9BRK4 669 aa12.27□□□□□ -0.45
PTCH1-206ENST00000421141 PIM2Q9P1W9 311 aa12.27□□□□□ -0.45
PTCH1-206ENST00000421141 CAMK4Q16566 473 aa12.27□□□□□ -0.45
PTCH1-206ENST00000421141 C3P01024 1663 aa12.27□□□□□ -0.45
PTCH1-206ENST00000421141 ADRA2BP18089 450 aa12.27□□□□□ -0.45
PTCH1-206ENST00000421141 CREB3L3Q68CJ9 461 aa12.27□□□□□ -0.45
PTCH1-206ENST00000421141 DHX32Q7L7V1 743 aaKnown RBP12.27□□□□□ -0.45
PTCH1-206ENST00000421141 MMP10P09238 476 aa12.26□□□□□ -0.45
PTCH1-206ENST00000421141 VSIG10Q8N0Z9 540 aa12.26□□□□□ -0.45
PTCH1-206ENST00000421141 FSIP1Q8NA03 581 aa12.26□□□□□ -0.45
PTCH1-206ENST00000421141 DLC1Q96QB1 1528 aa12.26□□□□□ -0.45
PTCH1-206ENST00000421141 IQCEQ6IPM2 695 aa12.26□□□□□ -0.45
PTCH1-206ENST00000421141 KIAA0825Q8IV33 1275 aa12.26□□□□□ -0.45
PTCH1-206ENST00000421141 PTPDC1A2A3K4 754 aa12.26□□□□□ -0.45
PTCH1-206ENST00000421141 EPB41L2O43491 1005 aaKnown RBP12.26□□□□□ -0.45
PTCH1-206ENST00000421141 SUPT20HL1Q3ZLR7 823 aa12.26□□□□□ -0.45
PTCH1-206ENST00000421141 TCERG1LQ5VWI1 586 aa12.26□□□□□ -0.45
PTCH1-206ENST00000421141 ARPP21Q9UBL0 812 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-206ENST00000421141 CCDC183Q5T5S1 534 aa12.26□□□□□ -0.45
PTCH1-206ENST00000421141 KLHDC4Q8TBB5 520 aa12.26□□□□□ -0.45
PTCH1-206ENST00000421141 ANKRD62A6NC57 917 aa12.26□□□□□ -0.45
PTCH1-206ENST00000421141 KCNG4Q8TDN1 519 aa12.26□□□□□ -0.45
PTCH1-206ENST00000421141 ZBTB7BO15156 539 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-206ENST00000421141 KCNQ3O43525 872 aa12.26□□□□□ -0.45
PTCH1-206ENST00000421141 PRKCSHP14314 528 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-206ENST00000421141 GADL1Q6ZQY3 521 aa12.26□□□□□ -0.45
PTCH1-206ENST00000421141 TMEM87BQ96K49 555 aa12.26□□□□□ -0.45
PTCH1-206ENST00000421141 ZBTB1Q9Y2K1 713 aa12.26□□□□□ -0.45
PTCH1-206ENST00000421141 C1orf167Q5SNV9 1468 aa12.25□□□□□ -0.45
PTCH1-206ENST00000421141 VPS72Q15906 364 aa12.25□□□□□ -0.45
PTCH1-206ENST00000421141 GIGYF2Q6Y7W6 1299 aaKnown RBP12.25□□□□□ -0.45
PTCH1-206ENST00000421141 ZNF526Q8TF50 670 aaPredicted RBP12.25□□□□□ -0.45
PTCH1-206ENST00000421141 FBXO3Q9UK99 471 aa12.25□□□□□ -0.45
PTCH1-206ENST00000421141 ZNF532Q9HCE3 1301 aa12.25□□□□□ -0.45
PTCH1-206ENST00000421141 CHRNDQ07001 517 aa12.25□□□□□ -0.45
PTCH1-206ENST00000421141 CLEC4GQ6UXB4 293 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms