RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 PDE4CQ08493 712 aa17.31■□□□□ 0.36
SEMA4D-204ENST00000420101 NCBP1Q09161 790 aaKnown RBP17.31■□□□□ 0.36
SEMA4D-204ENST00000420101 CAVIN4Q5BKX8 364 aa17.31■□□□□ 0.36
SEMA4D-204ENST00000420101 RNF20Q5VTR2 975 aa17.31■□□□□ 0.36
SEMA4D-204ENST00000420101 ZSCAN25Q6NSZ9 544 aa17.31■□□□□ 0.36
SEMA4D-204ENST00000420101 NLGN1Q8N2Q7 840 aa17.31■□□□□ 0.36
SEMA4D-204ENST00000420101 TSC1Q92574 1164 aa17.31■□□□□ 0.36
SEMA4D-204ENST00000420101 UPF3BQ9BZI7 483 aaKnown RBP17.31■□□□□ 0.36
SEMA4D-204ENST00000420101 ANKRD2Q9GZV1 360 aa17.31■□□□□ 0.36
SEMA4D-204ENST00000420101 MED23Q9ULK4 1368 aa17.3■□□□□ 0.36
SEMA4D-204ENST00000420101 TCHHQ07283 1943 aa17.3■□□□□ 0.36
SEMA4D-204ENST00000420101 CAVIN2O95810 425 aa17.3■□□□□ 0.36
SEMA4D-204ENST00000420101 UBE4AQ14139 1066 aa17.3■□□□□ 0.36
SEMA4D-204ENST00000420101 EZH2Q15910 746 aaKnown RBP17.3■□□□□ 0.36
SEMA4D-204ENST00000420101 ZMYM1Q5SVZ6 1142 aa17.3■□□□□ 0.36
SEMA4D-204ENST00000420101 NOL8Q76FK4 1167 aaKnown RBP17.3■□□□□ 0.36
SEMA4D-204ENST00000420101 TICAM2Q86XR7 235 aa17.3■□□□□ 0.36
SEMA4D-204ENST00000420101 SPATA5Q8NB90 893 aa17.3■□□□□ 0.36
SEMA4D-204ENST00000420101 MAP4K1Q92918 833 aa17.3■□□□□ 0.36
SEMA4D-204ENST00000420101 KCNF1Q9H3M0 494 aa17.3■□□□□ 0.36
SEMA4D-204ENST00000420101 GNL3LQ9NVN8 582 aaKnown RBP17.3■□□□□ 0.36
SEMA4D-204ENST00000420101 TMEM51Q9NW97 253 aa17.3■□□□□ 0.36
SEMA4D-204ENST00000420101 SPDYE4A6NLX3 237 aa17.29■□□□□ 0.36
SEMA4D-204ENST00000420101 POLRMTO00411 1230 aaKnown RBP17.29■□□□□ 0.36
SEMA4D-204ENST00000420101 DDR1Q08345 913 aa17.29■□□□□ 0.36
SEMA4D-204ENST00000420101 GRAPQ13588 217 aa17.29■□□□□ 0.36
SEMA4D-204ENST00000420101 GRAPLQ8TC17 118 aaPredicted RBP17.29■□□□□ 0.36
SEMA4D-204ENST00000420101 RBM17Q96I25 401 aaKnown RBP17.29■□□□□ 0.36
SEMA4D-204ENST00000420101 HMG20BQ9P0W2 317 aa17.29■□□□□ 0.36
SEMA4D-204ENST00000420101 NEMFO60524 1076 aa17.28■□□□□ 0.36
SEMA4D-204ENST00000420101 CREB3L3Q68CJ9 461 aa17.28■□□□□ 0.36
SEMA4D-204ENST00000420101 RASEFQ8IZ41 740 aa17.28■□□□□ 0.36
SEMA4D-204ENST00000420101 FAM200AQ8TCP9 573 aa17.28■□□□□ 0.36
SEMA4D-204ENST00000420101 CALCOCO1Q9P1Z2 691 aa17.28■□□□□ 0.36
SEMA4D-204ENST00000420101 IQSEC3Q9UPP2 1182 aaPredicted RBP17.28■□□□□ 0.36
SEMA4D-204ENST00000420101 SLFN14P0C7P3 912 aa17.28■□□□□ 0.36
SEMA4D-204ENST00000420101 GYG1P46976 350 aa17.28■□□□□ 0.36
SEMA4D-204ENST00000420101 RASGRF1Q13972 1273 aa17.28■□□□□ 0.36
SEMA4D-204ENST00000420101 MSL1Q68DK7 614 aa17.28■□□□□ 0.36
SEMA4D-204ENST00000420101 KRT222Q8N1A0 295 aa17.28■□□□□ 0.36
SEMA4D-204ENST00000420101 JAKMIP1Q96N16 626 aaKnown RBP17.28■□□□□ 0.36
SEMA4D-204ENST00000420101 ANKIB1Q9P2G1 1089 aa17.28■□□□□ 0.36
SEMA4D-204ENST00000420101 PARP3Q9Y6F1 533 aa17.28■□□□□ 0.36
SEMA4D-204ENST00000420101 COL4A1P02462 1669 aa17.27■□□□□ 0.36
SEMA4D-204ENST00000420101 CASTP20810 708 aaKnown RBP17.27■□□□□ 0.36
SEMA4D-204ENST00000420101 CDK11BP21127 795 aaKnown RBP17.27■□□□□ 0.36
SEMA4D-204ENST00000420101 NECTIN1Q15223 517 aa17.27■□□□□ 0.36
SEMA4D-204ENST00000420101 SLC9C2Q5TAH2 1124 aa17.27■□□□□ 0.36
SEMA4D-204ENST00000420101 FOXD4L5Q5VV16 416 aaPredicted RBP17.27■□□□□ 0.36
SEMA4D-204ENST00000420101 CCDC112Q8NEF3 446 aa17.27■□□□□ 0.36
SEMA4D-204ENST00000420101 FOXD4L4Q8WXT5 416 aaPredicted RBP17.27■□□□□ 0.36
SEMA4D-204ENST00000420101 PIH1D3Q9NQM4 214 aaKnown RBP17.27■□□□□ 0.36
SEMA4D-204ENST00000420101 STK32BQ9NY57 414 aa17.27■□□□□ 0.36
SEMA4D-204ENST00000420101 PYCARDQ9ULZ3 195 aa17.27■□□□□ 0.36
SEMA4D-204ENST00000420101 U3KPZ7 1027 aaPredicted RBP17.27■□□□□ 0.36
SEMA4D-204ENST00000420101 MAST3O60307 1309 aa17.26■□□□□ 0.35
SEMA4D-204ENST00000420101 SLC27A2O14975 620 aa17.26■□□□□ 0.35
SEMA4D-204ENST00000420101 TERF2Q15554 542 aa17.26■□□□□ 0.35
SEMA4D-204ENST00000420101 ZNF397Q8NF99 534 aaPredicted RBP17.26■□□□□ 0.35
SEMA4D-204ENST00000420101 IPO4Q8TEX9 1081 aaKnown RBP17.26■□□□□ 0.35
SEMA4D-204ENST00000420101 APPBP2Q92624 585 aa17.26■□□□□ 0.35
SEMA4D-204ENST00000420101 PNPLA7Q6ZV29 1317 aa17.26■□□□□ 0.35
SEMA4D-204ENST00000420101 WTIPA6NIX2 430 aaPredicted RBP17.26■□□□□ 0.35
SEMA4D-204ENST00000420101 M0R2C6 588 aa17.26■□□□□ 0.35
SEMA4D-204ENST00000420101 STX6O43752 255 aa17.26■□□□□ 0.35
SEMA4D-204ENST00000420101 F13A1P00488 732 aa17.26■□□□□ 0.35
SEMA4D-204ENST00000420101 OSBP2Q969R2 916 aa17.26■□□□□ 0.35
SEMA4D-204ENST00000420101 TIGD1Q96MW7 591 aa17.26■□□□□ 0.35
SEMA4D-204ENST00000420101 FAM53CQ9NYF3 392 aa17.26■□□□□ 0.35
SEMA4D-204ENST00000420101 PSMA5P28066 241 aa17.25■□□□□ 0.35
SEMA4D-204ENST00000420101 BAG6P46379 1132 aa17.25■□□□□ 0.35
SEMA4D-204ENST00000420101 MAP3K12Q12852 859 aa17.25■□□□□ 0.35
SEMA4D-204ENST00000420101 KIF18AQ8NI77 898 aa17.25■□□□□ 0.35
SEMA4D-204ENST00000420101 CHAMP1Q96JM3 812 aa17.25■□□□□ 0.35
SEMA4D-204ENST00000420101 LRP2BPQ9P2M1 347 aa17.25■□□□□ 0.35
SEMA4D-204ENST00000420101 TAF1P21675 1872 aa17.25■□□□□ 0.35
SEMA4D-204ENST00000420101 KIF2AO00139 706 aaPredicted RBP17.24■□□□□ 0.35
SEMA4D-204ENST00000420101 MMP10P09238 476 aa17.24■□□□□ 0.35
SEMA4D-204ENST00000420101 CDC25BP30305 580 aa17.24■□□□□ 0.35
SEMA4D-204ENST00000420101 C17orf53Q8N3J3 647 aaPredicted RBP17.24■□□□□ 0.35
SEMA4D-204ENST00000420101 CAMKK2Q96RR4 588 aa17.24■□□□□ 0.35
SEMA4D-204ENST00000420101 CYP46A1Q9Y6A2 500 aa17.24■□□□□ 0.35
SEMA4D-204ENST00000420101 TNRC6CQ9HCJ0 1690 aaKnown RBP17.24■□□□□ 0.35
SEMA4D-204ENST00000420101 EP400Q96L91 3159 aa17.24■□□□□ 0.35
SEMA4D-204ENST00000420101 ZNF804BA4D1E1 1349 aa17.24■□□□□ 0.35
SEMA4D-204ENST00000420101 ELP1O95163 1332 aa17.24■□□□□ 0.35
SEMA4D-204ENST00000420101 ADD2P35612 726 aa17.24■□□□□ 0.35
SEMA4D-204ENST00000420101 SLC15A2Q16348 729 aa17.24■□□□□ 0.35
SEMA4D-204ENST00000420101 VPS53Q5VIR6 699 aa17.24■□□□□ 0.35
SEMA4D-204ENST00000420101 DSCC1Q9BVC3 393 aa17.24■□□□□ 0.35
SEMA4D-204ENST00000420101 ABCF2Q9UG63 623 aa17.24■□□□□ 0.35
SEMA4D-204ENST00000420101 CNPY2Q9Y2B0 182 aa17.24■□□□□ 0.35
SEMA4D-204ENST00000420101 TNS1Q9HBL0 1735 aaKnown RBP17.23■□□□□ 0.35
SEMA4D-204ENST00000420101 ZNF532Q9HCE3 1301 aa17.23■□□□□ 0.35
SEMA4D-204ENST00000420101 HSPD1P10809 573 aaKnown RBP17.23■□□□□ 0.35
SEMA4D-204ENST00000420101 CPA1P15085 419 aa17.23■□□□□ 0.35
SEMA4D-204ENST00000420101 ADCK5Q3MIX3 580 aa17.23■□□□□ 0.35
SEMA4D-204ENST00000420101 ZSCAN31Q96LW9 406 aaPredicted RBP17.23■□□□□ 0.35
SEMA4D-204ENST00000420101 PUS7LQ9H0K6 701 aaKnown RBP17.23■□□□□ 0.35
SEMA4D-204ENST00000420101 PDRG1Q9NUG6 133 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms