RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 ZNF333Q96JL9 665 aa13.03□□□□□ -0.32
TNFAIP3-202ENST00000420009 MS4A4AQ96JQ5 239 aa13.03□□□□□ -0.32
TNFAIP3-202ENST00000420009 FOXO4P98177 505 aa13.02□□□□□ -0.33
TNFAIP3-202ENST00000420009 IFIT5Q13325 482 aaKnown RBP13.02□□□□□ -0.33
TNFAIP3-202ENST00000420009 CCDC27Q2M243 656 aa13.02□□□□□ -0.33
TNFAIP3-202ENST00000420009 OPTNQ96CV9 577 aa13.02□□□□□ -0.33
TNFAIP3-202ENST00000420009 TEPSINQ96N21 525 aa13.02□□□□□ -0.33
TNFAIP3-202ENST00000420009 JAG2Q9Y219 1238 aa13.02□□□□□ -0.33
TNFAIP3-202ENST00000420009 FAM205AQ6ZU69 1335 aa13.02□□□□□ -0.33
TNFAIP3-202ENST00000420009 ARAP2Q8WZ64 1704 aa13.02□□□□□ -0.33
TNFAIP3-202ENST00000420009 FKBP5Q13451 457 aaPredicted RBP13.01□□□□□ -0.33
TNFAIP3-202ENST00000420009 TNFAIP1Q13829 316 aa13.01□□□□□ -0.33
TNFAIP3-202ENST00000420009 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.01□□□□□ -0.33
TNFAIP3-202ENST00000420009 CDAN1Q8IWY9 1227 aa13.01□□□□□ -0.33
TNFAIP3-202ENST00000420009 BRI3BPQ8WY22 251 aa13.01□□□□□ -0.33
TNFAIP3-202ENST00000420009 ELP3Q9H9T3 547 aa13.01□□□□□ -0.33
TNFAIP3-202ENST00000420009 IL16Q14005 1332 aa13□□□□□ -0.33
TNFAIP3-202ENST00000420009 WWC1Q8IX03 1113 aa13□□□□□ -0.33
TNFAIP3-202ENST00000420009 ZNF70Q9UC06 446 aaPredicted RBP13□□□□□ -0.33
TNFAIP3-202ENST00000420009 SERPINA10Q9UK55 444 aa13□□□□□ -0.33
TNFAIP3-202ENST00000420009 PTCH2Q9Y6C5 1203 aa13□□□□□ -0.33
TNFAIP3-202ENST00000420009 SZT2Q5T011 3432 aa13□□□□□ -0.33
TNFAIP3-202ENST00000420009 RBM5P52756 815 aaKnown RBP eCLIP12.99□□□□□ -0.33
TNFAIP3-202ENST00000420009 VGLL4Q14135 290 aa12.99□□□□□ -0.33
TNFAIP3-202ENST00000420009 SLC9C1Q4G0N8 1177 aa12.99□□□□□ -0.33
TNFAIP3-202ENST00000420009 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.99□□□□□ -0.33
TNFAIP3-202ENST00000420009 TDRD7Q8NHU6 1098 aaKnown RBP12.99□□□□□ -0.33
TNFAIP3-202ENST00000420009 TMEM106CQ9BVX2 250 aa12.99□□□□□ -0.33
TNFAIP3-202ENST00000420009 CCL15-CCL14A0A0B4J2E2 113 aa12.98□□□□□ -0.33
TNFAIP3-202ENST00000420009 TAF1CQ15572 869 aaPredicted RBP12.98□□□□□ -0.33
TNFAIP3-202ENST00000420009 CCL15Q16663 113 aa12.98□□□□□ -0.33
TNFAIP3-202ENST00000420009 EPHA10Q5JZY3 1008 aa12.98□□□□□ -0.33
TNFAIP3-202ENST00000420009 MFSD14BQ5SR56 506 aa12.98□□□□□ -0.33
TNFAIP3-202ENST00000420009 LMBR1LQ6UX01 489 aa12.98□□□□□ -0.33
TNFAIP3-202ENST00000420009 FAM43AQ8N2R8 423 aa12.98□□□□□ -0.33
TNFAIP3-202ENST00000420009 ZNF579Q8NAF0 562 aaKnown RBP12.98□□□□□ -0.33
TNFAIP3-202ENST00000420009 TDRD3Q9H7E2 651 aaKnown RBP12.98□□□□□ -0.33
TNFAIP3-202ENST00000420009 ZFYVE28Q9HCC9 887 aa12.98□□□□□ -0.33
TNFAIP3-202ENST00000420009 TTF2Q9UNY4 1162 aaKnown RBP12.98□□□□□ -0.33
TNFAIP3-202ENST00000420009 CHMP3Q9Y3E7 222 aa12.98□□□□□ -0.33
TNFAIP3-202ENST00000420009 FANCIQ9NVI1 1328 aa12.97□□□□□ -0.33
TNFAIP3-202ENST00000420009 SPDYE5A6NIY4 337 aa12.97□□□□□ -0.33
TNFAIP3-202ENST00000420009 GTF2A2P52657 109 aa12.97□□□□□ -0.33
TNFAIP3-202ENST00000420009 ARHGEF6Q15052 776 aa12.97□□□□□ -0.33
TNFAIP3-202ENST00000420009 BEND3Q5T5X7 828 aa12.97□□□□□ -0.33
TNFAIP3-202ENST00000420009 LDHAL6AQ6ZMR3 332 aa12.97□□□□□ -0.33
TNFAIP3-202ENST00000420009 NBPF11Q86T75 865 aa12.97□□□□□ -0.33
TNFAIP3-202ENST00000420009 DZIP1LQ8IYY4 767 aaKnown RBP12.97□□□□□ -0.33
TNFAIP3-202ENST00000420009 ZNF594Q96JF6 807 aaPredicted RBP12.97□□□□□ -0.33
TNFAIP3-202ENST00000420009 TMEM39BQ9GZU3 492 aa12.97□□□□□ -0.33
TNFAIP3-202ENST00000420009 COLQQ9Y215 455 aaPredicted RBP12.97□□□□□ -0.33
TNFAIP3-202ENST00000420009 RANBP2P49792 3224 aaKnown RBP12.97□□□□□ -0.33
TNFAIP3-202ENST00000420009 CACNA1FO60840 1977 aa12.96□□□□□ -0.33
TNFAIP3-202ENST00000420009 F6X3S4 739 aa12.96□□□□□ -0.33
TNFAIP3-202ENST00000420009 CRKP46108 304 aa12.96□□□□□ -0.33
TNFAIP3-202ENST00000420009 MAP3K9P80192 1104 aa12.96□□□□□ -0.33
TNFAIP3-202ENST00000420009 UBE4AQ14139 1066 aa12.96□□□□□ -0.33
TNFAIP3-202ENST00000420009 CCDC57Q2TAC2 916 aa12.96□□□□□ -0.33
TNFAIP3-202ENST00000420009 OTUD5Q96G74 571 aa12.96□□□□□ -0.33
TNFAIP3-202ENST00000420009 ZCCHC17Q9NP64 241 aaKnown RBP12.96□□□□□ -0.33
TNFAIP3-202ENST00000420009 CNNM1Q9NRU3 951 aa12.96□□□□□ -0.33
TNFAIP3-202ENST00000420009 CSADQ9Y600 493 aa12.96□□□□□ -0.33
TNFAIP3-202ENST00000420009 ZSWIM8A7E2V4 1837 aa12.96□□□□□ -0.33
TNFAIP3-202ENST00000420009 TCP10L2B9ZVM9 353 aa12.95□□□□□ -0.34
TNFAIP3-202ENST00000420009 GRM8O00222 908 aa12.95□□□□□ -0.34
TNFAIP3-202ENST00000420009 PLIN1O60240 522 aa12.95□□□□□ -0.34
TNFAIP3-202ENST00000420009 TLR2O60603 784 aa12.95□□□□□ -0.34
TNFAIP3-202ENST00000420009 VAMP4O75379 141 aa12.95□□□□□ -0.34
TNFAIP3-202ENST00000420009 HIBADHP31937 336 aaKnown RBP12.95□□□□□ -0.34
TNFAIP3-202ENST00000420009 GYG1P46976 350 aa12.95□□□□□ -0.34
TNFAIP3-202ENST00000420009 TAF7LQ5H9L4 462 aa12.95□□□□□ -0.34
TNFAIP3-202ENST00000420009 FAM84BQ96KN1 310 aaPredicted RBP12.95□□□□□ -0.34
TNFAIP3-202ENST00000420009 ARHGAP39Q9C0H5 1083 aa12.95□□□□□ -0.34
TNFAIP3-202ENST00000420009 SNCAIPQ9Y6H5 919 aa12.95□□□□□ -0.34
TNFAIP3-202ENST00000420009 H0YGN5 161 aa12.94□□□□□ -0.34
TNFAIP3-202ENST00000420009 TNNI2P48788 182 aa12.94□□□□□ -0.34
TNFAIP3-202ENST00000420009 LACTBP83111 547 aaPredicted RBP12.94□□□□□ -0.34
TNFAIP3-202ENST00000420009 GRIK5Q16478 980 aa12.94□□□□□ -0.34
TNFAIP3-202ENST00000420009 SLC4A8Q2Y0W8 1093 aa12.94□□□□□ -0.34
TNFAIP3-202ENST00000420009 SH3TC2Q8TF17 1288 aa12.94□□□□□ -0.34
TNFAIP3-202ENST00000420009 BTBD19C9JJ37 291 aa12.93□□□□□ -0.34
TNFAIP3-202ENST00000420009 CETPP11597 493 aa12.93□□□□□ -0.34
TNFAIP3-202ENST00000420009 HDLBPQ00341 1268 aaKnown RBP12.93□□□□□ -0.34
TNFAIP3-202ENST00000420009 CCDC184Q52MB2 194 aa12.93□□□□□ -0.34
TNFAIP3-202ENST00000420009 ERO1BQ86YB8 467 aa12.93□□□□□ -0.34
TNFAIP3-202ENST00000420009 SHISA4Q96DD7 197 aa12.93□□□□□ -0.34
TNFAIP3-202ENST00000420009 RPAP1Q9BWH6 1393 aaPredicted RBP12.93□□□□□ -0.34
TNFAIP3-202ENST00000420009 IRF6O14896 467 aa12.92□□□□□ -0.34
TNFAIP3-202ENST00000420009 WDHD1O75717 1129 aaPredicted RBP12.92□□□□□ -0.34
TNFAIP3-202ENST00000420009 GNRH1P01148 92 aa12.92□□□□□ -0.34
TNFAIP3-202ENST00000420009 PRMT2P55345 433 aa12.92□□□□□ -0.34
TNFAIP3-202ENST00000420009 PPIL2Q13356 520 aa12.92□□□□□ -0.34
TNFAIP3-202ENST00000420009 FBXO33Q7Z6M2 555 aa12.92□□□□□ -0.34
TNFAIP3-202ENST00000420009 KAZALD1Q96I82 304 aa12.92□□□□□ -0.34
TNFAIP3-202ENST00000420009 WRNIP1Q96S55 665 aa12.92□□□□□ -0.34
TNFAIP3-202ENST00000420009 PUS3Q9BZE2 481 aaKnown RBP12.92□□□□□ -0.34
TNFAIP3-202ENST00000420009 TRIOBPQ9H2D6 2365 aa12.92□□□□□ -0.34
TNFAIP3-202ENST00000420009 MYCP01106 439 aaPredicted RBP12.91□□□□□ -0.34
TNFAIP3-202ENST00000420009 CACNB3P54284 484 aa12.91□□□□□ -0.34
TNFAIP3-202ENST00000420009 EXOSC9Q06265 439 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms