RNA–Protein interactions for RNA: ENST00000419023.2

VPS45-203, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 3

Gene VPS45, Length 977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-203ENST00000419023 GADD45BO75293 160 aaPredicted RBP8.6□□□□□ -1.03
VPS45-203ENST00000419023 PTPRAP18433 802 aa8.6□□□□□ -1.03
VPS45-203ENST00000419023 CDC27P30260 824 aa8.6□□□□□ -1.03
VPS45-203ENST00000419023 KCNMA1Q12791 1236 aa8.6□□□□□ -1.03
VPS45-203ENST00000419023 KIAA0319Q5VV43 1072 aa8.6□□□□□ -1.03
VPS45-203ENST00000419023 NPAS4Q8IUM7 802 aa8.6□□□□□ -1.03
VPS45-203ENST00000419023 ASAP3Q8TDY4 903 aa8.6□□□□□ -1.03
VPS45-203ENST00000419023 LIN7BQ9HAP6 207 aa8.6□□□□□ -1.03
VPS45-203ENST00000419023 SH2B1Q9NRF2 756 aaPredicted RBP8.6□□□□□ -1.03
VPS45-203ENST00000419023 C9orf84Q5VXU9 1444 aa8.6□□□□□ -1.03
VPS45-203ENST00000419023 FER1L4A9Z1Z3 1794 aa8.6□□□□□ -1.03
VPS45-203ENST00000419023 TTC37Q6PGP7 1564 aa8.6□□□□□ -1.03
VPS45-203ENST00000419023 RICTORQ6R327 1708 aa8.6□□□□□ -1.03
VPS45-203ENST00000419023 ZMYM4Q5VZL5 1548 aa8.59□□□□□ -1.03
VPS45-203ENST00000419023 PREX1Q8TCU6 1659 aa8.59□□□□□ -1.03
VPS45-203ENST00000419023 A0A0A0MRY4 1105 aa8.59□□□□□ -1.03
VPS45-203ENST00000419023 FAM177BA6PVY3 158 aa8.59□□□□□ -1.03
VPS45-203ENST00000419023 METTL12A8MUP2 240 aa8.59□□□□□ -1.03
VPS45-203ENST00000419023 CDC25BP30305 580 aa8.59□□□□□ -1.03
VPS45-203ENST00000419023 TRIM28Q13263 835 aaKnown RBP8.59□□□□□ -1.03
VPS45-203ENST00000419023 TXNDC11Q6PKC3 985 aa8.59□□□□□ -1.03
VPS45-203ENST00000419023 CACTIN-AS1Q8N1I8 211 aa8.59□□□□□ -1.03
VPS45-203ENST00000419023 NLRP2Q9NX02 1062 aa8.59□□□□□ -1.03
VPS45-203ENST00000419023 NUP153P49790 1475 aaKnown RBP8.58□□□□□ -1.04
VPS45-203ENST00000419023 LINC01387J3KSC0 135 aa8.58□□□□□ -1.04
VPS45-203ENST00000419023 LDHBP07195 334 aaKnown RBP8.58□□□□□ -1.04
VPS45-203ENST00000419023 GSK3AP49840 483 aa8.58□□□□□ -1.04
VPS45-203ENST00000419023 MFAP1P55081 439 aaKnown RBP8.58□□□□□ -1.04
VPS45-203ENST00000419023 ATP2B2Q01814 1243 aa8.58□□□□□ -1.04
VPS45-203ENST00000419023 RASSF7Q02833 373 aa8.58□□□□□ -1.04
VPS45-203ENST00000419023 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.58□□□□□ -1.04
VPS45-203ENST00000419023 PRRT3Q5FWE3 981 aa8.58□□□□□ -1.04
VPS45-203ENST00000419023 CCNJLQ8IV13 435 aa8.58□□□□□ -1.04
VPS45-203ENST00000419023 TCF12Q99081 682 aa8.58□□□□□ -1.04
VPS45-203ENST00000419023 BHLHE41Q9C0J9 482 aaPredicted RBP8.58□□□□□ -1.04
VPS45-203ENST00000419023 ADAM19Q9H013 955 aa8.58□□□□□ -1.04
VPS45-203ENST00000419023 PPME1Q9Y570 386 aa8.58□□□□□ -1.04
VPS45-203ENST00000419023 HECW1Q76N89 1606 aa8.58□□□□□ -1.04
VPS45-203ENST00000419023 EPHA1P21709 976 aa8.57□□□□□ -1.04
VPS45-203ENST00000419023 RAC1P63000 192 aa8.57□□□□□ -1.04
VPS45-203ENST00000419023 EAPPQ56P03 285 aaPredicted RBP8.57□□□□□ -1.04
VPS45-203ENST00000419023 SETD1BQ9UPS6 1966 aaKnown RBP8.57□□□□□ -1.04
VPS45-203ENST00000419023 IQSEC2Q5JU85 1478 aa8.57□□□□□ -1.04
VPS45-203ENST00000419023 PLCH2O75038 1416 aa8.56□□□□□ -1.04
VPS45-203ENST00000419023 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.56□□□□□ -1.04
VPS45-203ENST00000419023 ARHGEF12Q9NZN5 1544 aa8.56□□□□□ -1.04
VPS45-203ENST00000419023 GRIA4P48058 902 aa8.56□□□□□ -1.04
VPS45-203ENST00000419023 GRM2Q14416 872 aa8.56□□□□□ -1.04
VPS45-203ENST00000419023 COL19A1Q14993 1142 aa8.56□□□□□ -1.04
VPS45-203ENST00000419023 SPRED3Q2MJR0 410 aa8.56□□□□□ -1.04
VPS45-203ENST00000419023 ALG1LQ6GMV1 187 aa8.56□□□□□ -1.04
VPS45-203ENST00000419023 FMR1NBQ8N0W7 255 aaPredicted RBP8.56□□□□□ -1.04
VPS45-203ENST00000419023 BSNDQ8WZ55 320 aa8.56□□□□□ -1.04
VPS45-203ENST00000419023 MUC3BQ9H195 1237 aa8.56□□□□□ -1.04
VPS45-203ENST00000419023 SOX13Q9UN79 622 aa8.56□□□□□ -1.04
VPS45-203ENST00000419023 A0A096LPE4 126 aa8.55□□□□□ -1.04
VPS45-203ENST00000419023 A0A1W2PPZ6 126 aa8.55□□□□□ -1.04
VPS45-203ENST00000419023 DEAF1O75398 565 aaPredicted RBP8.55□□□□□ -1.04
VPS45-203ENST00000419023 ERCC3P19447 782 aa8.55□□□□□ -1.04
VPS45-203ENST00000419023 CABP4P57796 275 aa8.55□□□□□ -1.04
VPS45-203ENST00000419023 DTWD1Q8N5C7 304 aa8.55□□□□□ -1.04
VPS45-203ENST00000419023 FBF1Q8TES7 1133 aa8.55□□□□□ -1.04
VPS45-203ENST00000419023 DCAF5Q96JK2 942 aa8.55□□□□□ -1.04
VPS45-203ENST00000419023 SAMD9Q5K651 1589 aa8.55□□□□□ -1.04
VPS45-203ENST00000419023 TRAPPC8Q9Y2L5 1435 aa8.54□□□□□ -1.04
VPS45-203ENST00000419023 ZNF518AQ6AHZ1 1483 aa8.54□□□□□ -1.04
VPS45-203ENST00000419023 GDF11O95390 407 aa8.54□□□□□ -1.04
VPS45-203ENST00000419023 SPATA31C1P0DKV0 1188 aa8.54□□□□□ -1.04
VPS45-203ENST00000419023 SETDB1Q15047 1291 aa8.54□□□□□ -1.04
VPS45-203ENST00000419023 GRIK4Q16099 956 aa8.54□□□□□ -1.04
VPS45-203ENST00000419023 VN1R5Q7Z5H4 357 aa8.54□□□□□ -1.04
VPS45-203ENST00000419023 AFAP1Q8N556 730 aa8.54□□□□□ -1.04
VPS45-203ENST00000419023 BCO2Q9BYV7 579 aa8.54□□□□□ -1.04
VPS45-203ENST00000419023 TRAK1Q9UPV9 953 aa8.54□□□□□ -1.04
VPS45-203ENST00000419023 H3BRJ5 948 aa8.53□□□□□ -1.04
VPS45-203ENST00000419023 FAM117BQ6P1L5 589 aa8.53□□□□□ -1.04
VPS45-203ENST00000419023 NXPE4Q6UWF7 544 aa8.53□□□□□ -1.04
VPS45-203ENST00000419023 ALYREFQ86V81 257 aaKnown RBP8.53□□□□□ -1.04
VPS45-203ENST00000419023 FBXO11Q86XK2 927 aa8.53□□□□□ -1.04
VPS45-203ENST00000419023 GLIS3Q8NEA6 775 aa8.53□□□□□ -1.04
VPS45-203ENST00000419023 CARD10Q9BWT7 1032 aa8.53□□□□□ -1.04
VPS45-203ENST00000419023 ABCB6Q9NP58 842 aa8.53□□□□□ -1.04
VPS45-203ENST00000419023 RNF19AQ9NV58 838 aa8.53□□□□□ -1.04
VPS45-203ENST00000419023 CNTLNQ9NXG0 1405 aa8.53□□□□□ -1.04
VPS45-203ENST00000419023 TMEM238LA0A1B0GVL6 79 aa8.52□□□□□ -1.05
VPS45-203ENST00000419023 KRBA1A5PL33 1030 aa8.52□□□□□ -1.05
VPS45-203ENST00000419023 TOM1O60784 492 aa8.52□□□□□ -1.05
VPS45-203ENST00000419023 PRPF40AO75400 957 aaKnown RBP8.52□□□□□ -1.05
VPS45-203ENST00000419023 ELNP15502 786 aa8.52□□□□□ -1.05
VPS45-203ENST00000419023 TAGLNQ01995 201 aaKnown RBP8.52□□□□□ -1.05
VPS45-203ENST00000419023 PRPF40BQ6NWY9 871 aaKnown RBP8.52□□□□□ -1.05
VPS45-203ENST00000419023 FBXO33Q7Z6M2 555 aa8.52□□□□□ -1.05
VPS45-203ENST00000419023 NPM2Q86SE8 214 aaKnown RBP8.52□□□□□ -1.05
VPS45-203ENST00000419023 TMEM151AQ8N4L1 468 aa8.52□□□□□ -1.05
VPS45-203ENST00000419023 SLC7A3Q8WY07 619 aa8.52□□□□□ -1.05
VPS45-203ENST00000419023 DUSP9Q99956 384 aaKnown RBP8.52□□□□□ -1.05
VPS45-203ENST00000419023 STRCQ7RTU9 1775 aa8.52□□□□□ -1.05
VPS45-203ENST00000419023 CLIP1P30622 1438 aa8.52□□□□□ -1.05
VPS45-203ENST00000419023 FSCN2O14926 492 aa8.51□□□□□ -1.05
VPS45-203ENST00000419023 FCGRTP55899 365 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms