RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 NCOA7Q8NI08 942 aa17.59■□□□□ 0.41
SEMA3B-203ENST00000419007 ERO1AQ96HE7 468 aa17.59■□□□□ 0.41
SEMA3B-203ENST00000419007 GPR108Q9NPR9 543 aa17.59■□□□□ 0.41
SEMA3B-203ENST00000419007 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.59■□□□□ 0.41
SEMA3B-203ENST00000419007 ATP1A3P13637 1013 aa17.58■□□□□ 0.41
SEMA3B-203ENST00000419007 LRRFIP1Q32MZ4 808 aaKnown RBP17.58■□□□□ 0.41
SEMA3B-203ENST00000419007 YEATS4O95619 227 aa17.58■□□□□ 0.4
SEMA3B-203ENST00000419007 POLR3EQ9NVU0 708 aa17.58■□□□□ 0.4
SEMA3B-203ENST00000419007 HPS5Q9UPZ3 1129 aa17.58■□□□□ 0.4
SEMA3B-203ENST00000419007 TRDNQ13061 729 aa17.57■□□□□ 0.4
SEMA3B-203ENST00000419007 PPP1R13BQ96KQ4 1090 aa17.57■□□□□ 0.4
SEMA3B-203ENST00000419007 OSBPL5Q9H0X9 879 aaPredicted RBP17.57■□□□□ 0.4
SEMA3B-203ENST00000419007 DENND2AQ9ULE3 1009 aa17.57■□□□□ 0.4
SEMA3B-203ENST00000419007 SERPINC1P01008 464 aa17.57■□□□□ 0.4
SEMA3B-203ENST00000419007 HSP90AA4PQ58FG1 418 aa17.57■□□□□ 0.4
SEMA3B-203ENST00000419007 CCDC150Q8NCX0 1101 aa17.57■□□□□ 0.4
SEMA3B-203ENST00000419007 IMPACTQ9P2X3 320 aa17.57■□□□□ 0.4
SEMA3B-203ENST00000419007 NLRP12P59046 1061 aa17.57■□□□□ 0.4
SEMA3B-203ENST00000419007 PIP4K2BP78356 416 aa17.57■□□□□ 0.4
SEMA3B-203ENST00000419007 ERCC6LQ2NKX8 1250 aa17.57■□□□□ 0.4
SEMA3B-203ENST00000419007 BRINP3Q76B58 766 aa17.57■□□□□ 0.4
SEMA3B-203ENST00000419007 BRAPQ7Z569 592 aa17.57■□□□□ 0.4
SEMA3B-203ENST00000419007 GPAA1O43292 621 aa17.56■□□□□ 0.4
SEMA3B-203ENST00000419007 KIF20AO95235 890 aa17.56■□□□□ 0.4
SEMA3B-203ENST00000419007 SYKP43405 635 aa17.56■□□□□ 0.4
SEMA3B-203ENST00000419007 FANCCQ00597 558 aa17.56■□□□□ 0.4
SEMA3B-203ENST00000419007 CCDC191Q8NCU4 936 aa17.56■□□□□ 0.4
SEMA3B-203ENST00000419007 STRCP1A6NGW2 1772 aa17.56■□□□□ 0.4
SEMA3B-203ENST00000419007 FOXP2O15409 715 aa17.56■□□□□ 0.4
SEMA3B-203ENST00000419007 WDHD1O75717 1129 aaPredicted RBP17.56■□□□□ 0.4
SEMA3B-203ENST00000419007 ANTXR2P58335 489 aa17.56■□□□□ 0.4
SEMA3B-203ENST00000419007 KIF23Q02241 960 aaPredicted RBP17.56■□□□□ 0.4
SEMA3B-203ENST00000419007 PHKBQ93100 1093 aa17.56■□□□□ 0.4
SEMA3B-203ENST00000419007 FAM89AQ96GI7 184 aa17.56■□□□□ 0.4
SEMA3B-203ENST00000419007 KIF2AO00139 706 aaPredicted RBP17.55■□□□□ 0.4
SEMA3B-203ENST00000419007 CFAP100Q494V2 611 aa17.55■□□□□ 0.4
SEMA3B-203ENST00000419007 MICU3Q86XE3 530 aa17.55■□□□□ 0.4
SEMA3B-203ENST00000419007 MB21D2Q8IYB1 491 aaPredicted RBP17.55■□□□□ 0.4
SEMA3B-203ENST00000419007 KRT222Q8N1A0 295 aa17.55■□□□□ 0.4
SEMA3B-203ENST00000419007 ALG1Q9BT22 464 aa17.55■□□□□ 0.4
SEMA3B-203ENST00000419007 GOLGA8FQ08AF8 430 aa17.55■□□□□ 0.4
SEMA3B-203ENST00000419007 GOLGA8DPQ0D2H9 430 aa17.55■□□□□ 0.4
SEMA3B-203ENST00000419007 FAM177A1Q8N128 213 aaPredicted RBP17.55■□□□□ 0.4
SEMA3B-203ENST00000419007 SCN11AQ9UI33 1791 aa17.55■□□□□ 0.4
SEMA3B-203ENST00000419007 MROH7-TTC4A0A0A0MT08 1334 aa17.55■□□□□ 0.4
SEMA3B-203ENST00000419007 LRRN4CLQ8ND94 238 aa17.55■□□□□ 0.4
SEMA3B-203ENST00000419007 STK11IPQ8N1F8 1099 aa17.54■□□□□ 0.4
SEMA3B-203ENST00000419007 APPBP2Q92624 585 aa17.54■□□□□ 0.4
SEMA3B-203ENST00000419007 DNAI1Q9UI46 699 aa17.54■□□□□ 0.4
SEMA3B-203ENST00000419007 ZFYP08048 801 aaPredicted RBP17.54■□□□□ 0.4
SEMA3B-203ENST00000419007 CMA1P23946 247 aa17.54■□□□□ 0.4
SEMA3B-203ENST00000419007 UBASH3AP57075 661 aa17.54■□□□□ 0.4
SEMA3B-203ENST00000419007 PNOCQ13519 176 aa17.54■□□□□ 0.4
SEMA3B-203ENST00000419007 AXDND1Q5T1B0 1012 aaPredicted RBP17.54■□□□□ 0.4
SEMA3B-203ENST00000419007 CLIC6Q96NY7 704 aa17.54■□□□□ 0.4
SEMA3B-203ENST00000419007 AKAP2Q9Y2D5 859 aa17.54■□□□□ 0.4
SEMA3B-203ENST00000419007 MORC2Q9Y6X9 1032 aaPredicted RBP17.54■□□□□ 0.4
SEMA3B-203ENST00000419007 IDH1O75874 414 aaKnown RBP17.53■□□□□ 0.4
SEMA3B-203ENST00000419007 METAP2P50579 478 aaKnown RBP eCLIP17.53■□□□□ 0.4
SEMA3B-203ENST00000419007 NFXL1Q6ZNB6 911 aa17.53■□□□□ 0.4
SEMA3B-203ENST00000419007 VPS37DQ86XT2 251 aa17.53■□□□□ 0.4
SEMA3B-203ENST00000419007 MYH15Q9Y2K3 1946 aa17.53■□□□□ 0.4
SEMA3B-203ENST00000419007 MST1RQ04912 1400 aa17.53■□□□□ 0.4
SEMA3B-203ENST00000419007 ARFGEF2Q9Y6D5 1785 aa17.53■□□□□ 0.4
SEMA3B-203ENST00000419007 EVCP57679 992 aa17.53■□□□□ 0.4
SEMA3B-203ENST00000419007 NCAPHQ15003 741 aa17.53■□□□□ 0.4
SEMA3B-203ENST00000419007 MYL10Q9BUA6 226 aa17.53■□□□□ 0.4
SEMA3B-203ENST00000419007 CIAO1O76071 339 aa17.53■□□□□ 0.4
SEMA3B-203ENST00000419007 NEDD4P46934 1319 aa17.52■□□□□ 0.4
SEMA3B-203ENST00000419007 SLC9C2Q5TAH2 1124 aa17.52■□□□□ 0.4
SEMA3B-203ENST00000419007 DPF2Q92785 391 aa17.52■□□□□ 0.4
SEMA3B-203ENST00000419007 METTL24Q5JXM2 366 aa17.52■□□□□ 0.4
SEMA3B-203ENST00000419007 SPECC1Q5M775 1068 aa17.52■□□□□ 0.4
SEMA3B-203ENST00000419007 BPIFA3Q9BQP9 254 aa17.52■□□□□ 0.4
SEMA3B-203ENST00000419007 ST7Q9NRC1 585 aa17.52■□□□□ 0.4
SEMA3B-203ENST00000419007 IFIT5Q13325 482 aaKnown RBP17.52■□□□□ 0.39
SEMA3B-203ENST00000419007 SLC39A14Q15043 492 aa17.52■□□□□ 0.39
SEMA3B-203ENST00000419007 KRT40Q6A162 431 aa17.52■□□□□ 0.39
SEMA3B-203ENST00000419007 TOM1L2Q6ZVM7 507 aa17.52■□□□□ 0.39
SEMA3B-203ENST00000419007 SYNE4Q8N205 404 aa17.52■□□□□ 0.39
SEMA3B-203ENST00000419007 B4E1Z4 1266 aa17.51■□□□□ 0.39
SEMA3B-203ENST00000419007 CPLX2Q6PUV4 134 aaKnown RBP17.51■□□□□ 0.39
SEMA3B-203ENST00000419007 UTP14AQ9BVJ6 771 aaKnown RBP17.51■□□□□ 0.39
SEMA3B-203ENST00000419007 SENP2Q9HC62 589 aa17.51■□□□□ 0.39
SEMA3B-203ENST00000419007 ANGEL1Q9UNK9 670 aaKnown RBP17.51■□□□□ 0.39
SEMA3B-203ENST00000419007 TRIM29Q14134 588 aa17.51■□□□□ 0.39
SEMA3B-203ENST00000419007 NKX2-3Q8TAU0 364 aa17.51■□□□□ 0.39
SEMA3B-203ENST00000419007 TMX1Q9H3N1 280 aa17.51■□□□□ 0.39
SEMA3B-203ENST00000419007 URI1O94763 535 aaPredicted RBP17.5■□□□□ 0.39
SEMA3B-203ENST00000419007 GABPB1Q06547 395 aaPredicted RBP17.5■□□□□ 0.39
SEMA3B-203ENST00000419007 ARHGAP29Q52LW3 1261 aa17.5■□□□□ 0.39
SEMA3B-203ENST00000419007 OLFM4Q6UX06 510 aa17.5■□□□□ 0.39
SEMA3B-203ENST00000419007 PDILTQ8N807 584 aa17.5■□□□□ 0.39
SEMA3B-203ENST00000419007 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.5■□□□□ 0.39
SEMA3B-203ENST00000419007 ADAMTS7Q9UKP4 1686 aa17.5■□□□□ 0.39
SEMA3B-203ENST00000419007 PSDA5PKW4 1024 aaPredicted RBP17.5■□□□□ 0.39
SEMA3B-203ENST00000419007 GPTP24298 496 aa17.5■□□□□ 0.39
SEMA3B-203ENST00000419007 MYL5Q02045 173 aa17.5■□□□□ 0.39
SEMA3B-203ENST00000419007 SHC4Q6S5L8 630 aa17.5■□□□□ 0.39
SEMA3B-203ENST00000419007 CYB5R4Q7L1T6 521 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms