RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 GGA3Q9NZ52 723 aa22.9■■□□□ 1.26
PTCD3-204ENST00000418628 PCDHAC2Q9Y5I4 1007 aa22.9■■□□□ 1.26
PTCD3-204ENST00000418628 AOX1Q06278 1338 aa22.89■■□□□ 1.26
PTCD3-204ENST00000418628 OTOFQ9HC10 1997 aa22.89■■□□□ 1.26
PTCD3-204ENST00000418628 AK9Q5TCS8 1911 aa22.89■■□□□ 1.25
PTCD3-204ENST00000418628 PRDX5P30044 214 aa22.89■■□□□ 1.25
PTCD3-204ENST00000418628 CFAP100Q494V2 611 aa22.89■■□□□ 1.25
PTCD3-204ENST00000418628 GORABQ5T7V8 394 aa22.89■■□□□ 1.25
PTCD3-204ENST00000418628 SPATA5Q8NB90 893 aa22.89■■□□□ 1.25
PTCD3-204ENST00000418628 LAMB1P07942 1786 aa22.89■■□□□ 1.25
PTCD3-204ENST00000418628 APBB1O00213 710 aa22.88■■□□□ 1.25
PTCD3-204ENST00000418628 CCDC158Q5M9N0 1113 aa22.88■■□□□ 1.25
PTCD3-204ENST00000418628 ZGPATQ8N5A5 531 aaKnown RBP22.88■■□□□ 1.25
PTCD3-204ENST00000418628 CRKP46108 304 aa22.87■■□□□ 1.25
PTCD3-204ENST00000418628 TTC39AQ5SRH9 613 aa22.87■■□□□ 1.25
PTCD3-204ENST00000418628 DLGAP5Q15398 846 aa22.86■■□□□ 1.25
PTCD3-204ENST00000418628 ANGEL2Q5VTE6 544 aaKnown RBP22.86■■□□□ 1.25
PTCD3-204ENST00000418628 HHIPL2Q6UWX4 724 aa22.86■■□□□ 1.25
PTCD3-204ENST00000418628 PRMT6Q96LA8 375 aaPredicted RBP22.86■■□□□ 1.25
PTCD3-204ENST00000418628 GLIS2Q9BZE0 524 aaPredicted RBP22.86■■□□□ 1.25
PTCD3-204ENST00000418628 THSD7BQ9C0I4 1608 aa22.86■■□□□ 1.25
PTCD3-204ENST00000418628 SMARCA5O60264 1052 aaPredicted RBP22.85■■□□□ 1.25
PTCD3-204ENST00000418628 APLP1P51693 650 aa22.85■■□□□ 1.25
PTCD3-204ENST00000418628 CDC37L1Q7L3B6 337 aa22.85■■□□□ 1.25
PTCD3-204ENST00000418628 ZNF384Q8TF68 577 aa22.85■■□□□ 1.25
PTCD3-204ENST00000418628 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.85■■□□□ 1.25
PTCD3-204ENST00000418628 ZDHHC15Q96MV8 337 aa22.85■■□□□ 1.25
PTCD3-204ENST00000418628 GAKO14976 1311 aa22.84■■□□□ 1.25
PTCD3-204ENST00000418628 TRAF5O00463 557 aa22.84■■□□□ 1.25
PTCD3-204ENST00000418628 LDHBP07195 334 aaKnown RBP22.84■■□□□ 1.25
PTCD3-204ENST00000418628 IRX6P78412 446 aaPredicted RBP22.84■■□□□ 1.25
PTCD3-204ENST00000418628 TEKT1Q969V4 418 aa22.84■■□□□ 1.25
PTCD3-204ENST00000418628 CEP350Q5VT06 3117 aa22.84■■□□□ 1.25
PTCD3-204ENST00000418628 CYP2E1P05181 493 aaPredicted RBP22.83■■□□□ 1.25
PTCD3-204ENST00000418628 IFIT2P09913 472 aaKnown RBP22.83■■□□□ 1.25
PTCD3-204ENST00000418628 FMR1Q06787 632 aaKnown RBP eCLIP22.83■■□□□ 1.25
PTCD3-204ENST00000418628 SPDYE2Q495Y8 402 aa22.83■■□□□ 1.25
PTCD3-204ENST00000418628 KRT26Q7Z3Y9 468 aa22.83■■□□□ 1.25
PTCD3-204ENST00000418628 SMC5Q8IY18 1101 aa22.83■■□□□ 1.25
PTCD3-204ENST00000418628 DCPSQ96C86 337 aaKnown RBP22.83■■□□□ 1.25
PTCD3-204ENST00000418628 GCC1Q96CN9 775 aa22.83■■□□□ 1.25
PTCD3-204ENST00000418628 RFX7Q2KHR2 1363 aa22.83■■□□□ 1.25
PTCD3-204ENST00000418628 DDX60LQ5H9U9 1706 aaKnown RBP22.82■■□□□ 1.24
PTCD3-204ENST00000418628 MYH1P12882 1939 aa22.82■■□□□ 1.24
PTCD3-204ENST00000418628 ADM5C9JUS6 153 aa22.82■■□□□ 1.24
PTCD3-204ENST00000418628 IGSF3O75054 1194 aa22.82■■□□□ 1.24
PTCD3-204ENST00000418628 DIXDC1Q155Q3 683 aa22.82■■□□□ 1.24
PTCD3-204ENST00000418628 APOBEC3HQ6NTF7 200 aaKnown RBP22.82■■□□□ 1.24
PTCD3-204ENST00000418628 DAGLAQ9Y4D2 1042 aa22.82■■□□□ 1.24
PTCD3-204ENST00000418628 SIPA1L1O43166 1804 aa22.82■■□□□ 1.24
PTCD3-204ENST00000418628 SALL3Q9BXA9 1300 aa22.82■■□□□ 1.24
PTCD3-204ENST00000418628 SSC5DA1L4H1 1573 aa22.81■■□□□ 1.24
PTCD3-204ENST00000418628 ZAP70P43403 619 aa22.81■■□□□ 1.24
PTCD3-204ENST00000418628 SPTY2D1Q68D10 685 aaPredicted RBP22.81■■□□□ 1.24
PTCD3-204ENST00000418628 USP48Q86UV5 1035 aa22.81■■□□□ 1.24
PTCD3-204ENST00000418628 APOBEC3FQ8IUX4 373 aaKnown RBP22.81■■□□□ 1.24
PTCD3-204ENST00000418628 SNRKQ9NRH2 765 aa22.81■■□□□ 1.24
PTCD3-204ENST00000418628 IGHDP01880 384 aa22.8■■□□□ 1.24
PTCD3-204ENST00000418628 TBC1D9Q6ZT07 1266 aa22.8■■□□□ 1.24
PTCD3-204ENST00000418628 SULF1Q8IWU6 871 aa22.8■■□□□ 1.24
PTCD3-204ENST00000418628 NSUN4Q96CB9 384 aaKnown RBP22.8■■□□□ 1.24
PTCD3-204ENST00000418628 FAM163AQ96GL9 167 aaPredicted RBP22.8■■□□□ 1.24
PTCD3-204ENST00000418628 CREBZFQ9NS37 354 aa22.8■■□□□ 1.24
PTCD3-204ENST00000418628 ABCF2Q9UG63 623 aa22.8■■□□□ 1.24
PTCD3-204ENST00000418628 NAV1Q8NEY1 1877 aa22.79■■□□□ 1.24
PTCD3-204ENST00000418628 ATP5JP18859 108 aa22.79■■□□□ 1.24
PTCD3-204ENST00000418628 MECOMQ03112 1051 aa22.79■■□□□ 1.24
PTCD3-204ENST00000418628 CST9Q5W186 159 aa22.79■■□□□ 1.24
PTCD3-204ENST00000418628 DLK2Q6UY11 383 aa22.79■■□□□ 1.24
PTCD3-204ENST00000418628 ERICH6Q7L0X2 663 aa22.79■■□□□ 1.24
PTCD3-204ENST00000418628 ZNF70Q9UC06 446 aaPredicted RBP22.79■■□□□ 1.24
PTCD3-204ENST00000418628 MYO1BO43795 1136 aa22.78■■□□□ 1.24
PTCD3-204ENST00000418628 RBM5P52756 815 aaKnown RBP eCLIP22.78■■□□□ 1.24
PTCD3-204ENST00000418628 RWDD1Q9H446 243 aaPredicted RBP22.78■■□□□ 1.24
PTCD3-204ENST00000418628 PIH1D3Q9NQM4 214 aaKnown RBP22.78■■□□□ 1.24
PTCD3-204ENST00000418628 MROH7-TTC4A0A0A0MT08 1334 aa22.78■■□□□ 1.24
PTCD3-204ENST00000418628 RPAP1Q9BWH6 1393 aaPredicted RBP22.77■■□□□ 1.24
PTCD3-204ENST00000418628 CLRN2A0PK11 232 aa22.77■■□□□ 1.24
PTCD3-204ENST00000418628 TMEM88BA6NKF7 163 aa22.77■■□□□ 1.24
PTCD3-204ENST00000418628 DZIP1Q86YF9 867 aaKnown RBP22.77■■□□□ 1.24
PTCD3-204ENST00000418628 CDCA5Q96FF9 252 aa22.77■■□□□ 1.24
PTCD3-204ENST00000418628 TDRD3Q9H7E2 651 aaKnown RBP22.77■■□□□ 1.24
PTCD3-204ENST00000418628 SCAF8Q9UPN6 1271 aaKnown RBP22.77■■□□□ 1.24
PTCD3-204ENST00000418628 PPP2R3BQ9Y5P8 575 aa22.77■■□□□ 1.24
PTCD3-204ENST00000418628 NDUFB9Q9Y6M9 179 aa22.77■■□□□ 1.24
PTCD3-204ENST00000418628 CNTNAP1P78357 1384 aa22.76■■□□□ 1.23
PTCD3-204ENST00000418628 FKBP1CQ5VVH2 108 aa22.76■■□□□ 1.23
PTCD3-204ENST00000418628 ANTXR1Q9H6X2 564 aa22.76■■□□□ 1.23
PTCD3-204ENST00000418628 OTUD7AQ8TE49 926 aaPredicted RBP22.75■■□□□ 1.23
PTCD3-204ENST00000418628 HAUS7Q99871 368 aa22.75■■□□□ 1.23
PTCD3-204ENST00000418628 ECHDC1Q9NTX5 307 aa22.75■■□□□ 1.23
PTCD3-204ENST00000418628 ATAD5Q96QE3 1844 aa22.75■■□□□ 1.23
PTCD3-204ENST00000418628 BAZ2AQ9UIF9 1905 aaKnown RBP22.74■■□□□ 1.23
PTCD3-204ENST00000418628 GPR75-ASB3A0A0A6YYF3 556 aa22.74■■□□□ 1.23
PTCD3-204ENST00000418628 CELF2O95319 508 aaKnown RBP22.74■■□□□ 1.23
PTCD3-204ENST00000418628 HTRA3P83110 453 aa22.74■■□□□ 1.23
PTCD3-204ENST00000418628 SLF2Q8IX21 1173 aa22.74■■□□□ 1.23
PTCD3-204ENST00000418628 DEFB129Q9H1M3 183 aa22.74■■□□□ 1.23
PTCD3-204ENST00000418628 TTC41PQ6P2S7 1318 aa22.74■■□□□ 1.23
PTCD3-204ENST00000418628 CDC42EP5Q6NZY7 148 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms