RNA–Protein interactions for RNA: ENST00000418373.1

PDLIM4-203, Transcript of PDZ and LIM domain 4, humanhuman

TSL 5

Gene PDLIM4, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-203ENST00000418373 BICC1Q9H694 974 aaKnown RBP16.09■□□□□ 0.17
PDLIM4-203ENST00000418373 TESPA1A2RU30 521 aaPredicted RBP16.08■□□□□ 0.16
PDLIM4-203ENST00000418373 GRIK5Q16478 980 aa16.08■□□□□ 0.16
PDLIM4-203ENST00000418373 DZIP1LQ8IYY4 767 aaKnown RBP16.08■□□□□ 0.16
PDLIM4-203ENST00000418373 MRPL50Q8N5N7 158 aaKnown RBP16.08■□□□□ 0.16
PDLIM4-203ENST00000418373 TDRD3Q9H7E2 651 aaKnown RBP16.08■□□□□ 0.16
PDLIM4-203ENST00000418373 CRKP46108 304 aa16.07■□□□□ 0.16
PDLIM4-203ENST00000418373 LRRC24Q50LG9 513 aa16.07■□□□□ 0.16
PDLIM4-203ENST00000418373 PTPN18Q99952 460 aa16.07■□□□□ 0.16
PDLIM4-203ENST00000418373 PTPRCP08575 1304 aa16.06■□□□□ 0.16
PDLIM4-203ENST00000418373 CRHR2Q13324 411 aa16.06■□□□□ 0.16
PDLIM4-203ENST00000418373 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.06■□□□□ 0.16
PDLIM4-203ENST00000418373 OTOP1Q7RTM1 612 aa16.06■□□□□ 0.16
PDLIM4-203ENST00000418373 MS4A4AQ96JQ5 239 aa16.06■□□□□ 0.16
PDLIM4-203ENST00000418373 PDE8BO95263 885 aa16.05■□□□□ 0.16
PDLIM4-203ENST00000418373 ZEB1P37275 1124 aaPredicted RBP16.05■□□□□ 0.16
PDLIM4-203ENST00000418373 HDLBPQ00341 1268 aaKnown RBP16.05■□□□□ 0.16
PDLIM4-203ENST00000418373 PRPF38BQ5VTL8 546 aaKnown RBP16.05■□□□□ 0.16
PDLIM4-203ENST00000418373 TMEM39BQ9GZU3 492 aa16.05■□□□□ 0.16
PDLIM4-203ENST00000418373 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.05■□□□□ 0.16
PDLIM4-203ENST00000418373 IQSEC3Q9UPP2 1182 aaPredicted RBP16.05■□□□□ 0.16
PDLIM4-203ENST00000418373 TRIM17Q9Y577 477 aa16.05■□□□□ 0.16
PDLIM4-203ENST00000418373 KIF16BQ96L93 1317 aa16.04■□□□□ 0.16
PDLIM4-203ENST00000418373 TCP10L2B9ZVM9 353 aa16.04■□□□□ 0.16
PDLIM4-203ENST00000418373 CAP1Q01518 475 aa16.04■□□□□ 0.16
PDLIM4-203ENST00000418373 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.04■□□□□ 0.16
PDLIM4-203ENST00000418373 TBC1D22AQ8WUA7 517 aa16.04■□□□□ 0.16
PDLIM4-203ENST00000418373 OPTNQ96CV9 577 aa16.04■□□□□ 0.16
PDLIM4-203ENST00000418373 USP44Q9H0E7 712 aa16.04■□□□□ 0.16
PDLIM4-203ENST00000418373 ELP3Q9H9T3 547 aa16.04■□□□□ 0.16
PDLIM4-203ENST00000418373 FGFR2P21802 821 aa16.03■□□□□ 0.16
PDLIM4-203ENST00000418373 VGLL4Q14135 290 aa16.03■□□□□ 0.16
PDLIM4-203ENST00000418373 METTL24Q5JXM2 366 aa16.03■□□□□ 0.16
PDLIM4-203ENST00000418373 OTUD7BQ6GQQ9 843 aa16.03■□□□□ 0.16
PDLIM4-203ENST00000418373 VPS37DQ86XT2 251 aa16.03■□□□□ 0.16
PDLIM4-203ENST00000418373 KLHDC4Q8TBB5 520 aa16.03■□□□□ 0.16
PDLIM4-203ENST00000418373 CNKSR2Q8WXI2 1034 aa16.03■□□□□ 0.16
PDLIM4-203ENST00000418373 SSH1Q8WYL5 1049 aa16.03■□□□□ 0.16
PDLIM4-203ENST00000418373 ERO1AQ96HE7 468 aa16.03■□□□□ 0.16
PDLIM4-203ENST00000418373 TNNI2P48788 182 aa16.02■□□□□ 0.16
PDLIM4-203ENST00000418373 BCAMP50895 628 aa16.02■□□□□ 0.16
PDLIM4-203ENST00000418373 CAVIN4Q5BKX8 364 aa16.02■□□□□ 0.16
PDLIM4-203ENST00000418373 BRI3BPQ8WY22 251 aa16.02■□□□□ 0.16
PDLIM4-203ENST00000418373 ZDHHC15Q96MV8 337 aa16.02■□□□□ 0.16
PDLIM4-203ENST00000418373 MRIQ9BWK5 157 aa16.02■□□□□ 0.16
PDLIM4-203ENST00000418373 ZSWIM8A7E2V4 1837 aa16.01■□□□□ 0.15
PDLIM4-203ENST00000418373 RFX5P48382 616 aaPredicted RBP16.01■□□□□ 0.15
PDLIM4-203ENST00000418373 MAP3K9P80192 1104 aa16.01■□□□□ 0.15
PDLIM4-203ENST00000418373 CHAF1AQ13111 956 aaPredicted RBP16.01■□□□□ 0.15
PDLIM4-203ENST00000418373 PUM3Q15397 648 aaKnown RBP16.01■□□□□ 0.15
PDLIM4-203ENST00000418373 CD99L2Q8TCZ2 262 aa16.01■□□□□ 0.15
PDLIM4-203ENST00000418373 TEKT1Q969V4 418 aa16.01■□□□□ 0.15
PDLIM4-203ENST00000418373 PTPN22Q9Y2R2 807 aa16.01■□□□□ 0.15
PDLIM4-203ENST00000418373 SUGT1Q9Y2Z0 365 aa16.01■□□□□ 0.15
PDLIM4-203ENST00000418373 RPAP1Q9BWH6 1393 aaPredicted RBP16■□□□□ 0.15
PDLIM4-203ENST00000418373 E9PSI1 815 aa16■□□□□ 0.15
PDLIM4-203ENST00000418373 CACNB3P54284 484 aa16■□□□□ 0.15
PDLIM4-203ENST00000418373 SP3Q02447 781 aa16■□□□□ 0.15
PDLIM4-203ENST00000418373 FKBP1CQ5VVH2 108 aa16■□□□□ 0.15
PDLIM4-203ENST00000418373 INTS3Q68E01 1043 aaKnown RBP16■□□□□ 0.15
PDLIM4-203ENST00000418373 APOBEC3HQ6NTF7 200 aaKnown RBP16■□□□□ 0.15
PDLIM4-203ENST00000418373 FAM83AQ86UY5 434 aa16■□□□□ 0.15
PDLIM4-203ENST00000418373 ARMC5Q96C12 935 aa16■□□□□ 0.15
PDLIM4-203ENST00000418373 POTEFA5A3E0 1075 aa15.99■□□□□ 0.15
PDLIM4-203ENST00000418373 SPDYE5A6NIY4 337 aa15.99■□□□□ 0.15
PDLIM4-203ENST00000418373 GTF2A2P52657 109 aa15.99■□□□□ 0.15
PDLIM4-203ENST00000418373 SLFN5Q08AF3 891 aa15.99■□□□□ 0.15
PDLIM4-203ENST00000418373 HHIPL2Q6UWX4 724 aa15.99■□□□□ 0.15
PDLIM4-203ENST00000418373 CSADQ9Y600 493 aa15.99■□□□□ 0.15
PDLIM4-203ENST00000418373 SNCAIPQ9Y6H5 919 aa15.99■□□□□ 0.15
PDLIM4-203ENST00000418373 MAST3O60307 1309 aa15.98■□□□□ 0.15
PDLIM4-203ENST00000418373 AK9Q5TCS8 1911 aa15.98■□□□□ 0.15
PDLIM4-203ENST00000418373 CCL15-CCL14A0A0B4J2E2 113 aa15.98■□□□□ 0.15
PDLIM4-203ENST00000418373 EYA2O00167 538 aa15.98■□□□□ 0.15
PDLIM4-203ENST00000418373 FRAT2O75474 233 aaPredicted RBP15.98■□□□□ 0.15
PDLIM4-203ENST00000418373 IFIT1P09914 478 aaKnown RBP15.98■□□□□ 0.15
PDLIM4-203ENST00000418373 CCL15Q16663 113 aa15.98■□□□□ 0.15
PDLIM4-203ENST00000418373 ATG9AQ7Z3C6 839 aa15.98■□□□□ 0.15
PDLIM4-203ENST00000418373 FAM43AQ8N2R8 423 aa15.98■□□□□ 0.15
PDLIM4-203ENST00000418373 OTUD5Q96G74 571 aa15.98■□□□□ 0.15
PDLIM4-203ENST00000418373 EFCC1Q9HA90 598 aa15.98■□□□□ 0.15
PDLIM4-203ENST00000418373 ALDH1L2Q3SY69 923 aa15.97■□□□□ 0.15
PDLIM4-203ENST00000418373 CEP290O15078 2479 aa15.97■□□□□ 0.15
PDLIM4-203ENST00000418373 MYH2Q9UKX2 1941 aa15.96■□□□□ 0.15
PDLIM4-203ENST00000418373 TAF1CQ15572 869 aaPredicted RBP15.96■□□□□ 0.15
PDLIM4-203ENST00000418373 ERO1BQ86YB8 467 aa15.96■□□□□ 0.15
PDLIM4-203ENST00000418373 LPIN2Q92539 896 aa15.96■□□□□ 0.15
PDLIM4-203ENST00000418373 WRNIP1Q96S55 665 aa15.96■□□□□ 0.15
PDLIM4-203ENST00000418373 ZCCHC17Q9NP64 241 aaKnown RBP15.96■□□□□ 0.15
PDLIM4-203ENST00000418373 TMOD2Q9NZR1 351 aa15.96■□□□□ 0.15
PDLIM4-203ENST00000418373 PCDH10Q9P2E7 1040 aa15.96■□□□□ 0.15
PDLIM4-203ENST00000418373 DOCK2Q92608 1830 aa15.96■□□□□ 0.14
PDLIM4-203ENST00000418373 IRF6O14896 467 aa15.95■□□□□ 0.14
PDLIM4-203ENST00000418373 SLC5A1P13866 664 aa15.95■□□□□ 0.14
PDLIM4-203ENST00000418373 TRMT2AQ8IZ69 625 aaKnown RBP15.95■□□□□ 0.14
PDLIM4-203ENST00000418373 WDR66Q8TBY9 1149 aa15.95■□□□□ 0.14
PDLIM4-203ENST00000418373 ZKSCAN4Q969J2 545 aaPredicted RBP15.95■□□□□ 0.14
PDLIM4-203ENST00000418373 HOOK2Q96ED9 719 aa15.95■□□□□ 0.14
PDLIM4-203ENST00000418373 ZFYVE28Q9HCC9 887 aa15.95■□□□□ 0.14
PDLIM4-203ENST00000418373 CIAO1O76071 339 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms