RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 RSBN1LQ6PCB5 846 aaPredicted RBP10.25□□□□□ -0.77
TRIM48-201ENST00000417545 SKAP1Q86WV1 359 aa10.25□□□□□ -0.77
TRIM48-201ENST00000417545 SLF2Q8IX21 1173 aa10.25□□□□□ -0.77
TRIM48-201ENST00000417545 PI4K2BQ8TCG2 481 aa10.25□□□□□ -0.77
TRIM48-201ENST00000417545 EVI5LQ96CN4 794 aa10.25□□□□□ -0.77
TRIM48-201ENST00000417545 COL1A1P02452 1464 aaPredicted RBP10.25□□□□□ -0.77
TRIM48-201ENST00000417545 MYO5AQ9Y4I1 1855 aaKnown RBP10.25□□□□□ -0.77
TRIM48-201ENST00000417545 DOCK2Q92608 1830 aa10.25□□□□□ -0.77
TRIM48-201ENST00000417545 FZD9O00144 591 aa10.24□□□□□ -0.77
TRIM48-201ENST00000417545 RPS12P25398 132 aaKnown RBP10.24□□□□□ -0.77
TRIM48-201ENST00000417545 PRELPP51888 382 aa10.24□□□□□ -0.77
TRIM48-201ENST00000417545 FKBP1AP62942 108 aaKnown RBP10.24□□□□□ -0.77
TRIM48-201ENST00000417545 CASC1Q6TDU7 716 aa10.24□□□□□ -0.77
TRIM48-201ENST00000417545 TBC1D9Q6ZT07 1266 aa10.24□□□□□ -0.77
TRIM48-201ENST00000417545 KIAA0825Q8IV33 1275 aa10.24□□□□□ -0.77
TRIM48-201ENST00000417545 GPC2Q8N158 579 aa10.24□□□□□ -0.77
TRIM48-201ENST00000417545 OSBPL3Q9H4L5 887 aa10.24□□□□□ -0.77
TRIM48-201ENST00000417545 KCNQ5Q9NR82 932 aa10.24□□□□□ -0.77
TRIM48-201ENST00000417545 TTF2Q9UNY4 1162 aaKnown RBP10.24□□□□□ -0.77
TRIM48-201ENST00000417545 SALL1Q9NSC2 1324 aa10.24□□□□□ -0.77
TRIM48-201ENST00000417545 H7C1D1 291 aa10.24□□□□□ -0.77
TRIM48-201ENST00000417545 CYP2E1P05181 493 aaPredicted RBP10.24□□□□□ -0.77
TRIM48-201ENST00000417545 LDHCP07864 332 aa10.24□□□□□ -0.77
TRIM48-201ENST00000417545 GMPSP49915 693 aaPredicted RBP10.24□□□□□ -0.77
TRIM48-201ENST00000417545 DACT2Q5SW24 774 aa10.24□□□□□ -0.77
TRIM48-201ENST00000417545 NAA16Q6N069 864 aaPredicted RBP10.24□□□□□ -0.77
TRIM48-201ENST00000417545 AGBL3Q8NEM8 1001 aa10.24□□□□□ -0.77
TRIM48-201ENST00000417545 EDC3Q96F86 508 aaKnown RBP10.24□□□□□ -0.77
TRIM48-201ENST00000417545 MXD3Q9BW11 206 aa10.24□□□□□ -0.77
TRIM48-201ENST00000417545 DIAPH3Q9NSV4 1193 aa10.24□□□□□ -0.77
TRIM48-201ENST00000417545 SUGT1Q9Y2Z0 365 aa10.24□□□□□ -0.77
TRIM48-201ENST00000417545 MYH2Q9UKX2 1941 aa10.23□□□□□ -0.77
TRIM48-201ENST00000417545 HIP1O00291 1037 aa10.23□□□□□ -0.77
TRIM48-201ENST00000417545 DDNO94850 711 aaPredicted RBP10.23□□□□□ -0.77
TRIM48-201ENST00000417545 VIL1P09327 827 aaKnown RBP10.23□□□□□ -0.77
TRIM48-201ENST00000417545 PRDX5P30044 214 aa10.23□□□□□ -0.77
TRIM48-201ENST00000417545 KBTBD3Q8NAB2 608 aa10.23□□□□□ -0.77
TRIM48-201ENST00000417545 TEKT1Q969V4 418 aa10.23□□□□□ -0.77
TRIM48-201ENST00000417545 ANTXR1Q9H6X2 564 aa10.23□□□□□ -0.77
TRIM48-201ENST00000417545 PIH1D3Q9NQM4 214 aaKnown RBP10.23□□□□□ -0.77
TRIM48-201ENST00000417545 ZNF646O15015 1829 aaPredicted RBP10.23□□□□□ -0.77
TRIM48-201ENST00000417545 ZFYP08048 801 aaPredicted RBP10.22□□□□□ -0.77
TRIM48-201ENST00000417545 USP17L8P0C7I0 530 aa10.22□□□□□ -0.77
TRIM48-201ENST00000417545 CYP7A1P22680 504 aa10.22□□□□□ -0.77
TRIM48-201ENST00000417545 SCNN1DP51172 638 aa10.22□□□□□ -0.77
TRIM48-201ENST00000417545 BMP2KLQ5H9B9 411 aa10.22□□□□□ -0.77
TRIM48-201ENST00000417545 SLC9C2Q5TAH2 1124 aa10.22□□□□□ -0.77
TRIM48-201ENST00000417545 MAGEB6Q8N7X4 407 aa10.22□□□□□ -0.77
TRIM48-201ENST00000417545 ZNF526Q8TF50 670 aaPredicted RBP10.22□□□□□ -0.77
TRIM48-201ENST00000417545 IQCA1LA6NCM1 817 aa10.21□□□□□ -0.78
TRIM48-201ENST00000417545 GLTPD2A6NH11 291 aa10.21□□□□□ -0.78
TRIM48-201ENST00000417545 MYO1BO43795 1136 aa10.21□□□□□ -0.78
TRIM48-201ENST00000417545 IGSF3O75054 1194 aa10.21□□□□□ -0.78
TRIM48-201ENST00000417545 BAG3O95817 575 aa10.21□□□□□ -0.78
TRIM48-201ENST00000417545 GSPT1P15170 499 aaKnown RBP10.21□□□□□ -0.78
TRIM48-201ENST00000417545 SDSP20132 328 aa10.21□□□□□ -0.78
TRIM48-201ENST00000417545 MECOMQ03112 1051 aa10.21□□□□□ -0.78
TRIM48-201ENST00000417545 DLGAP5Q15398 846 aa10.21□□□□□ -0.78
TRIM48-201ENST00000417545 RBM26Q5T8P6 1007 aaKnown RBP10.21□□□□□ -0.78
TRIM48-201ENST00000417545 MICALL2Q8IY33 904 aa10.21□□□□□ -0.78
TRIM48-201ENST00000417545 CERS5Q8N5B7 392 aa10.21□□□□□ -0.78
TRIM48-201ENST00000417545 RUFY2Q8WXA3 655 aa10.21□□□□□ -0.78
TRIM48-201ENST00000417545 DPF2Q92785 391 aa10.21□□□□□ -0.78
TRIM48-201ENST00000417545 TMOD2Q9NZR1 351 aa10.21□□□□□ -0.78
TRIM48-201ENST00000417545 CNOT7Q9UIV1 285 aaKnown RBP10.21□□□□□ -0.78
TRIM48-201ENST00000417545 RFX7Q2KHR2 1363 aa10.2□□□□□ -0.78
TRIM48-201ENST00000417545 ZNF532Q9HCE3 1301 aa10.2□□□□□ -0.78
TRIM48-201ENST00000417545 RNF113AO15541 343 aaKnown RBP10.2□□□□□ -0.78
TRIM48-201ENST00000417545 CDC45O75419 566 aa10.2□□□□□ -0.78
TRIM48-201ENST00000417545 PDE6AP16499 860 aa10.2□□□□□ -0.78
TRIM48-201ENST00000417545 CRKP46108 304 aa10.2□□□□□ -0.78
TRIM48-201ENST00000417545 MMP14P50281 582 aa10.2□□□□□ -0.78
TRIM48-201ENST00000417545 TMED8Q6PL24 325 aaPredicted RBP10.2□□□□□ -0.78
TRIM48-201ENST00000417545 AIDAQ96BJ3 306 aa10.2□□□□□ -0.78
TRIM48-201ENST00000417545 HACL1Q9UJ83 578 aa10.2□□□□□ -0.78
TRIM48-201ENST00000417545 SCN4AP35499 1836 aa10.2□□□□□ -0.78
TRIM48-201ENST00000417545 MROH7-TTC4A0A0A0MT08 1334 aa10.19□□□□□ -0.78
TRIM48-201ENST00000417545 ADAMTSL1Q8N6G6 1762 aa10.19□□□□□ -0.78
TRIM48-201ENST00000417545 GOLGB1Q14789 3259 aaKnown RBP10.19□□□□□ -0.78
TRIM48-201ENST00000417545 MFAP1P55081 439 aaKnown RBP10.19□□□□□ -0.78
TRIM48-201ENST00000417545 DIXDC1Q155Q3 683 aa10.19□□□□□ -0.78
TRIM48-201ENST00000417545 KIF4BQ2VIQ3 1234 aa10.19□□□□□ -0.78
TRIM48-201ENST00000417545 CFAP100Q494V2 611 aa10.19□□□□□ -0.78
TRIM48-201ENST00000417545 CERS3Q8IU89 383 aa10.19□□□□□ -0.78
TRIM48-201ENST00000417545 NSUN4Q96CB9 384 aaKnown RBP10.19□□□□□ -0.78
TRIM48-201ENST00000417545 DDRGK1Q96HY6 314 aa10.19□□□□□ -0.78
TRIM48-201ENST00000417545 MYOZ2Q9NPC6 264 aa10.19□□□□□ -0.78
TRIM48-201ENST00000417545 GPRC5DQ9NZD1 345 aa10.19□□□□□ -0.78
TRIM48-201ENST00000417545 SERPINA10Q9UK55 444 aa10.19□□□□□ -0.78
TRIM48-201ENST00000417545 ECM29Q5VYK3 1845 aa10.19□□□□□ -0.78
TRIM48-201ENST00000417545 WDR90Q96KV7 1748 aa10.18□□□□□ -0.78
TRIM48-201ENST00000417545 SRCAPQ6ZRS2 3230 aa10.18□□□□□ -0.78
TRIM48-201ENST00000417545 MAGEB6P1A0A0J9YX57 407 aa10.18□□□□□ -0.78
TRIM48-201ENST00000417545 PLCG2P16885 1265 aa10.18□□□□□ -0.78
TRIM48-201ENST00000417545 ADD2P35612 726 aa10.18□□□□□ -0.78
TRIM48-201ENST00000417545 BTDP43251 543 aa10.18□□□□□ -0.78
TRIM48-201ENST00000417545 HDLBPQ00341 1268 aaKnown RBP10.18□□□□□ -0.78
TRIM48-201ENST00000417545 UBE3CQ15386 1083 aa10.18□□□□□ -0.78
TRIM48-201ENST00000417545 TBC1D10BQ4KMP7 808 aaPredicted RBP10.18□□□□□ -0.78
TRIM48-201ENST00000417545 EAPPQ56P03 285 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms