RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 ZFYVE28Q9HCC9 887 aa22.78■■□□□ 1.24
VCP-202ENST00000417448 CUL9Q8IWT3 2517 aa22.78■■□□□ 1.24
VCP-202ENST00000417448 NEURL1BA8MQ27 555 aa22.77■■□□□ 1.24
VCP-202ENST00000417448 H7C1W4 665 aa22.77■■□□□ 1.24
VCP-202ENST00000417448 KCNJ4P48050 445 aa22.77■■□□□ 1.24
VCP-202ENST00000417448 MPHOSPH8Q99549 860 aa22.77■■□□□ 1.24
VCP-202ENST00000417448 TAF5LO75529 589 aa22.76■■□□□ 1.23
VCP-202ENST00000417448 ARHGEF6Q15052 776 aa22.76■■□□□ 1.23
VCP-202ENST00000417448 TEPSINQ96N21 525 aa22.76■■□□□ 1.23
VCP-202ENST00000417448 IL1R1P14778 569 aa22.75■■□□□ 1.23
VCP-202ENST00000417448 VGLL4Q14135 290 aa22.75■■□□□ 1.23
VCP-202ENST00000417448 C15orf52Q6ZUT6 534 aaKnown RBP22.75■■□□□ 1.23
VCP-202ENST00000417448 PLA2G12BQ9BX93 195 aa22.75■■□□□ 1.23
VCP-202ENST00000417448 PRO3102Q9H379 93 aa22.75■■□□□ 1.23
VCP-202ENST00000417448 FKBP1AP62942 108 aaKnown RBP22.74■■□□□ 1.23
VCP-202ENST00000417448 MTFR1Q15390 333 aa22.74■■□□□ 1.23
VCP-202ENST00000417448 HELBQ8NG08 1087 aaPredicted RBP22.74■■□□□ 1.23
VCP-202ENST00000417448 CSF1RP07333 972 aa22.73■■□□□ 1.23
VCP-202ENST00000417448 GTF2A2P52657 109 aa22.73■■□□□ 1.23
VCP-202ENST00000417448 RBM5P52756 815 aaKnown RBP eCLIP22.73■■□□□ 1.23
VCP-202ENST00000417448 CASP7P55210 303 aa22.73■■□□□ 1.23
VCP-202ENST00000417448 LACTBP83111 547 aaPredicted RBP22.73■■□□□ 1.23
VCP-202ENST00000417448 NEXNQ0ZGT2 675 aa22.73■■□□□ 1.23
VCP-202ENST00000417448 SPDYE2Q495Y8 402 aa22.73■■□□□ 1.23
VCP-202ENST00000417448 SLC17A8Q8NDX2 589 aa22.73■■□□□ 1.23
VCP-202ENST00000417448 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.72■■□□□ 1.23
VCP-202ENST00000417448 DPF3Q92784 378 aa22.72■■□□□ 1.23
VCP-202ENST00000417448 ZNF70Q9UC06 446 aaPredicted RBP22.72■■□□□ 1.23
VCP-202ENST00000417448 TLR2O60603 784 aa22.71■■□□□ 1.23
VCP-202ENST00000417448 YTHDC1Q96MU7 727 aaKnown RBP22.71■■□□□ 1.23
VCP-202ENST00000417448 TDRD3Q9H7E2 651 aaKnown RBP22.71■■□□□ 1.23
VCP-202ENST00000417448 CTGFP29279 349 aa22.7■■□□□ 1.22
VCP-202ENST00000417448 FLIIQ13045 1269 aa22.7■■□□□ 1.22
VCP-202ENST00000417448 TNFAIP1Q13829 316 aa22.7■■□□□ 1.22
VCP-202ENST00000417448 GCKRQ14397 625 aa22.7■■□□□ 1.22
VCP-202ENST00000417448 ZNF804AQ7Z570 1209 aa22.7■■□□□ 1.22
VCP-202ENST00000417448 UBE2Q1Q7Z7E8 422 aa22.7■■□□□ 1.22
VCP-202ENST00000417448 SSH1Q8WYL5 1049 aa22.7■■□□□ 1.22
VCP-202ENST00000417448 CHMP4AQ9BY43 222 aa22.7■■□□□ 1.22
VCP-202ENST00000417448 TMEM39BQ9GZU3 492 aa22.7■■□□□ 1.22
VCP-202ENST00000417448 ZBED9Q6R2W3 1325 aa22.7■■□□□ 1.22
VCP-202ENST00000417448 ECM2O94769 699 aaPredicted RBP22.69■■□□□ 1.22
VCP-202ENST00000417448 MAP3K9P80192 1104 aa22.69■■□□□ 1.22
VCP-202ENST00000417448 MRPL50Q8N5N7 158 aaKnown RBP22.69■■□□□ 1.22
VCP-202ENST00000417448 F6X3S4 739 aa22.68■■□□□ 1.22
VCP-202ENST00000417448 FKBP5Q13451 457 aaPredicted RBP22.68■■□□□ 1.22
VCP-202ENST00000417448 SPDYE5A6NIY4 337 aa22.67■■□□□ 1.22
VCP-202ENST00000417448 TCP10L2B9ZVM9 353 aa22.67■■□□□ 1.22
VCP-202ENST00000417448 BTBD19C9JJ37 291 aa22.67■■□□□ 1.22
VCP-202ENST00000417448 KIF22Q14807 665 aa22.67■■□□□ 1.22
VCP-202ENST00000417448 SNCAIPQ9Y6H5 919 aa22.67■■□□□ 1.22
VCP-202ENST00000417448 ANKRD18BA2A2Z9 1011 aa22.66■■□□□ 1.22
VCP-202ENST00000417448 GNRH1P01148 92 aa22.66■■□□□ 1.22
VCP-202ENST00000417448 SERPINA10Q9UK55 444 aa22.66■■□□□ 1.22
VCP-202ENST00000417448 TTF2Q9UNY4 1162 aaKnown RBP22.66■■□□□ 1.22
VCP-202ENST00000417448 CSADQ9Y600 493 aa22.66■■□□□ 1.22
VCP-202ENST00000417448 FAM205AQ6ZU69 1335 aa22.65■■□□□ 1.22
VCP-202ENST00000417448 SOX1O00570 391 aaPredicted RBP22.65■■□□□ 1.22
VCP-202ENST00000417448 MFSD14BQ5SR56 506 aa22.65■■□□□ 1.22
VCP-202ENST00000417448 DZIP1LQ8IYY4 767 aaKnown RBP22.65■■□□□ 1.22
VCP-202ENST00000417448 IRF6O14896 467 aa22.64■■□□□ 1.21
VCP-202ENST00000417448 CETPP11597 493 aa22.64■■□□□ 1.21
VCP-202ENST00000417448 GJA8P48165 433 aa22.64■■□□□ 1.21
VCP-202ENST00000417448 PRMT2P55345 433 aa22.64■■□□□ 1.21
VCP-202ENST00000417448 TRIM47Q96LD4 638 aa22.64■■□□□ 1.21
VCP-202ENST00000417448 ZCCHC17Q9NP64 241 aaKnown RBP22.64■■□□□ 1.21
VCP-202ENST00000417448 MGAMO43451 1857 aa22.63■■□□□ 1.21
VCP-202ENST00000417448 C17orf99Q6UX52 265 aa22.63■■□□□ 1.21
VCP-202ENST00000417448 SMC4Q9NTJ3 1288 aa22.63■■□□□ 1.21
VCP-202ENST00000417448 SRRDQ9UH36 339 aa22.63■■□□□ 1.21
VCP-202ENST00000417448 CCL5P13501 91 aa22.62■■□□□ 1.21
VCP-202ENST00000417448 FOXO4P98177 505 aa22.62■■□□□ 1.21
VCP-202ENST00000417448 GRIK5Q16478 980 aa22.62■■□□□ 1.21
VCP-202ENST00000417448 ERO1BQ86YB8 467 aa22.62■■□□□ 1.21
VCP-202ENST00000417448 CPA4Q9UI42 421 aa22.62■■□□□ 1.21
VCP-202ENST00000417448 ALPK3Q96L96 1907 aa22.62■■□□□ 1.21
VCP-202ENST00000417448 ADGRA2Q96PE1 1338 aa22.61■■□□□ 1.21
VCP-202ENST00000417448 UNC80Q8N2C7 3258 aa22.61■■□□□ 1.21
VCP-202ENST00000417448 ZBTB7BO15156 539 aaPredicted RBP22.61■■□□□ 1.21
VCP-202ENST00000417448 WDHD1O75717 1129 aaPredicted RBP22.61■■□□□ 1.21
VCP-202ENST00000417448 GJB1P08034 283 aa22.61■■□□□ 1.21
VCP-202ENST00000417448 OSBPP22059 807 aa22.61■■□□□ 1.21
VCP-202ENST00000417448 GRK4P32298 578 aa22.61■■□□□ 1.21
VCP-202ENST00000417448 PSMC4P43686 418 aa22.61■■□□□ 1.21
VCP-202ENST00000417448 CRKP46108 304 aa22.61■■□□□ 1.21
VCP-202ENST00000417448 TDRD7Q8NHU6 1098 aaKnown RBP22.61■■□□□ 1.21
VCP-202ENST00000417448 NKX2-3Q8TAU0 364 aa22.61■■□□□ 1.21
VCP-202ENST00000417448 DNAAF4Q8WXU2 420 aa22.61■■□□□ 1.21
VCP-202ENST00000417448 ZKSCAN4Q969J2 545 aaPredicted RBP22.61■■□□□ 1.21
VCP-202ENST00000417448 LRCH3Q96II8 777 aa22.61■■□□□ 1.21
VCP-202ENST00000417448 HTATIP2Q9BUP3 242 aa22.61■■□□□ 1.21
VCP-202ENST00000417448 RIPOR2Q9Y4F9 1068 aa22.61■■□□□ 1.21
VCP-202ENST00000417448 TNNI2P48788 182 aa22.6■■□□□ 1.21
VCP-202ENST00000417448 RARSP54136 660 aaKnown RBP22.6■■□□□ 1.21
VCP-202ENST00000417448 CACNB3P54284 484 aa22.6■■□□□ 1.21
VCP-202ENST00000417448 IFIT5Q13325 482 aaKnown RBP22.6■■□□□ 1.21
VCP-202ENST00000417448 SNAPC2Q13487 334 aa22.6■■□□□ 1.21
VCP-202ENST00000417448 ZNF594Q96JF6 807 aaPredicted RBP22.6■■□□□ 1.21
VCP-202ENST00000417448 WRNIP1Q96S55 665 aa22.6■■□□□ 1.21
VCP-202ENST00000417448 PLIN1O60240 522 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms