RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 MCTP1Q6DN14 999 aa12.65□□□□□ -0.38
SMPD4P1-201ENST00000416717 SLC4A4Q9Y6R1 1079 aa12.65□□□□□ -0.38
SMPD4P1-201ENST00000416717 BAZ2AQ9UIF9 1905 aaKnown RBP12.65□□□□□ -0.38
SMPD4P1-201ENST00000416717 HMGB1P09429 215 aaKnown RBP12.65□□□□□ -0.38
SMPD4P1-201ENST00000416717 HMGB2P26583 209 aaKnown RBP12.65□□□□□ -0.38
SMPD4P1-201ENST00000416717 APOBRQ0VD83 1088 aa12.65□□□□□ -0.38
SMPD4P1-201ENST00000416717 FBXO41Q8TF61 875 aa12.65□□□□□ -0.38
SMPD4P1-201ENST00000416717 EPB41L4AQ9HCS5 686 aaPredicted RBP12.65□□□□□ -0.38
SMPD4P1-201ENST00000416717 INCENPQ9NQS7 918 aa12.65□□□□□ -0.38
SMPD4P1-201ENST00000416717 GPHNQ9NQX3 736 aaPredicted RBP12.65□□□□□ -0.38
SMPD4P1-201ENST00000416717 PARP3Q9Y6F1 533 aa12.65□□□□□ -0.38
SMPD4P1-201ENST00000416717 CCDC88AQ3V6T2 1871 aa12.65□□□□□ -0.38
SMPD4P1-201ENST00000416717 DDX11L8A8MPP1 907 aa12.64□□□□□ -0.39
SMPD4P1-201ENST00000416717 IFNL3Q8IZI9 196 aa12.64□□□□□ -0.39
SMPD4P1-201ENST00000416717 FLAD1Q8NFF5 587 aa12.64□□□□□ -0.39
SMPD4P1-201ENST00000416717 NBPF3Q9H094 633 aa12.64□□□□□ -0.39
SMPD4P1-201ENST00000416717 NAPBQ9H115 298 aa12.64□□□□□ -0.39
SMPD4P1-201ENST00000416717 LEMD3Q9Y2U8 911 aa12.64□□□□□ -0.39
SMPD4P1-201ENST00000416717 PATL2C9JE40 543 aaKnown RBP12.64□□□□□ -0.39
SMPD4P1-201ENST00000416717 PRDX5P30044 214 aa12.64□□□□□ -0.39
SMPD4P1-201ENST00000416717 DYNLL1P63167 89 aaKnown RBP12.64□□□□□ -0.39
SMPD4P1-201ENST00000416717 CTDSPL2Q05D32 466 aa12.64□□□□□ -0.39
SMPD4P1-201ENST00000416717 NAA16Q6N069 864 aaPredicted RBP12.64□□□□□ -0.39
SMPD4P1-201ENST00000416717 OLFM4Q6UX06 510 aa12.64□□□□□ -0.39
SMPD4P1-201ENST00000416717 TBC1D10CQ8IV04 446 aa12.64□□□□□ -0.39
SMPD4P1-201ENST00000416717 NKX2-3Q8TAU0 364 aa12.64□□□□□ -0.39
SMPD4P1-201ENST00000416717 ZNF384Q8TF68 577 aa12.64□□□□□ -0.39
SMPD4P1-201ENST00000416717 SDR42E1Q8WUS8 393 aa12.64□□□□□ -0.39
SMPD4P1-201ENST00000416717 GZF1Q9H116 711 aaPredicted RBP12.64□□□□□ -0.39
SMPD4P1-201ENST00000416717 ALDH8A1Q9H2A2 487 aaPredicted RBP12.64□□□□□ -0.39
SMPD4P1-201ENST00000416717 IRS2Q9Y4H2 1338 aa12.64□□□□□ -0.39
SMPD4P1-201ENST00000416717 GSG1L2A8MUP6 293 aa12.63□□□□□ -0.39
SMPD4P1-201ENST00000416717 TRAK2O60296 914 aa12.63□□□□□ -0.39
SMPD4P1-201ENST00000416717 BRD1O95696 1058 aa12.63□□□□□ -0.39
SMPD4P1-201ENST00000416717 TDO2P48775 406 aa12.63□□□□□ -0.39
SMPD4P1-201ENST00000416717 EXOSC10Q01780 885 aaKnown RBP12.63□□□□□ -0.39
SMPD4P1-201ENST00000416717 RALYLQ86SE5 291 aaKnown RBP12.63□□□□□ -0.39
SMPD4P1-201ENST00000416717 MAGEB6P1A0A0J9YX57 407 aa12.63□□□□□ -0.39
SMPD4P1-201ENST00000416717 PPFIA3O75145 1194 aa12.63□□□□□ -0.39
SMPD4P1-201ENST00000416717 BBOX1O75936 387 aa12.63□□□□□ -0.39
SMPD4P1-201ENST00000416717 SYT1P21579 422 aa12.63□□□□□ -0.39
SMPD4P1-201ENST00000416717 CCT2P78371 535 aaKnown RBP12.63□□□□□ -0.39
SMPD4P1-201ENST00000416717 MECOMQ03112 1051 aa12.63□□□□□ -0.39
SMPD4P1-201ENST00000416717 DEFB132Q7Z7B7 95 aa12.63□□□□□ -0.39
SMPD4P1-201ENST00000416717 CAMKK2Q96RR4 588 aa12.63□□□□□ -0.39
SMPD4P1-201ENST00000416717 BRIP1Q9BX63 1249 aa12.63□□□□□ -0.39
SMPD4P1-201ENST00000416717 GGA1Q9UJY5 639 aa12.63□□□□□ -0.39
SMPD4P1-201ENST00000416717 C6orf229H3BNL8 230 aa12.62□□□□□ -0.39
SMPD4P1-201ENST00000416717 PPEF1O14829 653 aaPredicted RBP12.62□□□□□ -0.39
SMPD4P1-201ENST00000416717 SEMA3EO15041 775 aa12.62□□□□□ -0.39
SMPD4P1-201ENST00000416717 PRC1O43663 620 aa12.62□□□□□ -0.39
SMPD4P1-201ENST00000416717 HOXA10P31260 410 aaPredicted RBP12.62□□□□□ -0.39
SMPD4P1-201ENST00000416717 SLC15A2Q16348 729 aa12.62□□□□□ -0.39
SMPD4P1-201ENST00000416717 RAB11FIP4Q86YS3 637 aa12.62□□□□□ -0.39
SMPD4P1-201ENST00000416717 NCOA7Q8NI08 942 aa12.62□□□□□ -0.39
SMPD4P1-201ENST00000416717 COL11A2P13942 1736 aaPredicted RBP12.62□□□□□ -0.39
SMPD4P1-201ENST00000416717 NRXN2Q9P2S2 1712 aa12.62□□□□□ -0.39
SMPD4P1-201ENST00000416717 B4E1Z4 1266 aa12.62□□□□□ -0.39
SMPD4P1-201ENST00000416717 SRGNP10124 158 aa12.62□□□□□ -0.39
SMPD4P1-201ENST00000416717 TRDNQ13061 729 aa12.62□□□□□ -0.39
SMPD4P1-201ENST00000416717 ZNF804AQ7Z570 1209 aa12.62□□□□□ -0.39
SMPD4P1-201ENST00000416717 NSUN4Q96CB9 384 aaKnown RBP12.62□□□□□ -0.39
SMPD4P1-201ENST00000416717 CRAMP1Q96RY5 1269 aa12.62□□□□□ -0.39
SMPD4P1-201ENST00000416717 PDGFDQ9GZP0 370 aaPredicted RBP12.62□□□□□ -0.39
SMPD4P1-201ENST00000416717 POLLQ9UGP5 575 aa12.62□□□□□ -0.39
SMPD4P1-201ENST00000416717 RGPD3A6NKT7 1758 aaPredicted RBP12.61□□□□□ -0.39
SMPD4P1-201ENST00000416717 RGPD4Q7Z3J3 1758 aa12.61□□□□□ -0.39
SMPD4P1-201ENST00000416717 KLRG2A4D1S0 409 aaPredicted RBP12.61□□□□□ -0.39
SMPD4P1-201ENST00000416717 GOLGA6L22H0YM25 854 aa12.61□□□□□ -0.39
SMPD4P1-201ENST00000416717 RIMBP2O15034 1052 aa12.61□□□□□ -0.39
SMPD4P1-201ENST00000416717 STX6O43752 255 aa12.61□□□□□ -0.39
SMPD4P1-201ENST00000416717 JAK2O60674 1132 aa12.61□□□□□ -0.39
SMPD4P1-201ENST00000416717 MCM5P33992 734 aa12.61□□□□□ -0.39
SMPD4P1-201ENST00000416717 ANTXR2P58335 489 aa12.61□□□□□ -0.39
SMPD4P1-201ENST00000416717 SCRN1Q12765 414 aa12.61□□□□□ -0.39
SMPD4P1-201ENST00000416717 MB21D2Q8IYB1 491 aaPredicted RBP12.61□□□□□ -0.39
SMPD4P1-201ENST00000416717 GTF3C6Q969F1 213 aa12.61□□□□□ -0.39
SMPD4P1-201ENST00000416717 ZNF622Q969S3 477 aaKnown RBP eCLIP12.61□□□□□ -0.39
SMPD4P1-201ENST00000416717 NACAP1Q9BZK3 213 aa12.61□□□□□ -0.39
SMPD4P1-201ENST00000416717 NCOA5Q9HCD5 579 aaKnown RBP12.61□□□□□ -0.39
SMPD4P1-201ENST00000416717 TOMM22Q9NS69 142 aa12.61□□□□□ -0.39
SMPD4P1-201ENST00000416717 STK32BQ9NY57 414 aa12.61□□□□□ -0.39
SMPD4P1-201ENST00000416717 NEDD4P46934 1319 aa12.61□□□□□ -0.39
SMPD4P1-201ENST00000416717 WDR33Q9C0J8 1336 aaKnown RBP12.61□□□□□ -0.39
SMPD4P1-201ENST00000416717 VPS37CA5D8V6 355 aaPredicted RBP12.6□□□□□ -0.39
SMPD4P1-201ENST00000416717 MINDY4BA8MYZ0 360 aa12.6□□□□□ -0.39
SMPD4P1-201ENST00000416717 SMIM22K7EJ46 135 aa12.6□□□□□ -0.39
SMPD4P1-201ENST00000416717 GSE1Q14687 1217 aa12.6□□□□□ -0.39
SMPD4P1-201ENST00000416717 GRIK5Q16478 980 aa12.6□□□□□ -0.39
SMPD4P1-201ENST00000416717 RRP12Q5JTH9 1297 aaKnown RBP12.6□□□□□ -0.39
SMPD4P1-201ENST00000416717 TBC1D16Q8TBP0 767 aa12.6□□□□□ -0.39
SMPD4P1-201ENST00000416717 DDX11Q96FC9 970 aa12.6□□□□□ -0.39
SMPD4P1-201ENST00000416717 AATFQ9NY61 560 aaKnown RBP eCLIP12.6□□□□□ -0.39
SMPD4P1-201ENST00000416717 GNAT2P19087 354 aa12.6□□□□□ -0.39
SMPD4P1-201ENST00000416717 ATP2B4P23634 1241 aa12.6□□□□□ -0.39
SMPD4P1-201ENST00000416717 CLEC17AQ6ZS10 378 aa12.6□□□□□ -0.39
SMPD4P1-201ENST00000416717 CYB5R4Q7L1T6 521 aa12.6□□□□□ -0.39
SMPD4P1-201ENST00000416717 DZIP1Q86YF9 867 aaKnown RBP12.6□□□□□ -0.39
SMPD4P1-201ENST00000416717 TDRD7Q8NHU6 1098 aaKnown RBP12.6□□□□□ -0.39
SMPD4P1-201ENST00000416717 ZNF219Q9P2Y4 722 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms