RNA–Protein interactions for RNA: ENST00000416438.6

LINC00475-202, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 2,506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-202ENST00000416438 GREM2Q9H772 168 aa17.13■□□□□ 0.33
LINC00475-202ENST00000416438 NEDD4P46934 1319 aa17.13■□□□□ 0.33
LINC00475-202ENST00000416438 A0A1W2PQ27 194 aa17.13■□□□□ 0.33
LINC00475-202ENST00000416438 A0A1W2PQ64 194 aa17.13■□□□□ 0.33
LINC00475-202ENST00000416438 A0A1W2PQD8 194 aa17.13■□□□□ 0.33
LINC00475-202ENST00000416438 ZNF202O95125 648 aa17.13■□□□□ 0.33
LINC00475-202ENST00000416438 APPP05067 770 aa17.13■□□□□ 0.33
LINC00475-202ENST00000416438 PCCAP05165 728 aaPredicted RBP17.13■□□□□ 0.33
LINC00475-202ENST00000416438 CSF1RP07333 972 aa17.13■□□□□ 0.33
LINC00475-202ENST00000416438 SLC9C2Q5TAH2 1124 aa17.13■□□□□ 0.33
LINC00475-202ENST00000416438 SYNE3Q6ZMZ3 975 aa17.13■□□□□ 0.33
LINC00475-202ENST00000416438 NBPF11Q86T75 865 aa17.13■□□□□ 0.33
LINC00475-202ENST00000416438 INCENPQ9NQS7 918 aa17.13■□□□□ 0.33
LINC00475-202ENST00000416438 NUP188Q5SRE5 1749 aa17.12■□□□□ 0.33
LINC00475-202ENST00000416438 DHX16O60231 1041 aaKnown RBP17.12■□□□□ 0.33
LINC00475-202ENST00000416438 WDHD1O75717 1129 aaPredicted RBP17.12■□□□□ 0.33
LINC00475-202ENST00000416438 RBM6P78332 1123 aaKnown RBP17.12■□□□□ 0.33
LINC00475-202ENST00000416438 KIF23Q02241 960 aaPredicted RBP17.12■□□□□ 0.33
LINC00475-202ENST00000416438 CYB5R4Q7L1T6 521 aa17.12■□□□□ 0.33
LINC00475-202ENST00000416438 TBC1D10CQ8IV04 446 aa17.12■□□□□ 0.33
LINC00475-202ENST00000416438 ZBTB38Q8NAP3 1195 aaPredicted RBP17.12■□□□□ 0.33
LINC00475-202ENST00000416438 CCDC112Q8NEF3 446 aa17.12■□□□□ 0.33
LINC00475-202ENST00000416438 KCNG4Q8TDN1 519 aa17.12■□□□□ 0.33
LINC00475-202ENST00000416438 POLR3EQ9NVU0 708 aa17.12■□□□□ 0.33
LINC00475-202ENST00000416438 NWD2Q9ULI1 1742 aa17.12■□□□□ 0.33
LINC00475-202ENST00000416438 IDH1O75874 414 aaKnown RBP17.12■□□□□ 0.33
LINC00475-202ENST00000416438 ITGA6P23229 1130 aa17.12■□□□□ 0.33
LINC00475-202ENST00000416438 NAT10Q9H0A0 1025 aaKnown RBP17.12■□□□□ 0.33
LINC00475-202ENST00000416438 TMOD3Q9NYL9 352 aa17.12■□□□□ 0.33
LINC00475-202ENST00000416438 SLAIN2Q9P270 581 aa17.12■□□□□ 0.33
LINC00475-202ENST00000416438 RIPOR2Q9Y4F9 1068 aa17.12■□□□□ 0.33
LINC00475-202ENST00000416438 YEATS4O95619 227 aa17.11■□□□□ 0.33
LINC00475-202ENST00000416438 EVA1CP58658 441 aa17.11■□□□□ 0.33
LINC00475-202ENST00000416438 AXDND1Q5T1B0 1012 aaPredicted RBP17.11■□□□□ 0.33
LINC00475-202ENST00000416438 ANO1Q5XXA6 986 aa17.11■□□□□ 0.33
LINC00475-202ENST00000416438 KIF6Q6ZMV9 814 aa17.11■□□□□ 0.33
LINC00475-202ENST00000416438 PHKBQ93100 1093 aa17.11■□□□□ 0.33
LINC00475-202ENST00000416438 CHMP4CQ96CF2 233 aa17.11■□□□□ 0.33
LINC00475-202ENST00000416438 CARD10Q9BWT7 1032 aa17.11■□□□□ 0.33
LINC00475-202ENST00000416438 PIH1D3Q9NQM4 214 aaKnown RBP17.11■□□□□ 0.33
LINC00475-202ENST00000416438 UBR2Q8IWV8 1755 aa17.11■□□□□ 0.33
LINC00475-202ENST00000416438 SOS2Q07890 1332 aaPredicted RBP17.11■□□□□ 0.33
LINC00475-202ENST00000416438 UBE2Q2LH0YL09 131 aa17.11■□□□□ 0.33
LINC00475-202ENST00000416438 SLC3A2P08195 630 aaKnown RBP17.11■□□□□ 0.33
LINC00475-202ENST00000416438 ZRSR1Q15695 479 aaKnown RBP17.11■□□□□ 0.33
LINC00475-202ENST00000416438 MYH15Q9Y2K3 1946 aa17.11■□□□□ 0.33
LINC00475-202ENST00000416438 SMC2O95347 1197 aa17.1■□□□□ 0.33
LINC00475-202ENST00000416438 PFKFB1P16118 471 aa17.1■□□□□ 0.33
LINC00475-202ENST00000416438 ADD2P35612 726 aa17.1■□□□□ 0.33
LINC00475-202ENST00000416438 SMAP1Q8IYB5 467 aaPredicted RBP17.1■□□□□ 0.33
LINC00475-202ENST00000416438 TTLL11Q8NHH1 800 aa17.1■□□□□ 0.33
LINC00475-202ENST00000416438 XPO4Q9C0E2 1151 aaKnown RBP17.1■□□□□ 0.33
LINC00475-202ENST00000416438 CNNM1Q9NRU3 951 aa17.1■□□□□ 0.33
LINC00475-202ENST00000416438 IFNKQ9P0W0 207 aa17.1■□□□□ 0.33
LINC00475-202ENST00000416438 PAXBP1Q9Y5B6 917 aa17.1■□□□□ 0.33
LINC00475-202ENST00000416438 B4E1Z4 1266 aa17.1■□□□□ 0.33
LINC00475-202ENST00000416438 CDC27P30260 824 aa17.1■□□□□ 0.33
LINC00475-202ENST00000416438 TRIM28Q13263 835 aaKnown RBP17.1■□□□□ 0.33
LINC00475-202ENST00000416438 PTPN14Q15678 1187 aa17.1■□□□□ 0.33
LINC00475-202ENST00000416438 PIGBQ92521 554 aa17.1■□□□□ 0.33
LINC00475-202ENST00000416438 SYTL4Q96C24 671 aaPredicted RBP17.1■□□□□ 0.33
LINC00475-202ENST00000416438 ALG1Q9BT22 464 aa17.1■□□□□ 0.33
LINC00475-202ENST00000416438 MYL10Q9BUA6 226 aa17.1■□□□□ 0.33
LINC00475-202ENST00000416438 MROH7-TTC4A0A0A0MT08 1334 aa17.09■□□□□ 0.33
LINC00475-202ENST00000416438 TRDNQ13061 729 aa17.09■□□□□ 0.33
LINC00475-202ENST00000416438 BRAPQ7Z569 592 aa17.09■□□□□ 0.33
LINC00475-202ENST00000416438 HELBQ8NG08 1087 aaPredicted RBP17.09■□□□□ 0.33
LINC00475-202ENST00000416438 FBXO3Q9UK99 471 aa17.09■□□□□ 0.33
LINC00475-202ENST00000416438 NEMFO60524 1076 aa17.09■□□□□ 0.33
LINC00475-202ENST00000416438 MICU3Q86XE3 530 aa17.09■□□□□ 0.33
LINC00475-202ENST00000416438 PLA2G12BQ9BX93 195 aa17.09■□□□□ 0.33
LINC00475-202ENST00000416438 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.09■□□□□ 0.33
LINC00475-202ENST00000416438 V9GYY5 206 aaPredicted RBP17.09■□□□□ 0.33
LINC00475-202ENST00000416438 ZNF335Q9H4Z2 1342 aaPredicted RBP17.08■□□□□ 0.33
LINC00475-202ENST00000416438 PHKA1P46020 1223 aa17.08■□□□□ 0.33
LINC00475-202ENST00000416438 METAP2P50579 478 aaKnown RBP eCLIP17.08■□□□□ 0.33
LINC00475-202ENST00000416438 RIC1Q4ADV7 1423 aa17.08■□□□□ 0.33
LINC00475-202ENST00000416438 NYAP1Q6ZVC0 841 aa17.08■□□□□ 0.33
LINC00475-202ENST00000416438 TMC6Q7Z403 805 aa17.08■□□□□ 0.33
LINC00475-202ENST00000416438 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.08■□□□□ 0.33
LINC00475-202ENST00000416438 PRDM4Q9UKN5 801 aa17.08■□□□□ 0.33
LINC00475-202ENST00000416438 WWC3Q9ULE0 1092 aa17.08■□□□□ 0.33
LINC00475-202ENST00000416438 ANGEL1Q9UNK9 670 aaKnown RBP17.08■□□□□ 0.33
LINC00475-202ENST00000416438 ZNF532Q9HCE3 1301 aa17.08■□□□□ 0.32
LINC00475-202ENST00000416438 SNAP23O00161 211 aa17.08■□□□□ 0.32
LINC00475-202ENST00000416438 KRT40Q6A162 431 aa17.08■□□□□ 0.32
LINC00475-202ENST00000416438 NLRP10Q86W26 655 aa17.08■□□□□ 0.32
LINC00475-202ENST00000416438 CCAR2Q8N163 923 aaKnown RBP17.08■□□□□ 0.32
LINC00475-202ENST00000416438 TNS2Q63HR2 1409 aa17.07■□□□□ 0.32
LINC00475-202ENST00000416438 CMA1P23946 247 aa17.07■□□□□ 0.32
LINC00475-202ENST00000416438 LMOD1P29536 600 aaPredicted RBP17.07■□□□□ 0.32
LINC00475-202ENST00000416438 NCAPHQ15003 741 aa17.07■□□□□ 0.32
LINC00475-202ENST00000416438 GIGYF2Q6Y7W6 1299 aaKnown RBP17.07■□□□□ 0.32
LINC00475-202ENST00000416438 VPS37DQ86XT2 251 aa17.07■□□□□ 0.32
LINC00475-202ENST00000416438 CLIC6Q96NY7 704 aa17.07■□□□□ 0.32
LINC00475-202ENST00000416438 SHANK3Q9BYB0 1731 aa17.07■□□□□ 0.32
LINC00475-202ENST00000416438 NLRP12P59046 1061 aa17.07■□□□□ 0.32
LINC00475-202ENST00000416438 SLC39A14Q15043 492 aa17.07■□□□□ 0.32
LINC00475-202ENST00000416438 ARMCX5Q6P1M9 558 aa17.07■□□□□ 0.32
LINC00475-202ENST00000416438 MAP3K15Q6ZN16 1313 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms