RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 FOSBP53539 338 aa8.98□□□□□ -0.97
SIK3-203ENST00000415541 DNM1Q05193 864 aaKnown RBP8.98□□□□□ -0.97
SIK3-203ENST00000415541 GCKRQ14397 625 aa8.98□□□□□ -0.97
SIK3-203ENST00000415541 STK11IPQ8N1F8 1099 aa8.98□□□□□ -0.97
SIK3-203ENST00000415541 SCAND2PQ9GZW5 306 aaPredicted RBP8.98□□□□□ -0.97
SIK3-203ENST00000415541 TNS3Q68CZ2 1445 aa8.98□□□□□ -0.97
SIK3-203ENST00000415541 TTC36A6NLP5 189 aa8.98□□□□□ -0.97
SIK3-203ENST00000415541 TADA3O75528 432 aa8.98□□□□□ -0.97
SIK3-203ENST00000415541 KCNJ6P48051 423 aa8.98□□□□□ -0.97
SIK3-203ENST00000415541 TUBB4BP68371 445 aa8.98□□□□□ -0.97
SIK3-203ENST00000415541 NBPF10Q6P3W6 841 aaKnown RBP8.98□□□□□ -0.97
SIK3-203ENST00000415541 RABGGTAQ92696 567 aa8.98□□□□□ -0.97
SIK3-203ENST00000415541 PPP1R13BQ96KQ4 1090 aa8.98□□□□□ -0.97
SIK3-203ENST00000415541 TMX4Q9H1E5 349 aaPredicted RBP8.98□□□□□ -0.97
SIK3-203ENST00000415541 VPS37CA5D8V6 355 aaPredicted RBP8.97□□□□□ -0.97
SIK3-203ENST00000415541 CCDC151A5D8V7 595 aa8.97□□□□□ -0.97
SIK3-203ENST00000415541 PLBD2Q8NHP8 589 aa8.97□□□□□ -0.97
SIK3-203ENST00000415541 GOLGA1Q92805 767 aa8.97□□□□□ -0.97
SIK3-203ENST00000415541 ZNF594Q96JF6 807 aaPredicted RBP8.97□□□□□ -0.97
SIK3-203ENST00000415541 DNAJC25Q9H1X3 360 aa8.97□□□□□ -0.97
SIK3-203ENST00000415541 KDRP35968 1356 aa8.97□□□□□ -0.97
SIK3-203ENST00000415541 TMCO5BA8MYB1 307 aa8.97□□□□□ -0.97
SIK3-203ENST00000415541 ZSCAN12O43309 604 aa8.97□□□□□ -0.97
SIK3-203ENST00000415541 ZPR1O75312 459 aa8.97□□□□□ -0.97
SIK3-203ENST00000415541 CCZ1BP86790 482 aa8.97□□□□□ -0.97
SIK3-203ENST00000415541 CCZ1P86791 482 aaPredicted RBP8.97□□□□□ -0.97
SIK3-203ENST00000415541 SEMA3FQ13275 785 aa8.97□□□□□ -0.97
SIK3-203ENST00000415541 AP1ARQ63HQ0 302 aa8.97□□□□□ -0.97
SIK3-203ENST00000415541 DDX46Q7L014 1031 aaKnown RBP8.97□□□□□ -0.97
SIK3-203ENST00000415541 HELBQ8NG08 1087 aaPredicted RBP8.97□□□□□ -0.97
SIK3-203ENST00000415541 BICD2Q8TD16 824 aa8.97□□□□□ -0.97
SIK3-203ENST00000415541 UTP14AQ9BVJ6 771 aaKnown RBP8.97□□□□□ -0.97
SIK3-203ENST00000415541 NEURL1BA8MQ27 555 aa8.97□□□□□ -0.97
SIK3-203ENST00000415541 EBAG9O00559 213 aa8.97□□□□□ -0.97
SIK3-203ENST00000415541 CTAGE5O15320 804 aa8.97□□□□□ -0.97
SIK3-203ENST00000415541 IDH1O75874 414 aaKnown RBP8.97□□□□□ -0.97
SIK3-203ENST00000415541 IFIT1P09914 478 aaKnown RBP8.97□□□□□ -0.97
SIK3-203ENST00000415541 LONRF2Q1L5Z9 754 aa8.97□□□□□ -0.97
SIK3-203ENST00000415541 PRPF40BQ6NWY9 871 aaKnown RBP8.97□□□□□ -0.97
SIK3-203ENST00000415541 FBXW7Q969H0 707 aa8.97□□□□□ -0.97
SIK3-203ENST00000415541 NBPF3Q9H094 633 aa8.97□□□□□ -0.97
SIK3-203ENST00000415541 CLSTN2Q9H4D0 955 aa8.97□□□□□ -0.97
SIK3-203ENST00000415541 DACT1Q9NYF0 836 aa8.97□□□□□ -0.97
SIK3-203ENST00000415541 LIMCH1Q9UPQ0 1083 aa8.97□□□□□ -0.97
SIK3-203ENST00000415541 EPB41L2O43491 1005 aaKnown RBP8.96□□□□□ -0.97
SIK3-203ENST00000415541 PDCP20941 246 aa8.96□□□□□ -0.97
SIK3-203ENST00000415541 HNRNPH1P31943 449 aaKnown RBP8.96□□□□□ -0.97
SIK3-203ENST00000415541 TIMM10P62072 90 aa8.96□□□□□ -0.97
SIK3-203ENST00000415541 APOBRQ0VD83 1088 aa8.96□□□□□ -0.97
SIK3-203ENST00000415541 CCDC102AQ96A19 550 aa8.96□□□□□ -0.97
SIK3-203ENST00000415541 CALR3Q96L12 384 aaKnown RBP8.96□□□□□ -0.97
SIK3-203ENST00000415541 NIP7Q9Y221 180 aaKnown RBP eCLIP8.96□□□□□ -0.97
SIK3-203ENST00000415541 CRB1P82279 1406 aa8.96□□□□□ -0.97
SIK3-203ENST00000415541 A0A1B0GUA9 196 aa8.96□□□□□ -0.98
SIK3-203ENST00000415541 ELF1P32519 619 aa8.96□□□□□ -0.98
SIK3-203ENST00000415541 TFCP2Q12800 502 aa8.96□□□□□ -0.98
SIK3-203ENST00000415541 MCM6Q14566 821 aa8.96□□□□□ -0.98
SIK3-203ENST00000415541 STX1AQ16623 288 aa8.96□□□□□ -0.98
SIK3-203ENST00000415541 FAM71BQ8TC56 605 aa8.96□□□□□ -0.98
SIK3-203ENST00000415541 JAKMIP1Q96N16 626 aaKnown RBP8.96□□□□□ -0.98
SIK3-203ENST00000415541 ESYT1Q9BSJ8 1104 aa8.96□□□□□ -0.98
SIK3-203ENST00000415541 A1CFQ9NQ94 594 aaKnown RBP8.96□□□□□ -0.98
SIK3-203ENST00000415541 USP21Q9UK80 565 aa8.96□□□□□ -0.98
SIK3-203ENST00000415541 SH3BP1Q9Y3L3 701 aa8.96□□□□□ -0.98
SIK3-203ENST00000415541 NDUFB9Q9Y6M9 179 aa8.96□□□□□ -0.98
SIK3-203ENST00000415541 MON2Q7Z3U7 1717 aa8.96□□□□□ -0.98
SIK3-203ENST00000415541 ANKRD18BA2A2Z9 1011 aa8.96□□□□□ -0.98
SIK3-203ENST00000415541 GOLGA6L9A6NEM1 432 aa8.96□□□□□ -0.98
SIK3-203ENST00000415541 IRF6O14896 467 aa8.96□□□□□ -0.98
SIK3-203ENST00000415541 C21orf2O43822 256 aa8.96□□□□□ -0.98
SIK3-203ENST00000415541 SASH3O75995 380 aa8.96□□□□□ -0.98
SIK3-203ENST00000415541 PIGBQ92521 554 aa8.96□□□□□ -0.98
SIK3-203ENST00000415541 FUT8Q9BYC5 575 aa8.96□□□□□ -0.98
SIK3-203ENST00000415541 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.96□□□□□ -0.98
SIK3-203ENST00000415541 KLHL33A6NCF5 533 aa8.95□□□□□ -0.98
SIK3-203ENST00000415541 STK3Q13188 491 aa8.95□□□□□ -0.98
SIK3-203ENST00000415541 TEX11Q8IYF3 940 aa8.95□□□□□ -0.98
SIK3-203ENST00000415541 CCDC24Q8N4L8 307 aa8.95□□□□□ -0.98
SIK3-203ENST00000415541 MIEF2Q96C03 454 aa8.95□□□□□ -0.98
SIK3-203ENST00000415541 ZSCAN31Q96LW9 406 aaPredicted RBP8.95□□□□□ -0.98
SIK3-203ENST00000415541 FAM210AQ96ND0 272 aa8.95□□□□□ -0.98
SIK3-203ENST00000415541 ZNF652Q9Y2D9 606 aa8.95□□□□□ -0.98
SIK3-203ENST00000415541 SSH2Q76I76 1423 aa8.95□□□□□ -0.98
SIK3-203ENST00000415541 HIP1O00291 1037 aa8.95□□□□□ -0.98
SIK3-203ENST00000415541 TUBBP07437 444 aa8.95□□□□□ -0.98
SIK3-203ENST00000415541 INPP5BP32019 993 aa8.95□□□□□ -0.98
SIK3-203ENST00000415541 IGHMBP2P38935 993 aaKnown RBP8.95□□□□□ -0.98
SIK3-203ENST00000415541 MAP9Q49MG5 647 aa8.95□□□□□ -0.98
SIK3-203ENST00000415541 CABS1Q96KC9 395 aa8.95□□□□□ -0.98
SIK3-203ENST00000415541 SPATA32Q96LK8 384 aa8.95□□□□□ -0.98
SIK3-203ENST00000415541 ABCF2Q9UG63 623 aa8.95□□□□□ -0.98
SIK3-203ENST00000415541 KIAA0754O94854 1291 aa8.95□□□□□ -0.98
SIK3-203ENST00000415541 CEP57L1Q8IYX8 460 aa8.95□□□□□ -0.98
SIK3-203ENST00000415541 MSL3Q8N5Y2 521 aaKnown RBP8.95□□□□□ -0.98
SIK3-203ENST00000415541 TRIM6Q9C030 488 aaPredicted RBP8.95□□□□□ -0.98
SIK3-203ENST00000415541 PDE11AQ9HCR9 933 aa8.95□□□□□ -0.98
SIK3-203ENST00000415541 ANO10Q9NW15 660 aa8.95□□□□□ -0.98
SIK3-203ENST00000415541 IQSEC3Q9UPP2 1182 aaPredicted RBP8.95□□□□□ -0.98
SIK3-203ENST00000415541 IRS4O14654 1257 aaPredicted RBP8.94□□□□□ -0.98
SIK3-203ENST00000415541 LIG3P49916 1009 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms