RNA–Protein interactions for RNA: ENST00000414887.1

SNX3P1X-201, Transcript of sorting nexin 3 pseudogene 1 X-linked, humanhuman

BASIC

Gene SNX3P1X, Length 175 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3P1X-201ENST00000414887 CSPG5O95196 566 aa-0.17□□□□□ -2.44
SNX3P1X-201ENST00000414887 IGFBP1P08833 259 aaPredicted RBP-0.17□□□□□ -2.44
SNX3P1X-201ENST00000414887 HNRNPLP14866 589 aaKnown RBP eCLIP-0.17□□□□□ -2.44
SNX3P1X-201ENST00000414887 COL8A1P27658 744 aa-0.17□□□□□ -2.44
SNX3P1X-201ENST00000414887 PRIM1P49642 420 aaKnown RBP-0.17□□□□□ -2.44
SNX3P1X-201ENST00000414887 KCNQ1P51787 676 aa-0.17□□□□□ -2.44
SNX3P1X-201ENST00000414887 GRSF1Q12849 480 aaKnown RBP eCLIP-0.17□□□□□ -2.44
SNX3P1X-201ENST00000414887 AMHR2Q16671 573 aa-0.17□□□□□ -2.44
SNX3P1X-201ENST00000414887 KRTAP6-1Q3LI64 71 aa-0.17□□□□□ -2.44
SNX3P1X-201ENST00000414887 ELOA3BQ3SY89 546 aa-0.17□□□□□ -2.44
SNX3P1X-201ENST00000414887 GPR158Q5T848 1215 aa-0.17□□□□□ -2.44
SNX3P1X-201ENST00000414887 MCTP2Q6DN12 878 aa-0.17□□□□□ -2.44
SNX3P1X-201ENST00000414887 USP51Q70EK9 711 aa-0.17□□□□□ -2.44
SNX3P1X-201ENST00000414887 KRT28Q7Z3Y7 464 aa-0.17□□□□□ -2.44
SNX3P1X-201ENST00000414887 BMP8AQ7Z5Y6 402 aa-0.17□□□□□ -2.44
SNX3P1X-201ENST00000414887 FRMD5Q7Z6J6 570 aa-0.17□□□□□ -2.44
SNX3P1X-201ENST00000414887 CTU1Q7Z7A3 348 aaKnown RBP-0.17□□□□□ -2.44
SNX3P1X-201ENST00000414887 PRAG1Q86YV5 1406 aa-0.17□□□□□ -2.44
SNX3P1X-201ENST00000414887 CCDC116Q8IYX3 515 aa-0.17□□□□□ -2.44
SNX3P1X-201ENST00000414887 PROCA1Q8NCQ7 364 aaPredicted RBP-0.17□□□□□ -2.44
SNX3P1X-201ENST00000414887 ELOA3Q8NG57 546 aa-0.17□□□□□ -2.44
SNX3P1X-201ENST00000414887 VWCEQ96DN2 955 aa-0.17□□□□□ -2.44
SNX3P1X-201ENST00000414887 SCARF2Q96GP6 870 aaPredicted RBP-0.17□□□□□ -2.44
SNX3P1X-201ENST00000414887 RIPOR3Q96MK2 946 aa-0.17□□□□□ -2.44
SNX3P1X-201ENST00000414887 GDF15Q99988 308 aa-0.17□□□□□ -2.44
SNX3P1X-201ENST00000414887 SNRKQ9NRH2 765 aa-0.17□□□□□ -2.44
SNX3P1X-201ENST00000414887 RXFP3Q9NSD7 469 aa-0.17□□□□□ -2.44
SNX3P1X-201ENST00000414887 CXXC1Q9P0U4 656 aaPredicted RBP-0.17□□□□□ -2.44
SNX3P1X-201ENST00000414887 GABBR1Q9UBS5 961 aa-0.17□□□□□ -2.44
SNX3P1X-201ENST00000414887 AMMECR1Q9Y4X0 333 aaPredicted RBP-0.17□□□□□ -2.44
SNX3P1X-201ENST00000414887 KLF2Q9Y5W3 355 aaPredicted RBP-0.17□□□□□ -2.44
SNX3P1X-201ENST00000414887 WDR33Q9C0J8 1336 aaKnown RBP-0.17□□□□□ -2.44
SNX3P1X-201ENST00000414887 PLXNB1O43157 2135 aa-0.17□□□□□ -2.44
SNX3P1X-201ENST00000414887 TULP4Q9NRJ4 1543 aa-0.18□□□□□ -2.44
SNX3P1X-201ENST00000414887 DNAH6Q9C0G6 4158 aa-0.18□□□□□ -2.44
SNX3P1X-201ENST00000414887 NUTM2FA1L443 756 aa-0.18□□□□□ -2.44
SNX3P1X-201ENST00000414887 RASSF10A6NK89 507 aa-0.18□□□□□ -2.44
SNX3P1X-201ENST00000414887 TERTO14746 1132 aaKnown RBP-0.18□□□□□ -2.44
SNX3P1X-201ENST00000414887 SCAF4O95104 1147 aaKnown RBP-0.18□□□□□ -2.44
SNX3P1X-201ENST00000414887 C8AP07357 584 aa-0.18□□□□□ -2.44
SNX3P1X-201ENST00000414887 ARAFP10398 606 aa-0.18□□□□□ -2.44
SNX3P1X-201ENST00000414887 KRT13P13646 458 aa-0.18□□□□□ -2.44
SNX3P1X-201ENST00000414887 LINC01547P58512 204 aaPredicted RBP-0.18□□□□□ -2.44
SNX3P1X-201ENST00000414887 NKX6-1P78426 367 aaPredicted RBP-0.18□□□□□ -2.44
SNX3P1X-201ENST00000414887 IFT88Q13099 833 aa-0.18□□□□□ -2.44
SNX3P1X-201ENST00000414887 PKN1Q16512 942 aa-0.18□□□□□ -2.44
SNX3P1X-201ENST00000414887 PKN2Q16513 984 aaKnown RBP-0.18□□□□□ -2.44
SNX3P1X-201ENST00000414887 PCSK4Q6UW60 755 aa-0.18□□□□□ -2.44
SNX3P1X-201ENST00000414887 ADAMTSL4Q6UY14 1074 aa-0.18□□□□□ -2.44
SNX3P1X-201ENST00000414887 Q6ZS46 218 aa-0.18□□□□□ -2.44
SNX3P1X-201ENST00000414887 PIP4P1Q86T03 277 aa-0.18□□□□□ -2.44
SNX3P1X-201ENST00000414887 DEFB119Q8N690 84 aa-0.18□□□□□ -2.44
SNX3P1X-201ENST00000414887 SLAIN1Q8ND83 568 aa-0.18□□□□□ -2.44
SNX3P1X-201ENST00000414887 HNRNPLLQ8WVV9 542 aaKnown RBP-0.18□□□□□ -2.44
SNX3P1X-201ENST00000414887 RIN2Q8WYP3 895 aaPredicted RBP-0.18□□□□□ -2.44
SNX3P1X-201ENST00000414887 HOXB13Q92826 284 aaPredicted RBP-0.18□□□□□ -2.44
SNX3P1X-201ENST00000414887 SLITRK1Q96PX8 696 aa-0.18□□□□□ -2.44
SNX3P1X-201ENST00000414887 TCF20Q9UGU0 1960 aaKnown RBP-0.18□□□□□ -2.44
SNX3P1X-201ENST00000414887 CUL7Q14999 1698 aa-0.18□□□□□ -2.44
SNX3P1X-201ENST00000414887 SPATA31A6Q5VVP1 1343 aa-0.18□□□□□ -2.44
SNX3P1X-201ENST00000414887 MIA3Q5JRA6 1907 aa-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 JCADQ9P266 1359 aa-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 CC2D2AQ9P2K1 1620 aa-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 FAM221AA4D161 298 aa-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 CAPN9O14815 690 aa-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 TLL1O43897 1013 aa-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 KDM4AO75164 1064 aa-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 SMR3BP02814 79 aaPredicted RBP-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 PRF1P14222 555 aa-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 ITGB6P18564 788 aa-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 FECHP22830 423 aa-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 SFPQP23246 707 aaKnown RBP eCLIP-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 KRTAP10-2P60368 255 aa-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 KRTAP10-9P60411 292 aa-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 POLA2Q14181 598 aa-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 HIC1Q14526 733 aa-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 LAPTM4AQ15012 233 aa-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 CASC10Q5T4H9 136 aa-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 TMEM198Q66K66 360 aa-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 HEATR6Q6AI08 1181 aaKnown RBP-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 SH3RF1Q7Z6J0 888 aa-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 TDHQ8IZJ6 230 aa-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 FAM26EQ8N5C1 309 aa-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 SGMS2Q8NHU3 365 aa-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 ZNF398Q8TD17 642 aa-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 GTF3C2Q8WUA4 911 aaPredicted RBP-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 NUDT8Q8WV74 236 aa-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 TMIGD2Q96BF3 282 aa-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 SLC4A9Q96Q91 983 aa-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 SLC12A9Q9BXP2 914 aa-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 TRIM4Q9C037 500 aa-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 SUV39H2Q9H5I1 410 aa-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 CHIC2Q9UKJ5 165 aa-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 CDV3Q9UKY7 258 aaKnown RBP-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 RPH3AQ9Y2J0 694 aaPredicted RBP-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 ABCC10Q5T3U5 1492 aa-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 ATAD2BQ9ULI0 1458 aa-0.19□□□□□ -2.44
SNX3P1X-201ENST00000414887 CFAP43Q8NDM7 1665 aa-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms