RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 CCDC102AQ96A19 550 aa32.64■■■□□ 2.82
VEGFA-207ENST00000413642 TSKSQ9UJT2 592 aa32.64■■■□□ 2.82
VEGFA-207ENST00000413642 SLC10A3P09131 477 aa32.63■■■□□ 2.81
VEGFA-207ENST00000413642 NF2P35240 595 aa32.63■■■□□ 2.81
VEGFA-207ENST00000413642 KIF23Q02241 960 aaPredicted RBP32.63■■■□□ 2.81
VEGFA-207ENST00000413642 SPDYE2Q495Y8 402 aa32.63■■■□□ 2.81
VEGFA-207ENST00000413642 IFFO2Q5TF58 517 aa32.62■■■□□ 2.81
VEGFA-207ENST00000413642 RASAL3Q86YV0 1011 aa32.62■■■□□ 2.81
VEGFA-207ENST00000413642 BEGAINQ9BUH8 593 aa32.62■■■□□ 2.81
VEGFA-207ENST00000413642 PAPPA2Q9BXP8 1791 aa32.62■■■□□ 2.81
VEGFA-207ENST00000413642 A0A1B0GUL7 405 aa32.61■■■□□ 2.81
VEGFA-207ENST00000413642 ATP8B2P98198 1209 aa32.61■■■□□ 2.81
VEGFA-207ENST00000413642 POLA2Q14181 598 aa32.61■■■□□ 2.81
VEGFA-207ENST00000413642 RASA3Q14644 834 aa32.61■■■□□ 2.81
VEGFA-207ENST00000413642 CCDC102BQ68D86 513 aa32.61■■■□□ 2.81
VEGFA-207ENST00000413642 WDR66Q8TBY9 1149 aa32.61■■■□□ 2.81
VEGFA-207ENST00000413642 GNL3LQ9NVN8 582 aaKnown RBP32.61■■■□□ 2.81
VEGFA-207ENST00000413642 TEKT1Q969V4 418 aa32.6■■■□□ 2.81
VEGFA-207ENST00000413642 HDLBPQ00341 1268 aaKnown RBP32.59■■■□□ 2.81
VEGFA-207ENST00000413642 G3BP1Q13283 466 aaKnown RBP eCLIP32.59■■■□□ 2.81
VEGFA-207ENST00000413642 NBPF12Q5TAG4 269 aaPredicted RBP32.59■■■□□ 2.81
VEGFA-207ENST00000413642 TNS4Q8IZW8 715 aa32.59■■■□□ 2.81
VEGFA-207ENST00000413642 XAGE2Q96GT9 111 aa32.59■■■□□ 2.81
VEGFA-207ENST00000413642 PRDM10Q9NQV6 1147 aa32.59■■■□□ 2.81
VEGFA-207ENST00000413642 SSC5DA1L4H1 1573 aa32.58■■■□□ 2.81
VEGFA-207ENST00000413642 ARAP2Q8WZ64 1704 aa32.58■■■□□ 2.81
VEGFA-207ENST00000413642 TCP10L2B9ZVM9 353 aa32.58■■■□□ 2.81
VEGFA-207ENST00000413642 CACNB3P54284 484 aa32.58■■■□□ 2.81
VEGFA-207ENST00000413642 SSH3Q8TE77 659 aa32.58■■■□□ 2.81
VEGFA-207ENST00000413642 NEUROD6Q96NK8 337 aa32.58■■■□□ 2.81
VEGFA-207ENST00000413642 ANGEL1Q9UNK9 670 aaKnown RBP32.58■■■□□ 2.81
VEGFA-207ENST00000413642 AKAP2Q9Y2D5 859 aa32.58■■■□□ 2.81
VEGFA-207ENST00000413642 PPP2R3BQ9Y5P8 575 aa32.58■■■□□ 2.81
VEGFA-207ENST00000413642 ARMC9Q7Z3E5 817 aa32.57■■■□□ 2.8
VEGFA-207ENST00000413642 CDAN1Q8IWY9 1227 aa32.57■■■□□ 2.8
VEGFA-207ENST00000413642 SUGT1Q9Y2Z0 365 aa32.57■■■□□ 2.8
VEGFA-207ENST00000413642 PRDX5P30044 214 aa32.56■■■□□ 2.8
VEGFA-207ENST00000413642 APOBEC3HQ6NTF7 200 aaKnown RBP32.56■■■□□ 2.8
VEGFA-207ENST00000413642 RCAN3Q9UKA8 241 aa32.56■■■□□ 2.8
VEGFA-207ENST00000413642 DENND2AQ9ULE3 1009 aa32.56■■■□□ 2.8
VEGFA-207ENST00000413642 RASGRF1Q13972 1273 aa32.55■■■□□ 2.8
VEGFA-207ENST00000413642 ZDHHC15Q96MV8 337 aa32.55■■■□□ 2.8
VEGFA-207ENST00000413642 MRIQ9BWK5 157 aa32.55■■■□□ 2.8
VEGFA-207ENST00000413642 ZBTB4Q9P1Z0 1013 aaPredicted RBP32.55■■■□□ 2.8
VEGFA-207ENST00000413642 DIXDC1Q155Q3 683 aa32.54■■■□□ 2.8
VEGFA-207ENST00000413642 LDLRAD1Q5T700 205 aa32.54■■■□□ 2.8
VEGFA-207ENST00000413642 CSRNP1Q96S65 589 aa32.54■■■□□ 2.8
VEGFA-207ENST00000413642 MAST3O60307 1309 aa32.53■■■□□ 2.8
VEGFA-207ENST00000413642 SEMA3EO15041 775 aa32.53■■■□□ 2.8
VEGFA-207ENST00000413642 MKRN3Q13064 507 aaKnown RBP32.53■■■□□ 2.8
VEGFA-207ENST00000413642 HHIPL2Q6UWX4 724 aa32.53■■■□□ 2.8
VEGFA-207ENST00000413642 TMEM39BQ9GZU3 492 aa32.53■■■□□ 2.8
VEGFA-207ENST00000413642 SURF6O75683 361 aaKnown RBP32.52■■■□□ 2.8
VEGFA-207ENST00000413642 SUPT20HL1Q3ZLR7 823 aa32.52■■■□□ 2.8
VEGFA-207ENST00000413642 TEPSINQ96N21 525 aa32.52■■■□□ 2.8
VEGFA-207ENST00000413642 TNFAIP1Q13829 316 aa32.51■■■□□ 2.79
VEGFA-207ENST00000413642 MVPQ14764 893 aaKnown RBP32.51■■■□□ 2.79
VEGFA-207ENST00000413642 SALL1Q9NSC2 1324 aa32.51■■■□□ 2.79
VEGFA-207ENST00000413642 LDHBP07195 334 aaKnown RBP32.5■■■□□ 2.79
VEGFA-207ENST00000413642 OS9Q13438 667 aaPredicted RBP32.5■■■□□ 2.79
VEGFA-207ENST00000413642 CEP85Q6P2H3 762 aa32.5■■■□□ 2.79
VEGFA-207ENST00000413642 CLMNQ96JQ2 1002 aa32.5■■■□□ 2.79
VEGFA-207ENST00000413642 COG6Q9Y2V7 657 aa32.5■■■□□ 2.79
VEGFA-207ENST00000413642 DAGLAQ9Y4D2 1042 aa32.5■■■□□ 2.79
VEGFA-207ENST00000413642 ECM29Q5VYK3 1845 aa32.49■■■□□ 2.79
VEGFA-207ENST00000413642 USP2O75604 605 aaPredicted RBP32.49■■■□□ 2.79
VEGFA-207ENST00000413642 MAP3K11Q16584 847 aa32.49■■■□□ 2.79
VEGFA-207ENST00000413642 CA12O43570 354 aa32.48■■■□□ 2.79
VEGFA-207ENST00000413642 PPP1R12BO60237 982 aaPredicted RBP32.48■■■□□ 2.79
VEGFA-207ENST00000413642 GORABQ5T7V8 394 aa32.48■■■□□ 2.79
VEGFA-207ENST00000413642 PI16Q6UXB8 463 aa32.48■■■□□ 2.79
VEGFA-207ENST00000413642 RNF186Q9NXI6 227 aa32.48■■■□□ 2.79
VEGFA-207ENST00000413642 ZBTB22O15209 634 aa32.47■■■□□ 2.79
VEGFA-207ENST00000413642 MS4A1P11836 297 aa32.47■■■□□ 2.79
VEGFA-207ENST00000413642 TNNI2P48788 182 aa32.47■■■□□ 2.79
VEGFA-207ENST00000413642 NOP58Q9Y2X3 529 aaKnown RBP32.47■■■□□ 2.79
VEGFA-207ENST00000413642 HMG20BQ9P0W2 317 aa32.46■■■□□ 2.79
VEGFA-207ENST00000413642 ABCF2Q9UG63 623 aa32.46■■■□□ 2.79
VEGFA-207ENST00000413642 TRPA1O75762 1119 aa32.45■■■□□ 2.79
VEGFA-207ENST00000413642 TNNI3KQ59H18 835 aa32.45■■■□□ 2.79
VEGFA-207ENST00000413642 CDC42EP5Q6NZY7 148 aa32.45■■■□□ 2.79
VEGFA-207ENST00000413642 TMOD2Q9NZR1 351 aa32.45■■■□□ 2.79
VEGFA-207ENST00000413642 FPGT-TNNI3KV9GXZ4 949 aa32.45■■■□□ 2.79
VEGFA-207ENST00000413642 C20orf194Q5TEA3 1177 aa32.44■■■□□ 2.78
VEGFA-207ENST00000413642 SLC10A4Q96EP9 437 aa32.44■■■□□ 2.78
VEGFA-207ENST00000413642 DBNDD2Q9BQY9 259 aa32.44■■■□□ 2.78
VEGFA-207ENST00000413642 SPRYD7Q5W111 196 aa32.43■■■□□ 2.78
VEGFA-207ENST00000413642 TBC1D9Q6ZT07 1266 aa32.43■■■□□ 2.78
VEGFA-207ENST00000413642 PDS5AQ29RF7 1337 aaKnown RBP32.43■■■□□ 2.78
VEGFA-207ENST00000413642 IREB2P48200 963 aaKnown RBP32.42■■■□□ 2.78
VEGFA-207ENST00000413642 SPATA5Q8NB90 893 aa32.42■■■□□ 2.78
VEGFA-207ENST00000413642 GPR108Q9NPR9 543 aa32.42■■■□□ 2.78
VEGFA-207ENST00000413642 ARID4AP29374 1257 aaPredicted RBP32.41■■■□□ 2.78
VEGFA-207ENST00000413642 ZGPATQ8N5A5 531 aaKnown RBP32.41■■■□□ 2.78
VEGFA-207ENST00000413642 USP40Q9NVE5 1235 aa32.41■■■□□ 2.78
VEGFA-207ENST00000413642 EXOC6BQ9Y2D4 811 aa32.41■■■□□ 2.78
VEGFA-207ENST00000413642 MYH13Q9UKX3 1938 aa32.41■■■□□ 2.78
VEGFA-207ENST00000413642 CAPN15O75808 1086 aa32.4■■■□□ 2.78
VEGFA-207ENST00000413642 MCAMP43121 646 aa32.4■■■□□ 2.78
VEGFA-207ENST00000413642 NFIAQ12857 509 aa32.4■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms