RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 RASGRF1Q13972 1273 aa12.42□□□□□ -0.42
TMEM248-202ENST00000413593 PRMT6Q96LA8 375 aaPredicted RBP12.42□□□□□ -0.42
TMEM248-202ENST00000413593 MKRN1Q9UHC7 482 aaKnown RBP12.42□□□□□ -0.42
TMEM248-202ENST00000413593 ABT1Q9ULW3 272 aaKnown RBP12.42□□□□□ -0.42
TMEM248-202ENST00000413593 SCAF8Q9UPN6 1271 aaKnown RBP12.42□□□□□ -0.42
TMEM248-202ENST00000413593 PDS5AQ29RF7 1337 aaKnown RBP12.41□□□□□ -0.42
TMEM248-202ENST00000413593 SALL1Q9NSC2 1324 aa12.41□□□□□ -0.42
TMEM248-202ENST00000413593 RASSF10A6NK89 507 aa12.41□□□□□ -0.42
TMEM248-202ENST00000413593 CRKP46108 304 aa12.41□□□□□ -0.42
TMEM248-202ENST00000413593 HDLBPQ00341 1268 aaKnown RBP12.41□□□□□ -0.42
TMEM248-202ENST00000413593 GORABQ5T7V8 394 aa12.41□□□□□ -0.42
TMEM248-202ENST00000413593 APOBEC3FQ8IUX4 373 aaKnown RBP12.41□□□□□ -0.42
TMEM248-202ENST00000413593 CDCA5Q96FF9 252 aa12.41□□□□□ -0.42
TMEM248-202ENST00000413593 DBNDD2Q9BQY9 259 aa12.41□□□□□ -0.42
TMEM248-202ENST00000413593 TLL2Q9Y6L7 1015 aa12.41□□□□□ -0.42
TMEM248-202ENST00000413593 MAST3O60307 1309 aa12.4□□□□□ -0.42
TMEM248-202ENST00000413593 CLRN2A0PK11 232 aa12.4□□□□□ -0.42
TMEM248-202ENST00000413593 MYO1BO43795 1136 aa12.4□□□□□ -0.42
TMEM248-202ENST00000413593 ARID4AP29374 1257 aaPredicted RBP12.4□□□□□ -0.42
TMEM248-202ENST00000413593 PRDX5P30044 214 aa12.4□□□□□ -0.42
TMEM248-202ENST00000413593 DEFB115Q30KQ5 88 aa12.4□□□□□ -0.42
TMEM248-202ENST00000413593 HSP90AB4PQ58FF6 505 aa12.4□□□□□ -0.42
TMEM248-202ENST00000413593 SAPCD2Q86UD0 394 aa12.4□□□□□ -0.42
TMEM248-202ENST00000413593 ERC1Q8IUD2 1116 aa12.4□□□□□ -0.42
TMEM248-202ENST00000413593 JMYQ8N9B5 988 aa12.4□□□□□ -0.42
TMEM248-202ENST00000413593 TEKT1Q969V4 418 aa12.4□□□□□ -0.42
TMEM248-202ENST00000413593 EAF2Q96CJ1 260 aaPredicted RBP12.4□□□□□ -0.42
TMEM248-202ENST00000413593 MRIQ9BWK5 157 aa12.4□□□□□ -0.42
TMEM248-202ENST00000413593 GBA2Q9HCG7 927 aaPredicted RBP12.4□□□□□ -0.42
TMEM248-202ENST00000413593 ARAP2Q8WZ64 1704 aa12.4□□□□□ -0.43
TMEM248-202ENST00000413593 UQCRFS1P1P0C7P4 283 aa12.39□□□□□ -0.43
TMEM248-202ENST00000413593 SPDYE2Q495Y8 402 aa12.39□□□□□ -0.43
TMEM248-202ENST00000413593 PRAMEF18Q5VWM3 479 aa12.39□□□□□ -0.43
TMEM248-202ENST00000413593 HHIPL2Q6UWX4 724 aa12.39□□□□□ -0.43
TMEM248-202ENST00000413593 HMG20BQ9P0W2 317 aa12.39□□□□□ -0.43
TMEM248-202ENST00000413593 DBNLQ9UJU6 430 aaKnown RBP12.39□□□□□ -0.43
TMEM248-202ENST00000413593 LDHBP07195 334 aaKnown RBP12.38□□□□□ -0.43
TMEM248-202ENST00000413593 MCAMP43121 646 aa12.38□□□□□ -0.43
TMEM248-202ENST00000413593 VEGFBP49765 207 aa12.38□□□□□ -0.43
TMEM248-202ENST00000413593 DIXDC1Q155Q3 683 aa12.38□□□□□ -0.43
TMEM248-202ENST00000413593 PI16Q6UXB8 463 aa12.38□□□□□ -0.43
TMEM248-202ENST00000413593 ZGPATQ8N5A5 531 aaKnown RBP12.38□□□□□ -0.43
TMEM248-202ENST00000413593 C2orf69Q8N8R5 385 aa12.38□□□□□ -0.43
TMEM248-202ENST00000413593 SPATA5Q8NB90 893 aa12.38□□□□□ -0.43
TMEM248-202ENST00000413593 RHPN1Q8TCX5 695 aa12.38□□□□□ -0.43
TMEM248-202ENST00000413593 ZDHHC15Q96MV8 337 aa12.38□□□□□ -0.43
TMEM248-202ENST00000413593 CCDC8Q9H0W5 538 aaPredicted RBP12.38□□□□□ -0.43
TMEM248-202ENST00000413593 DEFB129Q9H1M3 183 aa12.38□□□□□ -0.43
TMEM248-202ENST00000413593 TDRD3Q9H7E2 651 aaKnown RBP12.38□□□□□ -0.43
TMEM248-202ENST00000413593 VEZTQ9HBM0 779 aa12.38□□□□□ -0.43
TMEM248-202ENST00000413593 TLR7Q9NYK1 1049 aaKnown RBP12.38□□□□□ -0.43
TMEM248-202ENST00000413593 ZNF70Q9UC06 446 aaPredicted RBP12.38□□□□□ -0.43
TMEM248-202ENST00000413593 APBB1O00213 710 aa12.37□□□□□ -0.43
TMEM248-202ENST00000413593 HUNKP57058 714 aa12.37□□□□□ -0.43
TMEM248-202ENST00000413593 CCDC158Q5M9N0 1113 aa12.37□□□□□ -0.43
TMEM248-202ENST00000413593 TTC39AQ5SRH9 613 aa12.37□□□□□ -0.43
TMEM248-202ENST00000413593 APOBEC3HQ6NTF7 200 aaKnown RBP12.37□□□□□ -0.43
TMEM248-202ENST00000413593 AACSQ86V21 672 aa12.37□□□□□ -0.43
TMEM248-202ENST00000413593 KIF1BPQ96EK5 621 aa12.37□□□□□ -0.43
TMEM248-202ENST00000413593 HHIPL1Q96JK4 782 aa12.37□□□□□ -0.43
TMEM248-202ENST00000413593 ZNF512BQ96KM6 892 aaPredicted RBP12.37□□□□□ -0.43
TMEM248-202ENST00000413593 IL1RAPL2Q9NP60 686 aa12.37□□□□□ -0.43
TMEM248-202ENST00000413593 ABCF2Q9UG63 623 aa12.37□□□□□ -0.43
TMEM248-202ENST00000413593 PPP2R3BQ9Y5P8 575 aa12.37□□□□□ -0.43
TMEM248-202ENST00000413593 RAB11FIP3O75154 756 aa12.36□□□□□ -0.43
TMEM248-202ENST00000413593 FKBP1BP68106 108 aa12.36□□□□□ -0.43
TMEM248-202ENST00000413593 TNFAIP1Q13829 316 aa12.36□□□□□ -0.43
TMEM248-202ENST00000413593 SPTY2D1Q68D10 685 aaPredicted RBP12.36□□□□□ -0.43
TMEM248-202ENST00000413593 CYP4F22Q6NT55 531 aa12.36□□□□□ -0.43
TMEM248-202ENST00000413593 PAXIP1Q6ZW49 1069 aaPredicted RBP12.36□□□□□ -0.43
TMEM248-202ENST00000413593 CAPNS2Q96L46 248 aa12.36□□□□□ -0.43
TMEM248-202ENST00000413593 CRBNQ96SW2 442 aa12.36□□□□□ -0.43
TMEM248-202ENST00000413593 DAGLAQ9Y4D2 1042 aa12.36□□□□□ -0.43
TMEM248-202ENST00000413593 WDR33Q9C0J8 1336 aaKnown RBP12.36□□□□□ -0.43
TMEM248-202ENST00000413593 NF2P35240 595 aa12.35□□□□□ -0.43
TMEM248-202ENST00000413593 ECE1P42892 770 aa12.35□□□□□ -0.43
TMEM248-202ENST00000413593 RASA3Q14644 834 aa12.35□□□□□ -0.43
TMEM248-202ENST00000413593 TBC1D9Q6ZT07 1266 aa12.35□□□□□ -0.43
TMEM248-202ENST00000413593 ERICH6Q7L0X2 663 aa12.35□□□□□ -0.43
TMEM248-202ENST00000413593 DZIP1Q86YF9 867 aaKnown RBP12.35□□□□□ -0.43
TMEM248-202ENST00000413593 CLASRPQ8N2M8 674 aaKnown RBP12.35□□□□□ -0.43
TMEM248-202ENST00000413593 SNRKQ9NRH2 765 aa12.35□□□□□ -0.43
TMEM248-202ENST00000413593 PCDHB15Q9Y5E8 787 aa12.35□□□□□ -0.43
TMEM248-202ENST00000413593 GAKO14976 1311 aa12.35□□□□□ -0.43
TMEM248-202ENST00000413593 TRPM7Q96QT4 1865 aa12.34□□□□□ -0.43
TMEM248-202ENST00000413593 TCP10L2B9ZVM9 353 aa12.34□□□□□ -0.43
TMEM248-202ENST00000413593 ABCB7O75027 752 aa12.34□□□□□ -0.43
TMEM248-202ENST00000413593 CACNB3P54284 484 aa12.34□□□□□ -0.43
TMEM248-202ENST00000413593 RGMBQ6NW40 437 aa12.34□□□□□ -0.43
TMEM248-202ENST00000413593 MOB2Q70IA6 237 aa12.34□□□□□ -0.43
TMEM248-202ENST00000413593 TMOD2Q9NZR1 351 aa12.34□□□□□ -0.43
TMEM248-202ENST00000413593 SSC5DA1L4H1 1573 aa12.34□□□□□ -0.43
TMEM248-202ENST00000413593 CYP2E1P05181 493 aaPredicted RBP12.33□□□□□ -0.44
TMEM248-202ENST00000413593 ZAP70P43403 619 aa12.33□□□□□ -0.44
TMEM248-202ENST00000413593 TNNI2P48788 182 aa12.33□□□□□ -0.44
TMEM248-202ENST00000413593 MECOMQ03112 1051 aa12.33□□□□□ -0.44
TMEM248-202ENST00000413593 GRM1Q13255 1194 aa12.33□□□□□ -0.44
TMEM248-202ENST00000413593 SUPT20HL1Q3ZLR7 823 aa12.33□□□□□ -0.44
TMEM248-202ENST00000413593 NBPF12Q5TAG4 269 aaPredicted RBP12.33□□□□□ -0.44
TMEM248-202ENST00000413593 FKBP1CQ5VVH2 108 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms