RNA–Protein interactions for RNA: ENST00000413437.1

CSTF2-202, Transcript of cleavage stimulation factor subunit 2, humanhuman

TSL 5

Gene CSTF2, Length 757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-202ENST00000413437 LRRCC1Q9C099 1032 aa9.48□□□□□ -0.89
CSTF2-202ENST00000413437 ANTXR1Q9H6X2 564 aa9.48□□□□□ -0.89
CSTF2-202ENST00000413437 PIH1D3Q9NQM4 214 aaKnown RBP9.48□□□□□ -0.89
CSTF2-202ENST00000413437 GNL3LQ9NVN8 582 aaKnown RBP9.48□□□□□ -0.89
CSTF2-202ENST00000413437 GGA3Q9NZ52 723 aa9.48□□□□□ -0.89
CSTF2-202ENST00000413437 MYO5AQ9Y4I1 1855 aaKnown RBP9.48□□□□□ -0.89
CSTF2-202ENST00000413437 PASKQ96RG2 1323 aa9.48□□□□□ -0.89
CSTF2-202ENST00000413437 CYP2E1P05181 493 aaPredicted RBP9.47□□□□□ -0.89
CSTF2-202ENST00000413437 CRKP46108 304 aa9.47□□□□□ -0.89
CSTF2-202ENST00000413437 RBM5P52756 815 aaKnown RBP eCLIP9.47□□□□□ -0.89
CSTF2-202ENST00000413437 CACNB3P54284 484 aa9.47□□□□□ -0.89
CSTF2-202ENST00000413437 HDAC1Q13547 482 aaPredicted RBP9.47□□□□□ -0.89
CSTF2-202ENST00000413437 DLGAP5Q15398 846 aa9.47□□□□□ -0.89
CSTF2-202ENST00000413437 CCDC158Q5M9N0 1113 aa9.47□□□□□ -0.89
CSTF2-202ENST00000413437 B4GALNT3Q6L9W6 998 aa9.47□□□□□ -0.89
CSTF2-202ENST00000413437 CLASRPQ8N2M8 674 aaKnown RBP9.47□□□□□ -0.89
CSTF2-202ENST00000413437 OGFOD1Q8N543 542 aa9.47□□□□□ -0.89
CSTF2-202ENST00000413437 WDR66Q8TBY9 1149 aa9.47□□□□□ -0.89
CSTF2-202ENST00000413437 TDRD3Q9H7E2 651 aaKnown RBP9.47□□□□□ -0.89
CSTF2-202ENST00000413437 ABCF2Q9UG63 623 aa9.47□□□□□ -0.89
CSTF2-202ENST00000413437 SPDYE2BA6NHP3 402 aa9.46□□□□□ -0.9
CSTF2-202ENST00000413437 SEMA3EO15041 775 aa9.46□□□□□ -0.9
CSTF2-202ENST00000413437 LDHBP07195 334 aaKnown RBP9.46□□□□□ -0.9
CSTF2-202ENST00000413437 IFIT2P09913 472 aaKnown RBP9.46□□□□□ -0.9
CSTF2-202ENST00000413437 UQCRFS1P1P0C7P4 283 aa9.46□□□□□ -0.9
CSTF2-202ENST00000413437 SPDYE6P0CI01 402 aa9.46□□□□□ -0.9
CSTF2-202ENST00000413437 SLFNL1Q499Z3 407 aa9.46□□□□□ -0.9
CSTF2-202ENST00000413437 ANKRD45Q5TZF3 282 aa9.46□□□□□ -0.9
CSTF2-202ENST00000413437 CST9Q5W186 159 aa9.46□□□□□ -0.9
CSTF2-202ENST00000413437 APOBEC3HQ6NTF7 200 aaKnown RBP9.46□□□□□ -0.9
CSTF2-202ENST00000413437 MTMR14Q8NCE2 650 aa9.46□□□□□ -0.9
CSTF2-202ENST00000413437 TBC1D22AQ8WUA7 517 aa9.46□□□□□ -0.9
CSTF2-202ENST00000413437 HDAC9Q9UKV0 1011 aa9.46□□□□□ -0.9
CSTF2-202ENST00000413437 SALL1Q9NSC2 1324 aa9.46□□□□□ -0.9
CSTF2-202ENST00000413437 ZBTB22O15209 634 aa9.45□□□□□ -0.9
CSTF2-202ENST00000413437 CHGBP05060 677 aa9.45□□□□□ -0.9
CSTF2-202ENST00000413437 HSPA6P17066 643 aa9.45□□□□□ -0.9
CSTF2-202ENST00000413437 MECOMQ03112 1051 aa9.45□□□□□ -0.9
CSTF2-202ENST00000413437 KRT26Q7Z3Y9 468 aa9.45□□□□□ -0.9
CSTF2-202ENST00000413437 CDAN1Q8IWY9 1227 aa9.45□□□□□ -0.9
CSTF2-202ENST00000413437 ZC3H15Q8WU90 426 aaKnown RBP9.45□□□□□ -0.9
CSTF2-202ENST00000413437 DCPSQ96C86 337 aaKnown RBP9.45□□□□□ -0.9
CSTF2-202ENST00000413437 ZNF512BQ96KM6 892 aaPredicted RBP9.45□□□□□ -0.9
CSTF2-202ENST00000413437 BOLA2Q9H3K6 86 aa9.45□□□□□ -0.9
CSTF2-202ENST00000413437 ZNF408Q9H9D4 720 aa9.45□□□□□ -0.9
CSTF2-202ENST00000413437 ZNF70Q9UC06 446 aaPredicted RBP9.45□□□□□ -0.9
CSTF2-202ENST00000413437 SERPINA10Q9UK55 444 aa9.45□□□□□ -0.9
CSTF2-202ENST00000413437 FZD1Q9UP38 647 aa9.45□□□□□ -0.9
CSTF2-202ENST00000413437 DAGLAQ9Y4D2 1042 aa9.45□□□□□ -0.9
CSTF2-202ENST00000413437 TCP10L2B9ZVM9 353 aa9.44□□□□□ -0.9
CSTF2-202ENST00000413437 MAP4K4O95819 1239 aaPredicted RBP9.44□□□□□ -0.9
CSTF2-202ENST00000413437 APLP1P51693 650 aa9.44□□□□□ -0.9
CSTF2-202ENST00000413437 MOB2Q70IA6 237 aa9.44□□□□□ -0.9
CSTF2-202ENST00000413437 ERICH6Q7L0X2 663 aa9.44□□□□□ -0.9
CSTF2-202ENST00000413437 CDC37L1Q7L3B6 337 aa9.44□□□□□ -0.9
CSTF2-202ENST00000413437 ADGRA1Q86SQ6 560 aa9.44□□□□□ -0.9
CSTF2-202ENST00000413437 SMC5Q8IY18 1101 aa9.44□□□□□ -0.9
CSTF2-202ENST00000413437 TEKT1Q969V4 418 aa9.44□□□□□ -0.9
CSTF2-202ENST00000413437 NSUN4Q96CB9 384 aaKnown RBP9.44□□□□□ -0.9
CSTF2-202ENST00000413437 RWDD1Q9H446 243 aaPredicted RBP9.44□□□□□ -0.9
CSTF2-202ENST00000413437 VEZTQ9HBM0 779 aa9.44□□□□□ -0.9
CSTF2-202ENST00000413437 RAI14Q9P0K7 980 aa9.44□□□□□ -0.9
CSTF2-202ENST00000413437 PDS5AQ29RF7 1337 aaKnown RBP9.44□□□□□ -0.9
CSTF2-202ENST00000413437 MYH2Q9UKX2 1941 aa9.43□□□□□ -0.9
CSTF2-202ENST00000413437 CNTNAP1P78357 1384 aa9.43□□□□□ -0.9
CSTF2-202ENST00000413437 SALL3Q9BXA9 1300 aa9.43□□□□□ -0.9
CSTF2-202ENST00000413437 GOLIM4O00461 696 aa9.43□□□□□ -0.9
CSTF2-202ENST00000413437 CELF2O95319 508 aaKnown RBP9.43□□□□□ -0.9
CSTF2-202ENST00000413437 SLURP2P0DP57 97 aa9.43□□□□□ -0.9
CSTF2-202ENST00000413437 ATP5JP18859 108 aa9.43□□□□□ -0.9
CSTF2-202ENST00000413437 HDLBPQ00341 1268 aaKnown RBP9.43□□□□□ -0.9
CSTF2-202ENST00000413437 AAMPQ13685 434 aa9.43□□□□□ -0.9
CSTF2-202ENST00000413437 SPDYE2Q495Y8 402 aa9.43□□□□□ -0.9
CSTF2-202ENST00000413437 CDC42EP5Q6NZY7 148 aa9.43□□□□□ -0.9
CSTF2-202ENST00000413437 HHIPL2Q6UWX4 724 aa9.43□□□□□ -0.9
CSTF2-202ENST00000413437 ZFPM1Q8IX07 1006 aa9.43□□□□□ -0.9
CSTF2-202ENST00000413437 CDCA5Q96FF9 252 aa9.43□□□□□ -0.9
CSTF2-202ENST00000413437 ZDHHC15Q96MV8 337 aa9.43□□□□□ -0.9
CSTF2-202ENST00000413437 DNAJC2Q99543 621 aaKnown RBP9.43□□□□□ -0.9
CSTF2-202ENST00000413437 MRIQ9BWK5 157 aa9.43□□□□□ -0.9
CSTF2-202ENST00000413437 LNPKQ9C0E8 428 aa9.43□□□□□ -0.9
CSTF2-202ENST00000413437 LRP2BPQ9P2M1 347 aa9.43□□□□□ -0.9
CSTF2-202ENST00000413437 SUGT1Q9Y2Z0 365 aa9.43□□□□□ -0.9
CSTF2-202ENST00000413437 ECM29Q5VYK3 1845 aa9.42□□□□□ -0.9
CSTF2-202ENST00000413437 PDE4AP27815 886 aa9.42□□□□□ -0.9
CSTF2-202ENST00000413437 DYNLL1P63167 89 aaKnown RBP9.42□□□□□ -0.9
CSTF2-202ENST00000413437 NFIAQ12857 509 aa9.42□□□□□ -0.9
CSTF2-202ENST00000413437 PRKG1Q13976 671 aa9.42□□□□□ -0.9
CSTF2-202ENST00000413437 SKAP1Q86WV1 359 aa9.42□□□□□ -0.9
CSTF2-202ENST00000413437 DZIP1Q86YF9 867 aaKnown RBP9.42□□□□□ -0.9
CSTF2-202ENST00000413437 SULF1Q8IWU6 871 aa9.42□□□□□ -0.9
CSTF2-202ENST00000413437 PI4K2BQ8TCG2 481 aa9.42□□□□□ -0.9
CSTF2-202ENST00000413437 GCC1Q96CN9 775 aa9.42□□□□□ -0.9
CSTF2-202ENST00000413437 USP40Q9NVE5 1235 aa9.42□□□□□ -0.9
CSTF2-202ENST00000413437 MROH7-TTC4A0A0A0MT08 1334 aa9.41□□□□□ -0.9
CSTF2-202ENST00000413437 GAKO14976 1311 aa9.41□□□□□ -0.9
CSTF2-202ENST00000413437 PITPNM2Q9BZ72 1349 aa9.41□□□□□ -0.9
CSTF2-202ENST00000413437 TMEM88BA6NKF7 163 aa9.41□□□□□ -0.9
CSTF2-202ENST00000413437 IDH1O75874 414 aaKnown RBP9.41□□□□□ -0.9
CSTF2-202ENST00000413437 BTDP43251 543 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms