RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 SERPINA10Q9UK55 444 aa12.63□□□□□ -0.39
NCKIPSD-202ENST00000413374 ZBTB7BO15156 539 aaPredicted RBP12.62□□□□□ -0.39
NCKIPSD-202ENST00000413374 CACNB3P54284 484 aa12.62□□□□□ -0.39
NCKIPSD-202ENST00000413374 NOGQ13253 232 aa12.62□□□□□ -0.39
NCKIPSD-202ENST00000413374 MTX1Q13505 466 aa12.62□□□□□ -0.39
NCKIPSD-202ENST00000413374 RASA3Q14644 834 aa12.62□□□□□ -0.39
NCKIPSD-202ENST00000413374 NBPF12Q5TAG4 269 aaPredicted RBP12.62□□□□□ -0.39
NCKIPSD-202ENST00000413374 ANGEL1Q9UNK9 670 aaKnown RBP12.62□□□□□ -0.39
NCKIPSD-202ENST00000413374 A0A1B0GUL7 405 aa12.61□□□□□ -0.39
NCKIPSD-202ENST00000413374 CAPN15O75808 1086 aa12.61□□□□□ -0.39
NCKIPSD-202ENST00000413374 FKBP1BP68106 108 aa12.61□□□□□ -0.39
NCKIPSD-202ENST00000413374 ATP8B2P98198 1209 aa12.61□□□□□ -0.39
NCKIPSD-202ENST00000413374 CCDC102BQ68D86 513 aa12.61□□□□□ -0.39
NCKIPSD-202ENST00000413374 ARMC9Q7Z3E5 817 aa12.61□□□□□ -0.39
NCKIPSD-202ENST00000413374 XAGE2Q96GT9 111 aa12.61□□□□□ -0.39
NCKIPSD-202ENST00000413374 GNL3LQ9NVN8 582 aaKnown RBP12.61□□□□□ -0.39
NCKIPSD-202ENST00000413374 SURF6O75683 361 aaKnown RBP12.6□□□□□ -0.39
NCKIPSD-202ENST00000413374 SLC10A3P09131 477 aa12.6□□□□□ -0.39
NCKIPSD-202ENST00000413374 OS9Q13438 667 aaPredicted RBP12.6□□□□□ -0.39
NCKIPSD-202ENST00000413374 SPDYE2Q495Y8 402 aa12.6□□□□□ -0.39
NCKIPSD-202ENST00000413374 RASAL3Q86YV0 1011 aa12.6□□□□□ -0.39
NCKIPSD-202ENST00000413374 WDR66Q8TBY9 1149 aa12.6□□□□□ -0.39
NCKIPSD-202ENST00000413374 TEKT1Q969V4 418 aa12.6□□□□□ -0.39
NCKIPSD-202ENST00000413374 CSRNP1Q96S65 589 aa12.6□□□□□ -0.39
NCKIPSD-202ENST00000413374 AKAP2Q9Y2D5 859 aa12.6□□□□□ -0.39
NCKIPSD-202ENST00000413374 PRDX5P30044 214 aa12.59□□□□□ -0.39
NCKIPSD-202ENST00000413374 DIXDC1Q155Q3 683 aa12.59□□□□□ -0.39
NCKIPSD-202ENST00000413374 SUPT20HL1Q3ZLR7 823 aa12.59□□□□□ -0.39
NCKIPSD-202ENST00000413374 GORABQ5T7V8 394 aa12.59□□□□□ -0.39
NCKIPSD-202ENST00000413374 CDAN1Q8IWY9 1227 aa12.59□□□□□ -0.39
NCKIPSD-202ENST00000413374 TMEM39BQ9GZU3 492 aa12.59□□□□□ -0.39
NCKIPSD-202ENST00000413374 PRDM10Q9NQV6 1147 aa12.59□□□□□ -0.39
NCKIPSD-202ENST00000413374 RCAN3Q9UKA8 241 aa12.59□□□□□ -0.39
NCKIPSD-202ENST00000413374 DENND2AQ9ULE3 1009 aa12.59□□□□□ -0.39
NCKIPSD-202ENST00000413374 POLR2AP24928 1970 aaKnown RBP12.58□□□□□ -0.4
NCKIPSD-202ENST00000413374 USP2O75604 605 aaPredicted RBP12.58□□□□□ -0.4
NCKIPSD-202ENST00000413374 TRPA1O75762 1119 aa12.58□□□□□ -0.4
NCKIPSD-202ENST00000413374 LDHBP07195 334 aaKnown RBP12.58□□□□□ -0.4
NCKIPSD-202ENST00000413374 POLA2Q14181 598 aa12.58□□□□□ -0.4
NCKIPSD-202ENST00000413374 APOBEC3HQ6NTF7 200 aaKnown RBP12.58□□□□□ -0.4
NCKIPSD-202ENST00000413374 SLC10A4Q96EP9 437 aa12.58□□□□□ -0.4
NCKIPSD-202ENST00000413374 CLMNQ96JQ2 1002 aa12.58□□□□□ -0.4
NCKIPSD-202ENST00000413374 TRPM7Q96QT4 1865 aa12.58□□□□□ -0.4
NCKIPSD-202ENST00000413374 ABCF2Q9UG63 623 aa12.58□□□□□ -0.4
NCKIPSD-202ENST00000413374 COG6Q9Y2V7 657 aa12.58□□□□□ -0.4
NCKIPSD-202ENST00000413374 PPP2R3BQ9Y5P8 575 aa12.58□□□□□ -0.4
NCKIPSD-202ENST00000413374 PSME4Q14997 1843 aa12.58□□□□□ -0.4
NCKIPSD-202ENST00000413374 PPP1R12BO60237 982 aaPredicted RBP12.57□□□□□ -0.4
NCKIPSD-202ENST00000413374 TNNI2P48788 182 aa12.57□□□□□ -0.4
NCKIPSD-202ENST00000413374 HDLBPQ00341 1268 aaKnown RBP12.57□□□□□ -0.4
NCKIPSD-202ENST00000413374 RASGRF1Q13972 1273 aa12.57□□□□□ -0.4
NCKIPSD-202ENST00000413374 MVPQ14764 893 aaKnown RBP12.57□□□□□ -0.4
NCKIPSD-202ENST00000413374 LDLRAD1Q5T700 205 aa12.57□□□□□ -0.4
NCKIPSD-202ENST00000413374 SSH3Q8TE77 659 aa12.57□□□□□ -0.4
NCKIPSD-202ENST00000413374 ZDHHC15Q96MV8 337 aa12.57□□□□□ -0.4
NCKIPSD-202ENST00000413374 MRIQ9BWK5 157 aa12.57□□□□□ -0.4
NCKIPSD-202ENST00000413374 BCL11AQ9H165 835 aa12.57□□□□□ -0.4
NCKIPSD-202ENST00000413374 RNF186Q9NXI6 227 aa12.57□□□□□ -0.4
NCKIPSD-202ENST00000413374 SUGT1Q9Y2Z0 365 aa12.57□□□□□ -0.4
NCKIPSD-202ENST00000413374 A0A1B0GUL6 1792 aa12.56□□□□□ -0.4
NCKIPSD-202ENST00000413374 ZNF646O15015 1829 aaPredicted RBP12.56□□□□□ -0.4
NCKIPSD-202ENST00000413374 TNFAIP1Q13829 316 aa12.56□□□□□ -0.4
NCKIPSD-202ENST00000413374 HHIPL2Q6UWX4 724 aa12.56□□□□□ -0.4
NCKIPSD-202ENST00000413374 PI16Q6UXB8 463 aa12.56□□□□□ -0.4
NCKIPSD-202ENST00000413374 TBC1D9Q6ZT07 1266 aa12.56□□□□□ -0.4
NCKIPSD-202ENST00000413374 YTHDC1Q96MU7 727 aaKnown RBP12.56□□□□□ -0.4
NCKIPSD-202ENST00000413374 USP40Q9NVE5 1235 aa12.56□□□□□ -0.4
NCKIPSD-202ENST00000413374 TMOD2Q9NZR1 351 aa12.56□□□□□ -0.4
NCKIPSD-202ENST00000413374 DAGLAQ9Y4D2 1042 aa12.56□□□□□ -0.4
NCKIPSD-202ENST00000413374 COL1A1P02452 1464 aaPredicted RBP12.56□□□□□ -0.4
NCKIPSD-202ENST00000413374 MAST3O60307 1309 aa12.56□□□□□ -0.4
NCKIPSD-202ENST00000413374 SEMA3EO15041 775 aa12.55□□□□□ -0.4
NCKIPSD-202ENST00000413374 MS4A1P11836 297 aa12.55□□□□□ -0.4
NCKIPSD-202ENST00000413374 TCP10Q12799 353 aa12.55□□□□□ -0.4
NCKIPSD-202ENST00000413374 C20orf194Q5TEA3 1177 aa12.55□□□□□ -0.4
NCKIPSD-202ENST00000413374 CDC42EP5Q6NZY7 148 aa12.55□□□□□ -0.4
NCKIPSD-202ENST00000413374 CEP85Q6P2H3 762 aa12.55□□□□□ -0.4
NCKIPSD-202ENST00000413374 TEPSINQ96N21 525 aa12.55□□□□□ -0.4
NCKIPSD-202ENST00000413374 CCDC8Q9H0W5 538 aaPredicted RBP12.55□□□□□ -0.4
NCKIPSD-202ENST00000413374 SNRKQ9NRH2 765 aa12.55□□□□□ -0.4
NCKIPSD-202ENST00000413374 HMG20BQ9P0W2 317 aa12.55□□□□□ -0.4
NCKIPSD-202ENST00000413374 APBB1O00213 710 aa12.54□□□□□ -0.4
NCKIPSD-202ENST00000413374 CA12O43570 354 aa12.54□□□□□ -0.4
NCKIPSD-202ENST00000413374 TBC1D8O95759 1140 aa12.54□□□□□ -0.4
NCKIPSD-202ENST00000413374 IREB2P48200 963 aaKnown RBP12.54□□□□□ -0.4
NCKIPSD-202ENST00000413374 TNNI3KQ59H18 835 aa12.54□□□□□ -0.4
NCKIPSD-202ENST00000413374 DZIP1Q86YF9 867 aaKnown RBP12.54□□□□□ -0.4
NCKIPSD-202ENST00000413374 SPATA5Q8NB90 893 aa12.54□□□□□ -0.4
NCKIPSD-202ENST00000413374 DBNDD2Q9BQY9 259 aa12.54□□□□□ -0.4
NCKIPSD-202ENST00000413374 ELP3Q9H9T3 547 aa12.54□□□□□ -0.4
NCKIPSD-202ENST00000413374 EXOC6BQ9Y2D4 811 aa12.54□□□□□ -0.4
NCKIPSD-202ENST00000413374 FPGT-TNNI3KV9GXZ4 949 aa12.54□□□□□ -0.4
NCKIPSD-202ENST00000413374 SSC5DA1L4H1 1573 aa12.53□□□□□ -0.4
NCKIPSD-202ENST00000413374 NFIAQ12857 509 aa12.53□□□□□ -0.4
NCKIPSD-202ENST00000413374 MAP3K11Q16584 847 aa12.53□□□□□ -0.4
NCKIPSD-202ENST00000413374 TTC39AQ5SRH9 613 aa12.53□□□□□ -0.4
NCKIPSD-202ENST00000413374 SPRYD7Q5W111 196 aa12.53□□□□□ -0.4
NCKIPSD-202ENST00000413374 ERICH6Q7L0X2 663 aa12.53□□□□□ -0.4
NCKIPSD-202ENST00000413374 MIGA2Q7L4E1 593 aa12.53□□□□□ -0.4
NCKIPSD-202ENST00000413374 ZFPM1Q8IX07 1006 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms