RNA–Protein interactions for RNA: ENST00000412899.5

ITGA6-204, Transcript of integrin subunit alpha 6, humanhuman

TSL 1 (best)

Gene ITGA6, Length 970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-204ENST00000412899 RABL6Q3YEC7 729 aaPredicted RBP23.44■■□□□ 1.34
ITGA6-204ENST00000412899 LRRC24Q50LG9 513 aa23.44■■□□□ 1.34
ITGA6-204ENST00000412899 FBXO33Q7Z6M2 555 aa23.44■■□□□ 1.34
ITGA6-204ENST00000412899 MRPL50Q8N5N7 158 aaKnown RBP23.44■■□□□ 1.34
ITGA6-204ENST00000412899 ELP3Q9H9T3 547 aa23.44■■□□□ 1.34
ITGA6-204ENST00000412899 GJA5P36382 358 aa23.43■■□□□ 1.34
ITGA6-204ENST00000412899 PTPRCP08575 1304 aa23.42■■□□□ 1.34
ITGA6-204ENST00000412899 ANKRD44Q8N8A2 993 aa23.42■■□□□ 1.34
ITGA6-204ENST00000412899 TBC1D22AQ8WUA7 517 aa23.42■■□□□ 1.34
ITGA6-204ENST00000412899 OPTNQ96CV9 577 aa23.42■■□□□ 1.34
ITGA6-204ENST00000412899 E9PSI1 815 aa23.41■■□□□ 1.34
ITGA6-204ENST00000412899 PDE8BO95263 885 aa23.41■■□□□ 1.34
ITGA6-204ENST00000412899 CRHR2Q13324 411 aa23.41■■□□□ 1.34
ITGA6-204ENST00000412899 GRIK5Q16478 980 aa23.41■■□□□ 1.34
ITGA6-204ENST00000412899 OTOP1Q7RTM1 612 aa23.41■■□□□ 1.34
ITGA6-204ENST00000412899 ERO1AQ96HE7 468 aa23.41■■□□□ 1.34
ITGA6-204ENST00000412899 TEPSINQ96N21 525 aa23.41■■□□□ 1.34
ITGA6-204ENST00000412899 TMEM39BQ9GZU3 492 aa23.41■■□□□ 1.34
ITGA6-204ENST00000412899 ARAP2Q8WZ64 1704 aa23.4■■□□□ 1.34
ITGA6-204ENST00000412899 HDLBPQ00341 1268 aaKnown RBP23.4■■□□□ 1.34
ITGA6-204ENST00000412899 CDAN1Q8IWY9 1227 aa23.4■■□□□ 1.34
ITGA6-204ENST00000412899 PTPN18Q99952 460 aa23.4■■□□□ 1.34
ITGA6-204ENST00000412899 TESPA1A2RU30 521 aaPredicted RBP23.39■■□□□ 1.33
ITGA6-204ENST00000412899 MAP3K9P80192 1104 aa23.39■■□□□ 1.33
ITGA6-204ENST00000412899 PRPF38BQ5VTL8 546 aaKnown RBP23.39■■□□□ 1.33
ITGA6-204ENST00000412899 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.39■■□□□ 1.33
ITGA6-204ENST00000412899 KLHDC4Q8TBB5 520 aa23.39■■□□□ 1.33
ITGA6-204ENST00000412899 TEKT1Q969V4 418 aa23.39■■□□□ 1.33
ITGA6-204ENST00000412899 LAMB1P07942 1786 aa23.39■■□□□ 1.33
ITGA6-204ENST00000412899 BCAMP50895 628 aa23.38■■□□□ 1.33
ITGA6-204ENST00000412899 VGLL2Q8N8G2 317 aa23.38■■□□□ 1.33
ITGA6-204ENST00000412899 CD99L2Q8TCZ2 262 aa23.38■■□□□ 1.33
ITGA6-204ENST00000412899 CSADQ9Y600 493 aa23.38■■□□□ 1.33
ITGA6-204ENST00000412899 IFIT1P09914 478 aaKnown RBP23.37■■□□□ 1.33
ITGA6-204ENST00000412899 SP3Q02447 781 aa23.37■■□□□ 1.33
ITGA6-204ENST00000412899 SLFN5Q08AF3 891 aa23.37■■□□□ 1.33
ITGA6-204ENST00000412899 VGLL4Q14135 290 aa23.37■■□□□ 1.33
ITGA6-204ENST00000412899 SSH1Q8WYL5 1049 aa23.37■■□□□ 1.33
ITGA6-204ENST00000412899 MS4A4AQ96JQ5 239 aa23.37■■□□□ 1.33
ITGA6-204ENST00000412899 USP44Q9H0E7 712 aa23.37■■□□□ 1.33
ITGA6-204ENST00000412899 TMOD2Q9NZR1 351 aa23.37■■□□□ 1.33
ITGA6-204ENST00000412899 OTOFQ9HC10 1997 aa23.36■■□□□ 1.33
ITGA6-204ENST00000412899 TNRC18O15417 2968 aaPredicted RBP23.36■■□□□ 1.33
ITGA6-204ENST00000412899 PDE4DIPQ5VU43 2346 aa23.36■■□□□ 1.33
ITGA6-204ENST00000412899 CACNB3P54284 484 aa23.36■■□□□ 1.33
ITGA6-204ENST00000412899 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.36■■□□□ 1.33
ITGA6-204ENST00000412899 CNKSR2Q8WXI2 1034 aa23.36■■□□□ 1.33
ITGA6-204ENST00000412899 CDCA7LQ96GN5 454 aa23.36■■□□□ 1.33
ITGA6-204ENST00000412899 EFCC1Q9HA90 598 aa23.36■■□□□ 1.33
ITGA6-204ENST00000412899 PTPN22Q9Y2R2 807 aa23.36■■□□□ 1.33
ITGA6-204ENST00000412899 CCL15-CCL14A0A0B4J2E2 113 aa23.35■■□□□ 1.33
ITGA6-204ENST00000412899 GTF2A2P52657 109 aa23.35■■□□□ 1.33
ITGA6-204ENST00000412899 PUM3Q15397 648 aaKnown RBP23.35■■□□□ 1.33
ITGA6-204ENST00000412899 CCL15Q16663 113 aa23.35■■□□□ 1.33
ITGA6-204ENST00000412899 INTS3Q68E01 1043 aaKnown RBP23.35■■□□□ 1.33
ITGA6-204ENST00000412899 OTUD5Q96G74 571 aa23.35■■□□□ 1.33
ITGA6-204ENST00000412899 MAST3O60307 1309 aa23.34■■□□□ 1.33
ITGA6-204ENST00000412899 BRI3BPQ8WY22 251 aa23.34■■□□□ 1.33
ITGA6-204ENST00000412899 ZDHHC15Q96MV8 337 aa23.34■■□□□ 1.33
ITGA6-204ENST00000412899 MRIQ9BWK5 157 aa23.34■■□□□ 1.33
ITGA6-204ENST00000412899 SUGT1Q9Y2Z0 365 aa23.34■■□□□ 1.33
ITGA6-204ENST00000412899 TAF1CQ15572 869 aaPredicted RBP23.33■■□□□ 1.33
ITGA6-204ENST00000412899 ZFYVE28Q9HCC9 887 aa23.33■■□□□ 1.33
ITGA6-204ENST00000412899 KIF16BQ96L93 1317 aa23.33■■□□□ 1.32
ITGA6-204ENST00000412899 EYA2O00167 538 aa23.32■■□□□ 1.32
ITGA6-204ENST00000412899 SLC5A1P13866 664 aa23.32■■□□□ 1.32
ITGA6-204ENST00000412899 FGFR2P21802 821 aa23.32■■□□□ 1.32
ITGA6-204ENST00000412899 FAM83AQ86UY5 434 aa23.32■■□□□ 1.32
ITGA6-204ENST00000412899 HOOK2Q96ED9 719 aa23.32■■□□□ 1.32
ITGA6-204ENST00000412899 ARHGEF6Q15052 776 aa23.31■■□□□ 1.32
ITGA6-204ENST00000412899 APOBEC3HQ6NTF7 200 aaKnown RBP23.31■■□□□ 1.32
ITGA6-204ENST00000412899 HHIPL2Q6UWX4 724 aa23.31■■□□□ 1.32
ITGA6-204ENST00000412899 LPIN2Q92539 896 aa23.31■■□□□ 1.32
ITGA6-204ENST00000412899 WRNIP1Q96S55 665 aa23.31■■□□□ 1.32
ITGA6-204ENST00000412899 POTEFA5A3E0 1075 aa23.3■■□□□ 1.32
ITGA6-204ENST00000412899 SPDYE5A6NIY4 337 aa23.3■■□□□ 1.32
ITGA6-204ENST00000412899 WDHD1O75717 1129 aaPredicted RBP23.3■■□□□ 1.32
ITGA6-204ENST00000412899 RFX5P48382 616 aaPredicted RBP23.3■■□□□ 1.32
ITGA6-204ENST00000412899 ALDH1L2Q3SY69 923 aa23.3■■□□□ 1.32
ITGA6-204ENST00000412899 FKBP1CQ5VVH2 108 aa23.3■■□□□ 1.32
ITGA6-204ENST00000412899 FAM43AQ8N2R8 423 aa23.3■■□□□ 1.32
ITGA6-204ENST00000412899 WDR66Q8TBY9 1149 aa23.3■■□□□ 1.32
ITGA6-204ENST00000412899 ERO1BQ86YB8 467 aa23.29■■□□□ 1.32
ITGA6-204ENST00000412899 TRMT2AQ8IZ69 625 aaKnown RBP23.29■■□□□ 1.32
ITGA6-204ENST00000412899 SMC4Q9NTJ3 1288 aa23.29■■□□□ 1.32
ITGA6-204ENST00000412899 SNCAIPQ9Y6H5 919 aa23.29■■□□□ 1.32
ITGA6-204ENST00000412899 CETPP11597 493 aa23.28■■□□□ 1.32
ITGA6-204ENST00000412899 DCAF15Q66K64 600 aa23.28■■□□□ 1.32
ITGA6-204ENST00000412899 ZKSCAN4Q969J2 545 aaPredicted RBP23.28■■□□□ 1.32
ITGA6-204ENST00000412899 HNRNPUQ00839 825 aaKnown RBP eCLIP23.27■■□□□ 1.32
ITGA6-204ENST00000412899 CAP1Q01518 475 aa23.27■■□□□ 1.32
ITGA6-204ENST00000412899 ARMC5Q96C12 935 aa23.27■■□□□ 1.32
ITGA6-204ENST00000412899 UBTFL1P0CB47 393 aaPredicted RBP23.26■■□□□ 1.31
ITGA6-204ENST00000412899 SNAPC2Q13487 334 aa23.26■■□□□ 1.31
ITGA6-204ENST00000412899 MIGA2Q7L4E1 593 aa23.26■■□□□ 1.31
ITGA6-204ENST00000412899 ATG9AQ7Z3C6 839 aa23.26■■□□□ 1.31
ITGA6-204ENST00000412899 ZNF341Q9BYN7 854 aa23.26■■□□□ 1.31
ITGA6-204ENST00000412899 SIL1Q9H173 461 aa23.26■■□□□ 1.31
ITGA6-204ENST00000412899 IRF6O14896 467 aa23.25■■□□□ 1.31
ITGA6-204ENST00000412899 CEP126Q9P2H0 1117 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 298.7 ms