RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 LILRB5O75023 590 aa6.56□□□□□ -1.36
BRCA1-204ENST00000412061 ESRRAP11474 423 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-204ENST00000412061 EPHA1P21709 976 aa6.56□□□□□ -1.36
BRCA1-204ENST00000412061 ZNF157P51786 506 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-204ENST00000412061 RPS26P62854 115 aaKnown RBP6.56□□□□□ -1.36
BRCA1-204ENST00000412061 IKBKEQ14164 716 aa6.56□□□□□ -1.36
BRCA1-204ENST00000412061 GRIK5Q16478 980 aa6.56□□□□□ -1.36
BRCA1-204ENST00000412061 ZNF423Q2M1K9 1284 aa6.56□□□□□ -1.36
BRCA1-204ENST00000412061 TTBK2Q6IQ55 1244 aa6.56□□□□□ -1.36
BRCA1-204ENST00000412061 C1orf229Q6ZS94 237 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-204ENST00000412061 CHSY3Q70JA7 882 aa6.56□□□□□ -1.36
BRCA1-204ENST00000412061 DPH6Q7L8W6 267 aa6.56□□□□□ -1.36
BRCA1-204ENST00000412061 KIAA0825Q8IV33 1275 aa6.56□□□□□ -1.36
BRCA1-204ENST00000412061 PHC3Q8NDX5 983 aa6.56□□□□□ -1.36
BRCA1-204ENST00000412061 SPON2Q9BUD6 331 aa6.56□□□□□ -1.36
BRCA1-204ENST00000412061 CWC22Q9HCG8 908 aaKnown RBP6.56□□□□□ -1.36
BRCA1-204ENST00000412061 LRRC4BQ9NT99 713 aa6.56□□□□□ -1.36
BRCA1-204ENST00000412061 F6X3S4 739 aa6.55□□□□□ -1.36
BRCA1-204ENST00000412061 M0R082 166 aa6.55□□□□□ -1.36
BRCA1-204ENST00000412061 PAGE1O75459 146 aa6.55□□□□□ -1.36
BRCA1-204ENST00000412061 BCRP11274 1271 aa6.55□□□□□ -1.36
BRCA1-204ENST00000412061 NME2P22392 152 aa6.55□□□□□ -1.36
BRCA1-204ENST00000412061 EIF4A3P38919 411 aaKnown RBP6.55□□□□□ -1.36
BRCA1-204ENST00000412061 PCNX4Q63HM2 1172 aa6.55□□□□□ -1.36
BRCA1-204ENST00000412061 FAM117BQ6P1L5 589 aa6.55□□□□□ -1.36
BRCA1-204ENST00000412061 AGMOQ6ZNB7 445 aa6.55□□□□□ -1.36
BRCA1-204ENST00000412061 IL22RA1Q8N6P7 574 aa6.55□□□□□ -1.36
BRCA1-204ENST00000412061 ZNF417Q8TAU3 575 aa6.55□□□□□ -1.36
BRCA1-204ENST00000412061 RHOVQ96L33 236 aa6.55□□□□□ -1.36
BRCA1-204ENST00000412061 ZNF587Q96SQ5 575 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-204ENST00000412061 PPME1Q9Y570 386 aa6.55□□□□□ -1.36
BRCA1-204ENST00000412061 EIF4EBP3O60516 100 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-204ENST00000412061 IGHA1P01876 353 aa6.54□□□□□ -1.36
BRCA1-204ENST00000412061 LMNB1P20700 586 aa6.54□□□□□ -1.36
BRCA1-204ENST00000412061 GJA8P48165 433 aa6.54□□□□□ -1.36
BRCA1-204ENST00000412061 AFF1P51825 1210 aaKnown RBP6.54□□□□□ -1.36
BRCA1-204ENST00000412061 LMNB2Q03252 620 aa6.54□□□□□ -1.36
BRCA1-204ENST00000412061 PAK2Q13177 524 aa6.54□□□□□ -1.36
BRCA1-204ENST00000412061 VPS37DQ86XT2 251 aa6.54□□□□□ -1.36
BRCA1-204ENST00000412061 WFDC8Q8IUA0 241 aa6.54□□□□□ -1.36
BRCA1-204ENST00000412061 BTBD6Q96KE9 485 aa6.54□□□□□ -1.36
BRCA1-204ENST00000412061 SOX17Q9H6I2 414 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-204ENST00000412061 ADAMTS1Q9UHI8 967 aa6.54□□□□□ -1.36
BRCA1-204ENST00000412061 TLR6Q9Y2C9 796 aa6.54□□□□□ -1.36
BRCA1-204ENST00000412061 SOX1O00570 391 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-204ENST00000412061 PF4P02776 101 aa6.53□□□□□ -1.36
BRCA1-204ENST00000412061 AMPD1P23109 780 aa6.53□□□□□ -1.36
BRCA1-204ENST00000412061 CDC25BP30305 580 aa6.53□□□□□ -1.36
BRCA1-204ENST00000412061 ARL4DP49703 201 aa6.53□□□□□ -1.36
BRCA1-204ENST00000412061 PIP4K2BP78356 416 aa6.53□□□□□ -1.36
BRCA1-204ENST00000412061 SULF2Q8IWU5 870 aa6.53□□□□□ -1.36
BRCA1-204ENST00000412061 WNT8BQ93098 351 aa6.53□□□□□ -1.36
BRCA1-204ENST00000412061 GPRASP2Q96D09 838 aa6.53□□□□□ -1.36
BRCA1-204ENST00000412061 HIRIP3Q9BW71 556 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-204ENST00000412061 EMILIN2Q9BXX0 1053 aa6.53□□□□□ -1.36
BRCA1-204ENST00000412061 TANGO6Q9C0B7 1094 aa6.53□□□□□ -1.36
BRCA1-204ENST00000412061 PRDM6Q9NQX0 595 aa6.53□□□□□ -1.36
BRCA1-204ENST00000412061 CYP8B1Q9UNU6 501 aa6.53□□□□□ -1.36
BRCA1-204ENST00000412061 SUPT16HQ9Y5B9 1047 aaKnown RBP6.53□□□□□ -1.36
BRCA1-204ENST00000412061 SHISA8B8ZZ34 492 aa6.52□□□□□ -1.37
BRCA1-204ENST00000412061 LINC01387J3KSC0 135 aa6.52□□□□□ -1.37
BRCA1-204ENST00000412061 CELA2BP08218 269 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-204ENST00000412061 TFE3P19532 575 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-204ENST00000412061 BMP6P22004 513 aa6.52□□□□□ -1.37
BRCA1-204ENST00000412061 ARNTP27540 789 aa6.52□□□□□ -1.37
BRCA1-204ENST00000412061 DNAJA1P31689 397 aaKnown RBP6.52□□□□□ -1.37
BRCA1-204ENST00000412061 BAG6P46379 1132 aa6.52□□□□□ -1.37
BRCA1-204ENST00000412061 ARID5AQ03989 594 aa6.52□□□□□ -1.37
BRCA1-204ENST00000412061 FAM160A1Q05DH4 1040 aa6.52□□□□□ -1.37
BRCA1-204ENST00000412061 AP3B2Q13367 1082 aa6.52□□□□□ -1.37
BRCA1-204ENST00000412061 CAMK2GQ13555 558 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-204ENST00000412061 LRRC14Q15048 493 aa6.52□□□□□ -1.37
BRCA1-204ENST00000412061 SNAP47Q5SQN1 464 aa6.52□□□□□ -1.37
BRCA1-204ENST00000412061 MSL1Q68DK7 614 aa6.52□□□□□ -1.37
BRCA1-204ENST00000412061 ZNF296Q8WUU4 475 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-204ENST00000412061 SLC7A3Q8WY07 619 aa6.52□□□□□ -1.37
BRCA1-204ENST00000412061 SCARF2Q96GP6 870 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-204ENST00000412061 GMLQ99445 158 aa6.52□□□□□ -1.37
BRCA1-204ENST00000412061 KCNQ5Q9NR82 932 aa6.52□□□□□ -1.37
BRCA1-204ENST00000412061 PRKAG2Q9UGJ0 569 aa6.52□□□□□ -1.37
BRCA1-204ENST00000412061 ITGB2P05107 769 aa6.51□□□□□ -1.37
BRCA1-204ENST00000412061 C19orf57Q0VDD7 668 aa6.51□□□□□ -1.37
BRCA1-204ENST00000412061 DIEXFQ68CQ4 756 aaKnown RBP6.51□□□□□ -1.37
BRCA1-204ENST00000412061 LLGL2Q6P1M3 1020 aa6.51□□□□□ -1.37
BRCA1-204ENST00000412061 FBXL19Q6PCT2 694 aa6.51□□□□□ -1.37
BRCA1-204ENST00000412061 C8orf86Q6ZUL3 223 aa6.51□□□□□ -1.37
BRCA1-204ENST00000412061 TRIM42Q8IWZ5 723 aa6.51□□□□□ -1.37
BRCA1-204ENST00000412061 RASGRP4Q8TDF6 673 aa6.51□□□□□ -1.37
BRCA1-204ENST00000412061 DNAJC2Q99543 621 aaKnown RBP6.51□□□□□ -1.37
BRCA1-204ENST00000412061 NT5C1AQ9BXI3 368 aa6.51□□□□□ -1.37
BRCA1-204ENST00000412061 CBX8Q9HC52 389 aa6.51□□□□□ -1.37
BRCA1-204ENST00000412061 OSGEPQ9NPF4 335 aa6.51□□□□□ -1.37
BRCA1-204ENST00000412061 FSCN2O14926 492 aa6.5□□□□□ -1.37
BRCA1-204ENST00000412061 GREM1O60565 184 aa6.5□□□□□ -1.37
BRCA1-204ENST00000412061 ATP2B1P20020 1258 aa6.5□□□□□ -1.37
BRCA1-204ENST00000412061 GARTP22102 1010 aa6.5□□□□□ -1.37
BRCA1-204ENST00000412061 GSTM4Q03013 218 aa6.5□□□□□ -1.37
BRCA1-204ENST00000412061 TXNDC11Q6PKC3 985 aa6.5□□□□□ -1.37
BRCA1-204ENST00000412061 ZNF662Q6ZS27 426 aa6.5□□□□□ -1.37
BRCA1-204ENST00000412061 CCDC84Q86UT8 332 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms