RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 SERPINA10Q9UK55 444 aa29.23■■■□□ 2.27
UBE2E3-202ENST00000410062 IFIT2P09913 472 aaKnown RBP29.22■■■□□ 2.27
UBE2E3-202ENST00000410062 CRKP46108 304 aa29.22■■■□□ 2.27
UBE2E3-202ENST00000410062 USP48Q86UV5 1035 aa29.22■■■□□ 2.27
UBE2E3-202ENST00000410062 PRMT6Q96LA8 375 aaPredicted RBP29.22■■■□□ 2.27
UBE2E3-202ENST00000410062 ABCF2Q9UG63 623 aa29.22■■■□□ 2.27
UBE2E3-202ENST00000410062 SCAF8Q9UPN6 1271 aaKnown RBP29.22■■■□□ 2.27
UBE2E3-202ENST00000410062 SPDYE2BA6NHP3 402 aa29.22■■■□□ 2.27
UBE2E3-202ENST00000410062 LDHBP07195 334 aaKnown RBP29.22■■■□□ 2.27
UBE2E3-202ENST00000410062 SPDYE6P0CI01 402 aa29.22■■■□□ 2.27
UBE2E3-202ENST00000410062 HDAC1Q13547 482 aaPredicted RBP29.22■■■□□ 2.27
UBE2E3-202ENST00000410062 DLK2Q6UY11 383 aa29.22■■■□□ 2.27
UBE2E3-202ENST00000410062 CDC37L1Q7L3B6 337 aa29.22■■■□□ 2.27
UBE2E3-202ENST00000410062 ZNF512BQ96KM6 892 aaPredicted RBP29.22■■■□□ 2.27
UBE2E3-202ENST00000410062 KRT26Q7Z3Y9 468 aa29.21■■■□□ 2.27
UBE2E3-202ENST00000410062 ZGPATQ8N5A5 531 aaKnown RBP29.21■■■□□ 2.27
UBE2E3-202ENST00000410062 AKAP11Q9UKA4 1901 aa29.21■■■□□ 2.27
UBE2E3-202ENST00000410062 AOX1Q06278 1338 aa29.2■■■□□ 2.27
UBE2E3-202ENST00000410062 ADM5C9JUS6 153 aa29.2■■■□□ 2.26
UBE2E3-202ENST00000410062 TBC1D9Q6ZT07 1266 aa29.2■■■□□ 2.26
UBE2E3-202ENST00000410062 MAST3O60307 1309 aa29.2■■■□□ 2.26
UBE2E3-202ENST00000410062 APLP1P51693 650 aa29.19■■■□□ 2.26
UBE2E3-202ENST00000410062 TEKT1Q969V4 418 aa29.19■■■□□ 2.26
UBE2E3-202ENST00000410062 HDLBPQ00341 1268 aaKnown RBP29.18■■■□□ 2.26
UBE2E3-202ENST00000410062 SULF1Q8IWU6 871 aa29.18■■■□□ 2.26
UBE2E3-202ENST00000410062 DIXDC1Q155Q3 683 aa29.18■■■□□ 2.26
UBE2E3-202ENST00000410062 PITPNM2Q9BZ72 1349 aa29.17■■■□□ 2.26
UBE2E3-202ENST00000410062 CLRN2A0PK11 232 aa29.17■■■□□ 2.26
UBE2E3-202ENST00000410062 ZAP70P43403 619 aa29.17■■■□□ 2.26
UBE2E3-202ENST00000410062 HTRA3P83110 453 aa29.17■■■□□ 2.26
UBE2E3-202ENST00000410062 MRIQ9BWK5 157 aa29.17■■■□□ 2.26
UBE2E3-202ENST00000410062 ECM29Q5VYK3 1845 aa29.17■■■□□ 2.26
UBE2E3-202ENST00000410062 MYO1BO43795 1136 aa29.16■■■□□ 2.26
UBE2E3-202ENST00000410062 SPTY2D1Q68D10 685 aaPredicted RBP29.16■■■□□ 2.26
UBE2E3-202ENST00000410062 NDUFB9Q9Y6M9 179 aa29.16■■■□□ 2.26
UBE2E3-202ENST00000410062 CEP350Q5VT06 3117 aa29.15■■■□□ 2.26
UBE2E3-202ENST00000410062 CYP2E1P05181 493 aaPredicted RBP29.15■■■□□ 2.26
UBE2E3-202ENST00000410062 ERICH6Q7L0X2 663 aa29.15■■■□□ 2.26
UBE2E3-202ENST00000410062 DZIP1Q86YF9 867 aaKnown RBP29.15■■■□□ 2.26
UBE2E3-202ENST00000410062 RWDD1Q9H446 243 aaPredicted RBP29.15■■■□□ 2.26
UBE2E3-202ENST00000410062 TDRD3Q9H7E2 651 aaKnown RBP29.15■■■□□ 2.26
UBE2E3-202ENST00000410062 HHIPL2Q6UWX4 724 aa29.14■■■□□ 2.26
UBE2E3-202ENST00000410062 ZDHHC15Q96MV8 337 aa29.14■■■□□ 2.26
UBE2E3-202ENST00000410062 IGHDP01880 384 aa29.13■■■□□ 2.25
UBE2E3-202ENST00000410062 GCC1Q96CN9 775 aa29.13■■■□□ 2.25
UBE2E3-202ENST00000410062 APOBEC3HQ6NTF7 200 aaKnown RBP29.13■■■□□ 2.25
UBE2E3-202ENST00000410062 ZNF408Q9H9D4 720 aa29.13■■■□□ 2.25
UBE2E3-202ENST00000410062 VEZTQ9HBM0 779 aa29.13■■■□□ 2.25
UBE2E3-202ENST00000410062 RAI14Q9P0K7 980 aa29.13■■■□□ 2.25
UBE2E3-202ENST00000410062 LRP2BPQ9P2M1 347 aa29.13■■■□□ 2.25
UBE2E3-202ENST00000410062 DAGLAQ9Y4D2 1042 aa29.13■■■□□ 2.25
UBE2E3-202ENST00000410062 TRPM7Q96QT4 1865 aa29.13■■■□□ 2.25
UBE2E3-202ENST00000410062 MECOMQ03112 1051 aa29.12■■■□□ 2.25
UBE2E3-202ENST00000410062 CST9Q5W186 159 aa29.12■■■□□ 2.25
UBE2E3-202ENST00000410062 APOBEC3FQ8IUX4 373 aaKnown RBP29.12■■■□□ 2.25
UBE2E3-202ENST00000410062 ZNF70Q9UC06 446 aaPredicted RBP29.12■■■□□ 2.25
UBE2E3-202ENST00000410062 MYH2Q9UKX2 1941 aa29.11■■■□□ 2.25
UBE2E3-202ENST00000410062 CELF2O95319 508 aaKnown RBP29.11■■■□□ 2.25
UBE2E3-202ENST00000410062 SPDYE2Q495Y8 402 aa29.11■■■□□ 2.25
UBE2E3-202ENST00000410062 ANKRD45Q5TZF3 282 aa29.11■■■□□ 2.25
UBE2E3-202ENST00000410062 ZNF384Q8TF68 577 aa29.11■■■□□ 2.25
UBE2E3-202ENST00000410062 PIH1D3Q9NQM4 214 aaKnown RBP29.11■■■□□ 2.25
UBE2E3-202ENST00000410062 MYO5AQ9Y4I1 1855 aaKnown RBP29.1■■■□□ 2.25
UBE2E3-202ENST00000410062 TMEM88BA6NKF7 163 aa29.1■■■□□ 2.25
UBE2E3-202ENST00000410062 PRAMEF18Q5VWM3 479 aa29.1■■■□□ 2.25
UBE2E3-202ENST00000410062 CDCA5Q96FF9 252 aa29.1■■■□□ 2.25
UBE2E3-202ENST00000410062 NSUN4Q96CB9 384 aaKnown RBP29.09■■■□□ 2.25
UBE2E3-202ENST00000410062 ANTXR1Q9H6X2 564 aa29.09■■■□□ 2.25
UBE2E3-202ENST00000410062 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.09■■■□□ 2.25
UBE2E3-202ENST00000410062 CREBZFQ9NS37 354 aa29.09■■■□□ 2.25
UBE2E3-202ENST00000410062 ATP5JP18859 108 aa29.08■■■□□ 2.25
UBE2E3-202ENST00000410062 DNAJC2Q99543 621 aaKnown RBP29.08■■■□□ 2.25
UBE2E3-202ENST00000410062 DEFB129Q9H1M3 183 aa29.08■■■□□ 2.25
UBE2E3-202ENST00000410062 BOLA2Q9H3K6 86 aa29.08■■■□□ 2.25
UBE2E3-202ENST00000410062 CACNB3P54284 484 aa29.07■■■□□ 2.24
UBE2E3-202ENST00000410062 SLF2Q8IX21 1173 aa29.07■■■□□ 2.24
UBE2E3-202ENST00000410062 ZBTB47Q9UFB7 747 aaPredicted RBP29.07■■■□□ 2.24
UBE2E3-202ENST00000410062 GAKO14976 1311 aa29.06■■■□□ 2.24
UBE2E3-202ENST00000410062 TSHZ3Q63HK5 1081 aa29.06■■■□□ 2.24
UBE2E3-202ENST00000410062 SMC5Q8IY18 1101 aa29.06■■■□□ 2.24
UBE2E3-202ENST00000410062 OTUD7AQ8TE49 926 aaPredicted RBP29.06■■■□□ 2.24
UBE2E3-202ENST00000410062 ECHDC1Q9NTX5 307 aa29.06■■■□□ 2.24
UBE2E3-202ENST00000410062 MROH7-TTC4A0A0A0MT08 1334 aa29.06■■■□□ 2.24
UBE2E3-202ENST00000410062 TCP10L2B9ZVM9 353 aa29.05■■■□□ 2.24
UBE2E3-202ENST00000410062 B4GALNT3Q6L9W6 998 aa29.05■■■□□ 2.24
UBE2E3-202ENST00000410062 FAM163AQ96GL9 167 aaPredicted RBP29.05■■■□□ 2.24
UBE2E3-202ENST00000410062 IDH1O75874 414 aaKnown RBP29.05■■■□□ 2.24
UBE2E3-202ENST00000410062 GSTO1P78417 241 aa29.05■■■□□ 2.24
UBE2E3-202ENST00000410062 CDC42EP5Q6NZY7 148 aa29.05■■■□□ 2.24
UBE2E3-202ENST00000410062 EDC3Q96F86 508 aaKnown RBP29.05■■■□□ 2.24
UBE2E3-202ENST00000410062 GOLIM4O00461 696 aa29.04■■■□□ 2.24
UBE2E3-202ENST00000410062 CENPBP07199 599 aaPredicted RBP29.04■■■□□ 2.24
UBE2E3-202ENST00000410062 RASA3Q14644 834 aa29.04■■■□□ 2.24
UBE2E3-202ENST00000410062 GPATCH3Q96I76 525 aa29.04■■■□□ 2.24
UBE2E3-202ENST00000410062 MAST2Q6P0Q8 1798 aa29.03■■■□□ 2.24
UBE2E3-202ENST00000410062 NAA16Q6N069 864 aaPredicted RBP29.03■■■□□ 2.24
UBE2E3-202ENST00000410062 USP40Q9NVE5 1235 aa29.03■■■□□ 2.24
UBE2E3-202ENST00000410062 TMOD2Q9NZR1 351 aa29.03■■■□□ 2.24
UBE2E3-202ENST00000410062 ABT1Q9ULW3 272 aaKnown RBP29.03■■■□□ 2.24
UBE2E3-202ENST00000410062 BTDP43251 543 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms