RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 IFIT2P09913 472 aaKnown RBP13.36□□□□□ -0.27
CHMP3-205ENST00000409810 USP48Q86UV5 1035 aa13.36□□□□□ -0.27
CHMP3-205ENST00000409810 SPATA5Q8NB90 893 aa13.36□□□□□ -0.27
CHMP3-205ENST00000409810 EAF2Q96CJ1 260 aaPredicted RBP13.36□□□□□ -0.27
CHMP3-205ENST00000409810 ZNF512BQ96KM6 892 aaPredicted RBP13.36□□□□□ -0.27
CHMP3-205ENST00000409810 MRIQ9BWK5 157 aa13.36□□□□□ -0.27
CHMP3-205ENST00000409810 LRRCC1Q9C099 1032 aa13.36□□□□□ -0.27
CHMP3-205ENST00000409810 CCDC8Q9H0W5 538 aaPredicted RBP13.36□□□□□ -0.27
CHMP3-205ENST00000409810 IL1RAPL2Q9NP60 686 aa13.36□□□□□ -0.27
CHMP3-205ENST00000409810 ABCF2Q9UG63 623 aa13.36□□□□□ -0.27
CHMP3-205ENST00000409810 DBNLQ9UJU6 430 aaKnown RBP13.36□□□□□ -0.27
CHMP3-205ENST00000409810 MAST2Q6P0Q8 1798 aa13.35□□□□□ -0.27
CHMP3-205ENST00000409810 TRAF5O00463 557 aa13.35□□□□□ -0.27
CHMP3-205ENST00000409810 CELF2O95319 508 aaKnown RBP13.35□□□□□ -0.27
CHMP3-205ENST00000409810 TNFAIP1Q13829 316 aa13.35□□□□□ -0.27
CHMP3-205ENST00000409810 HHIPL2Q6UWX4 724 aa13.35□□□□□ -0.27
CHMP3-205ENST00000409810 ERICH6Q7L0X2 663 aa13.35□□□□□ -0.27
CHMP3-205ENST00000409810 DZIP1Q86YF9 867 aaKnown RBP13.35□□□□□ -0.27
CHMP3-205ENST00000409810 SLF2Q8IX21 1173 aa13.35□□□□□ -0.27
CHMP3-205ENST00000409810 DCTPP1Q9H773 170 aa13.35□□□□□ -0.27
CHMP3-205ENST00000409810 PCDHB15Q9Y5E8 787 aa13.35□□□□□ -0.27
CHMP3-205ENST00000409810 ASTN2O75129 1339 aaPredicted RBP13.35□□□□□ -0.27
CHMP3-205ENST00000409810 CEP350Q5VT06 3117 aa13.34□□□□□ -0.27
CHMP3-205ENST00000409810 ADM5C9JUS6 153 aa13.34□□□□□ -0.27
CHMP3-205ENST00000409810 IGSF3O75054 1194 aa13.34□□□□□ -0.27
CHMP3-205ENST00000409810 PRDX5P30044 214 aa13.34□□□□□ -0.27
CHMP3-205ENST00000409810 MCAMP43121 646 aa13.34□□□□□ -0.27
CHMP3-205ENST00000409810 GRIK5Q16478 980 aa13.34□□□□□ -0.27
CHMP3-205ENST00000409810 PRMT6Q96LA8 375 aaPredicted RBP13.34□□□□□ -0.27
CHMP3-205ENST00000409810 ZDHHC15Q96MV8 337 aa13.34□□□□□ -0.27
CHMP3-205ENST00000409810 ZNF408Q9H9D4 720 aa13.34□□□□□ -0.27
CHMP3-205ENST00000409810 VEZTQ9HBM0 779 aa13.34□□□□□ -0.27
CHMP3-205ENST00000409810 TMOD2Q9NZR1 351 aa13.34□□□□□ -0.27
CHMP3-205ENST00000409810 HMG20BQ9P0W2 317 aa13.34□□□□□ -0.27
CHMP3-205ENST00000409810 PPP2R3BQ9Y5P8 575 aa13.34□□□□□ -0.27
CHMP3-205ENST00000409810 MYO5AQ9Y4I1 1855 aaKnown RBP13.33□□□□□ -0.27
CHMP3-205ENST00000409810 AK9Q5TCS8 1911 aa13.33□□□□□ -0.28
CHMP3-205ENST00000409810 NF2P35240 595 aa13.33□□□□□ -0.28
CHMP3-205ENST00000409810 SPDYE2Q495Y8 402 aa13.33□□□□□ -0.28
CHMP3-205ENST00000409810 TLR7Q9NYK1 1049 aaKnown RBP13.33□□□□□ -0.28
CHMP3-205ENST00000409810 ZBTB47Q9UFB7 747 aaPredicted RBP13.33□□□□□ -0.28
CHMP3-205ENST00000409810 ABT1Q9ULW3 272 aaKnown RBP13.33□□□□□ -0.28
CHMP3-205ENST00000409810 PAPPA2Q9BXP8 1791 aa13.32□□□□□ -0.28
CHMP3-205ENST00000409810 DOCK2Q92608 1830 aa13.32□□□□□ -0.28
CHMP3-205ENST00000409810 CLRN2A0PK11 232 aa13.32□□□□□ -0.28
CHMP3-205ENST00000409810 TNNI2P48788 182 aa13.32□□□□□ -0.28
CHMP3-205ENST00000409810 GSTO1P78417 241 aa13.32□□□□□ -0.28
CHMP3-205ENST00000409810 HDAC1Q13547 482 aaPredicted RBP13.32□□□□□ -0.28
CHMP3-205ENST00000409810 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.32□□□□□ -0.28
CHMP3-205ENST00000409810 CDCA5Q96FF9 252 aa13.32□□□□□ -0.28
CHMP3-205ENST00000409810 BCL11AQ9H165 835 aa13.32□□□□□ -0.28
CHMP3-205ENST00000409810 LRP2BPQ9P2M1 347 aa13.32□□□□□ -0.28
CHMP3-205ENST00000409810 ZNF70Q9UC06 446 aaPredicted RBP13.32□□□□□ -0.28
CHMP3-205ENST00000409810 PCDHAC2Q9Y5I4 1007 aa13.32□□□□□ -0.28
CHMP3-205ENST00000409810 LDHCP07864 332 aa13.31□□□□□ -0.28
CHMP3-205ENST00000409810 HTRA3P83110 453 aa13.31□□□□□ -0.28
CHMP3-205ENST00000409810 FMR1Q06787 632 aaKnown RBP eCLIP13.31□□□□□ -0.28
CHMP3-205ENST00000409810 CST9Q5W186 159 aa13.31□□□□□ -0.28
CHMP3-205ENST00000409810 PI16Q6UXB8 463 aa13.31□□□□□ -0.28
CHMP3-205ENST00000409810 C2orf69Q8N8R5 385 aa13.31□□□□□ -0.28
CHMP3-205ENST00000409810 EXOC6Q8TAG9 804 aa13.31□□□□□ -0.28
CHMP3-205ENST00000409810 GCC1Q96CN9 775 aa13.31□□□□□ -0.28
CHMP3-205ENST00000409810 GPATCH3Q96I76 525 aa13.31□□□□□ -0.28
CHMP3-205ENST00000409810 TDRD3Q9H7E2 651 aaKnown RBP13.31□□□□□ -0.28
CHMP3-205ENST00000409810 GBA2Q9HCG7 927 aaPredicted RBP13.31□□□□□ -0.28
CHMP3-205ENST00000409810 RAI14Q9P0K7 980 aa13.31□□□□□ -0.28
CHMP3-205ENST00000409810 MYH7P12883 1935 aa13.31□□□□□ -0.28
CHMP3-205ENST00000409810 ZAP70P43403 619 aa13.3□□□□□ -0.28
CHMP3-205ENST00000409810 FKBP1BP68106 108 aa13.3□□□□□ -0.28
CHMP3-205ENST00000409810 TTF1Q15361 905 aaPredicted RBP13.3□□□□□ -0.28
CHMP3-205ENST00000409810 DIXDC1Q155Q3 683 aa13.3□□□□□ -0.28
CHMP3-205ENST00000409810 APOBEC3HQ6NTF7 200 aaKnown RBP13.3□□□□□ -0.28
CHMP3-205ENST00000409810 KLRG1Q96E93 195 aa13.3□□□□□ -0.28
CHMP3-205ENST00000409810 DEFB129Q9H1M3 183 aa13.3□□□□□ -0.28
CHMP3-205ENST00000409810 RWDD1Q9H446 243 aaPredicted RBP13.3□□□□□ -0.28
CHMP3-205ENST00000409810 SNRKQ9NRH2 765 aa13.3□□□□□ -0.28
CHMP3-205ENST00000409810 DAGLAQ9Y4D2 1042 aa13.3□□□□□ -0.28
CHMP3-205ENST00000409810 TLL2Q9Y6L7 1015 aa13.3□□□□□ -0.28
CHMP3-205ENST00000409810 GAKO14976 1311 aa13.3□□□□□ -0.28
CHMP3-205ENST00000409810 CNTNAP1P78357 1384 aa13.3□□□□□ -0.28
CHMP3-205ENST00000409810 RASSF10A6NK89 507 aa13.29□□□□□ -0.28
CHMP3-205ENST00000409810 MECOMQ03112 1051 aa13.29□□□□□ -0.28
CHMP3-205ENST00000409810 FKBP1CQ5VVH2 108 aa13.29□□□□□ -0.28
CHMP3-205ENST00000409810 TMED8Q6PL24 325 aaPredicted RBP13.29□□□□□ -0.28
CHMP3-205ENST00000409810 TBC1D9Q6ZT07 1266 aa13.29□□□□□ -0.28
CHMP3-205ENST00000409810 FAM163AQ96GL9 167 aaPredicted RBP13.29□□□□□ -0.28
CHMP3-205ENST00000409810 NOL10Q9BSC4 688 aaKnown RBP13.29□□□□□ -0.28
CHMP3-205ENST00000409810 MKRN1Q9UHC7 482 aaKnown RBP13.29□□□□□ -0.28
CHMP3-205ENST00000409810 SCAF8Q9UPN6 1271 aaKnown RBP13.29□□□□□ -0.28
CHMP3-205ENST00000409810 MROH7-TTC4A0A0A0MT08 1334 aa13.29□□□□□ -0.28
CHMP3-205ENST00000409810 TCP10L2B9ZVM9 353 aa13.28□□□□□ -0.28
CHMP3-205ENST00000409810 SMARCA5O60264 1052 aaPredicted RBP13.28□□□□□ -0.28
CHMP3-205ENST00000409810 CYP2E1P05181 493 aaPredicted RBP13.28□□□□□ -0.28
CHMP3-205ENST00000409810 ECE1P42892 770 aa13.28□□□□□ -0.28
CHMP3-205ENST00000409810 TTLL12Q14166 644 aaPredicted RBP13.28□□□□□ -0.28
CHMP3-205ENST00000409810 RASA3Q14644 834 aa13.28□□□□□ -0.28
CHMP3-205ENST00000409810 DEFB115Q30KQ5 88 aa13.28□□□□□ -0.28
CHMP3-205ENST00000409810 SUPT20HL1Q3ZLR7 823 aa13.28□□□□□ -0.28
CHMP3-205ENST00000409810 NAA16Q6N069 864 aaPredicted RBP13.28□□□□□ -0.28
CHMP3-205ENST00000409810 PAXIP1Q6ZW49 1069 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms