RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 MYO5AQ9Y4I1 1855 aaKnown RBP38.33■■■■□ 3.73
TRAF3IP1-203ENST00000409739 HDLBPQ00341 1268 aaKnown RBP38.33■■■■□ 3.73
TRAF3IP1-203ENST00000409739 EAF2Q96CJ1 260 aaPredicted RBP38.33■■■■□ 3.73
TRAF3IP1-203ENST00000409739 PRDX5P30044 214 aa38.32■■■■□ 3.72
TRAF3IP1-203ENST00000409739 APOBEC3FQ8IUX4 373 aaKnown RBP38.32■■■■□ 3.72
TRAF3IP1-203ENST00000409739 RHPN1Q8TCX5 695 aa38.32■■■■□ 3.72
TRAF3IP1-203ENST00000409739 CDCA5Q96FF9 252 aa38.32■■■■□ 3.72
TRAF3IP1-203ENST00000409739 DBNLQ9UJU6 430 aaKnown RBP38.32■■■■□ 3.72
TRAF3IP1-203ENST00000409739 CNTNAP1P78357 1384 aa38.31■■■■□ 3.72
TRAF3IP1-203ENST00000409739 MYO1BO43795 1136 aa38.31■■■■□ 3.72
TRAF3IP1-203ENST00000409739 TEKT1Q969V4 418 aa38.31■■■■□ 3.72
TRAF3IP1-203ENST00000409739 TLR7Q9NYK1 1049 aaKnown RBP38.31■■■■□ 3.72
TRAF3IP1-203ENST00000409739 ABT1Q9ULW3 272 aaKnown RBP38.31■■■■□ 3.72
TRAF3IP1-203ENST00000409739 CLRN2A0PK11 232 aa38.3■■■■□ 3.72
TRAF3IP1-203ENST00000409739 HMG20BQ9P0W2 317 aa38.3■■■■□ 3.72
TRAF3IP1-203ENST00000409739 MKRN1Q9UHC7 482 aaKnown RBP38.3■■■■□ 3.72
TRAF3IP1-203ENST00000409739 PI16Q6UXB8 463 aa38.29■■■■□ 3.72
TRAF3IP1-203ENST00000409739 ZGPATQ8N5A5 531 aaKnown RBP38.29■■■■□ 3.72
TRAF3IP1-203ENST00000409739 KIF1BPQ96EK5 621 aa38.29■■■■□ 3.72
TRAF3IP1-203ENST00000409739 CCDC8Q9H0W5 538 aaPredicted RBP38.29■■■■□ 3.72
TRAF3IP1-203ENST00000409739 IL1RAPL2Q9NP60 686 aa38.29■■■■□ 3.72
TRAF3IP1-203ENST00000409739 APBB1O00213 710 aa38.28■■■■□ 3.72
TRAF3IP1-203ENST00000409739 LDHBP07195 334 aaKnown RBP38.28■■■■□ 3.72
TRAF3IP1-203ENST00000409739 UQCRFS1P1P0C7P4 283 aa38.28■■■■□ 3.72
TRAF3IP1-203ENST00000409739 MCAMP43121 646 aa38.28■■■■□ 3.72
TRAF3IP1-203ENST00000409739 MRIQ9BWK5 157 aa38.28■■■■□ 3.72
TRAF3IP1-203ENST00000409739 TLL2Q9Y6L7 1015 aa38.28■■■■□ 3.72
TRAF3IP1-203ENST00000409739 PAPPA2Q9BXP8 1791 aa38.28■■■■□ 3.72
TRAF3IP1-203ENST00000409739 MAST2Q6P0Q8 1798 aa38.27■■■■□ 3.72
TRAF3IP1-203ENST00000409739 RASSF10A6NK89 507 aa38.27■■■■□ 3.72
TRAF3IP1-203ENST00000409739 CCDC158Q5M9N0 1113 aa38.27■■■■□ 3.72
TRAF3IP1-203ENST00000409739 TTC39AQ5SRH9 613 aa38.27■■■■□ 3.72
TRAF3IP1-203ENST00000409739 SPATA5Q8NB90 893 aa38.27■■■■□ 3.72
TRAF3IP1-203ENST00000409739 RAB11FIP3O75154 756 aa38.26■■■■□ 3.72
TRAF3IP1-203ENST00000409739 SPDYE2Q495Y8 402 aa38.26■■■■□ 3.72
TRAF3IP1-203ENST00000409739 AACSQ86V21 672 aa38.26■■■■□ 3.72
TRAF3IP1-203ENST00000409739 ZDHHC15Q96MV8 337 aa38.26■■■■□ 3.72
TRAF3IP1-203ENST00000409739 HHIPL2Q6UWX4 724 aa38.25■■■■□ 3.71
TRAF3IP1-203ENST00000409739 TDRD3Q9H7E2 651 aaKnown RBP38.25■■■■□ 3.71
TRAF3IP1-203ENST00000409739 VEZTQ9HBM0 779 aa38.25■■■■□ 3.71
TRAF3IP1-203ENST00000409739 PCDHB15Q9Y5E8 787 aa38.25■■■■□ 3.71
TRAF3IP1-203ENST00000409739 PRAMEF18Q5VWM3 479 aa38.24■■■■□ 3.71
TRAF3IP1-203ENST00000409739 SAPCD2Q86UD0 394 aa38.24■■■■□ 3.71
TRAF3IP1-203ENST00000409739 ZNF70Q9UC06 446 aaPredicted RBP38.24■■■■□ 3.71
TRAF3IP1-203ENST00000409739 PCNTO95613 3336 aa38.23■■■■□ 3.71
TRAF3IP1-203ENST00000409739 DIXDC1Q155Q3 683 aa38.23■■■■□ 3.71
TRAF3IP1-203ENST00000409739 GBA2Q9HCG7 927 aaPredicted RBP38.23■■■■□ 3.71
TRAF3IP1-203ENST00000409739 ABCF2Q9UG63 623 aa38.23■■■■□ 3.71
TRAF3IP1-203ENST00000409739 ZNF512BQ96KM6 892 aaPredicted RBP38.22■■■■□ 3.71
TRAF3IP1-203ENST00000409739 DEFB115Q30KQ5 88 aa38.21■■■■□ 3.71
TRAF3IP1-203ENST00000409739 APOBEC3HQ6NTF7 200 aaKnown RBP38.21■■■■□ 3.71
TRAF3IP1-203ENST00000409739 CLASRPQ8N2M8 674 aaKnown RBP38.21■■■■□ 3.71
TRAF3IP1-203ENST00000409739 DEFB129Q9H1M3 183 aa38.21■■■■□ 3.71
TRAF3IP1-203ENST00000409739 DAGLAQ9Y4D2 1042 aa38.21■■■■□ 3.71
TRAF3IP1-203ENST00000409739 DOCK2Q92608 1830 aa38.21■■■■□ 3.71
TRAF3IP1-203ENST00000409739 THSD7BQ9C0I4 1608 aa38.2■■■■□ 3.71
TRAF3IP1-203ENST00000409739 SUPT16HQ9Y5B9 1047 aaKnown RBP38.2■■■■□ 3.71
TRAF3IP1-203ENST00000409739 SPTY2D1Q68D10 685 aaPredicted RBP38.19■■■■□ 3.7
TRAF3IP1-203ENST00000409739 TBC1D9Q6ZT07 1266 aa38.18■■■■□ 3.7
TRAF3IP1-203ENST00000409739 DZIP1Q86YF9 867 aaKnown RBP38.18■■■■□ 3.7
TRAF3IP1-203ENST00000409739 C2orf69Q8N8R5 385 aa38.18■■■■□ 3.7
TRAF3IP1-203ENST00000409739 JMYQ8N9B5 988 aa38.18■■■■□ 3.7
TRAF3IP1-203ENST00000409739 SNRKQ9NRH2 765 aa38.18■■■■□ 3.7
TRAF3IP1-203ENST00000409739 PPP2R3BQ9Y5P8 575 aa38.18■■■■□ 3.7
TRAF3IP1-203ENST00000409739 VEGFBP49765 207 aa38.17■■■■□ 3.7
TRAF3IP1-203ENST00000409739 ERICH6Q7L0X2 663 aa38.17■■■■□ 3.7
TRAF3IP1-203ENST00000409739 TNFAIP1Q13829 316 aa38.16■■■■□ 3.7
TRAF3IP1-203ENST00000409739 DCTPP1Q9H773 170 aa38.16■■■■□ 3.7
TRAF3IP1-203ENST00000409739 SSC5DA1L4H1 1573 aa38.15■■■■□ 3.7
TRAF3IP1-203ENST00000409739 HUNKP57058 714 aa38.15■■■■□ 3.7
TRAF3IP1-203ENST00000409739 HHIPL1Q96JK4 782 aa38.15■■■■□ 3.7
TRAF3IP1-203ENST00000409739 LRRCC1Q9C099 1032 aa38.15■■■■□ 3.7
TRAF3IP1-203ENST00000409739 GAKO14976 1311 aa38.14■■■■□ 3.7
TRAF3IP1-203ENST00000409739 RASA3Q14644 834 aa38.14■■■■□ 3.7
TRAF3IP1-203ENST00000409739 BCL11AQ9H165 835 aa38.14■■■■□ 3.7
TRAF3IP1-203ENST00000409739 AK9Q5TCS8 1911 aa38.13■■■■□ 3.69
TRAF3IP1-203ENST00000409739 TCP10L2B9ZVM9 353 aa38.13■■■■□ 3.69
TRAF3IP1-203ENST00000409739 IFIT2P09913 472 aaKnown RBP38.13■■■■□ 3.69
TRAF3IP1-203ENST00000409739 NF2P35240 595 aa38.13■■■■□ 3.69
TRAF3IP1-203ENST00000409739 CACNB3P54284 484 aa38.13■■■■□ 3.69
TRAF3IP1-203ENST00000409739 MECOMQ03112 1051 aa38.13■■■■□ 3.69
TRAF3IP1-203ENST00000409739 PAXIP1Q6ZW49 1069 aaPredicted RBP38.13■■■■□ 3.69
TRAF3IP1-203ENST00000409739 ZNF384Q8TF68 577 aa38.13■■■■□ 3.69
TRAF3IP1-203ENST00000409739 CYP2E1P05181 493 aaPredicted RBP38.12■■■■□ 3.69
TRAF3IP1-203ENST00000409739 ZAP70P43403 619 aa38.12■■■■□ 3.69
TRAF3IP1-203ENST00000409739 FKBP1BP68106 108 aa38.12■■■■□ 3.69
TRAF3IP1-203ENST00000409739 CYP4F22Q6NT55 531 aa38.12■■■■□ 3.69
TRAF3IP1-203ENST00000409739 TMOD2Q9NZR1 351 aa38.12■■■■□ 3.69
TRAF3IP1-203ENST00000409739 CAPNS2Q96L46 248 aa38.11■■■■□ 3.69
TRAF3IP1-203ENST00000409739 OTOFQ9HC10 1997 aa38.11■■■■□ 3.69
TRAF3IP1-203ENST00000409739 WDR33Q9C0J8 1336 aaKnown RBP38.11■■■■□ 3.69
TRAF3IP1-203ENST00000409739 SMARCA5O60264 1052 aaPredicted RBP38.1■■■■□ 3.69
TRAF3IP1-203ENST00000409739 SLF2Q8IX21 1173 aa38.1■■■■□ 3.69
TRAF3IP1-203ENST00000409739 RAI14Q9P0K7 980 aa38.1■■■■□ 3.69
TRAF3IP1-203ENST00000409739 MROH7-TTC4A0A0A0MT08 1334 aa38.1■■■■□ 3.69
TRAF3IP1-203ENST00000409739 TNNI2P48788 182 aa38.09■■■■□ 3.69
TRAF3IP1-203ENST00000409739 AAMPQ13685 434 aa38.09■■■■□ 3.69
TRAF3IP1-203ENST00000409739 CDC42EP5Q6NZY7 148 aa38.09■■■■□ 3.69
TRAF3IP1-203ENST00000409739 MOB2Q70IA6 237 aa38.09■■■■□ 3.69
TRAF3IP1-203ENST00000409739 NSUN4Q96CB9 384 aaKnown RBP38.09■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms