RNA–Protein interactions for RNA: ENST00000409606.5

R3HDM1-203, Transcript of R3H domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene R3HDM1, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-203ENST00000409606 YDJCA8MPS7 323 aa5.93□□□□□ -1.46
R3HDM1-203ENST00000409606 YBX3P16989 372 aaKnown RBP eCLIP5.93□□□□□ -1.46
R3HDM1-203ENST00000409606 PHKA1P46020 1223 aa5.93□□□□□ -1.46
R3HDM1-203ENST00000409606 RHBDL3P58872 404 aa5.93□□□□□ -1.46
R3HDM1-203ENST00000409606 EXOSC10Q01780 885 aaKnown RBP5.93□□□□□ -1.46
R3HDM1-203ENST00000409606 FKBP1CQ5VVH2 108 aa5.93□□□□□ -1.46
R3HDM1-203ENST00000409606 PRPF40BQ6NWY9 871 aaKnown RBP5.93□□□□□ -1.46
R3HDM1-203ENST00000409606 SPATA5Q8NB90 893 aa5.93□□□□□ -1.46
R3HDM1-203ENST00000409606 CNKSR1Q969H4 720 aa5.93□□□□□ -1.46
R3HDM1-203ENST00000409606 PAG1Q9NWQ8 432 aa5.93□□□□□ -1.46
R3HDM1-203ENST00000409606 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.93□□□□□ -1.46
R3HDM1-203ENST00000409606 PARP3Q9Y6F1 533 aa5.93□□□□□ -1.46
R3HDM1-203ENST00000409606 CNTNAP1P78357 1384 aa5.92□□□□□ -1.46
R3HDM1-203ENST00000409606 MLLT1Q03111 559 aaPredicted RBP5.92□□□□□ -1.46
R3HDM1-203ENST00000409606 HHIPL2Q6UWX4 724 aa5.92□□□□□ -1.46
R3HDM1-203ENST00000409606 L3MBTL3Q96JM7 780 aaPredicted RBP5.92□□□□□ -1.46
R3HDM1-203ENST00000409606 ANTXR1Q9H6X2 564 aa5.92□□□□□ -1.46
R3HDM1-203ENST00000409606 DENND2AQ9ULE3 1009 aa5.92□□□□□ -1.46
R3HDM1-203ENST00000409606 SYNPO2Q9UMS6 1093 aa5.92□□□□□ -1.46
R3HDM1-203ENST00000409606 MORC2Q9Y6X9 1032 aaPredicted RBP5.92□□□□□ -1.46
R3HDM1-203ENST00000409606 RCAN1P53805 252 aa5.92□□□□□ -1.46
R3HDM1-203ENST00000409606 GABPAQ06546 454 aa5.92□□□□□ -1.46
R3HDM1-203ENST00000409606 LDHAL6AQ6ZMR3 332 aa5.92□□□□□ -1.46
R3HDM1-203ENST00000409606 CERS5Q8N5B7 392 aa5.92□□□□□ -1.46
R3HDM1-203ENST00000409606 POLR2AP24928 1970 aaKnown RBP5.92□□□□□ -1.46
R3HDM1-203ENST00000409606 CCDC171Q6TFL3 1326 aa5.92□□□□□ -1.46
R3HDM1-203ENST00000409606 A0A0D9SFI3 127 aa5.92□□□□□ -1.46
R3HDM1-203ENST00000409606 PCP11498 1178 aaKnown RBP5.92□□□□□ -1.46
R3HDM1-203ENST00000409606 CUL4AQ13619 759 aa5.92□□□□□ -1.46
R3HDM1-203ENST00000409606 AACSQ86V21 672 aa5.92□□□□□ -1.46
R3HDM1-203ENST00000409606 RTKN2Q8IZC4 609 aa5.92□□□□□ -1.46
R3HDM1-203ENST00000409606 IDI2Q9BXS1 227 aa5.92□□□□□ -1.46
R3HDM1-203ENST00000409606 CREBZFQ9NS37 354 aa5.92□□□□□ -1.46
R3HDM1-203ENST00000409606 M0R2C6 588 aa5.91□□□□□ -1.46
R3HDM1-203ENST00000409606 RNF113AO15541 343 aaKnown RBP5.91□□□□□ -1.46
R3HDM1-203ENST00000409606 IGHMBP2P38935 993 aaKnown RBP5.91□□□□□ -1.46
R3HDM1-203ENST00000409606 STRIP1Q5VSL9 837 aa5.91□□□□□ -1.46
R3HDM1-203ENST00000409606 PODNQ7Z5L7 613 aa5.91□□□□□ -1.46
R3HDM1-203ENST00000409606 JARID2Q92833 1246 aaPredicted RBP5.91□□□□□ -1.46
R3HDM1-203ENST00000409606 STRBPQ96SI9 672 aaKnown RBP5.91□□□□□ -1.46
R3HDM1-203ENST00000409606 ZSWIM6Q9HCJ5 1215 aa5.91□□□□□ -1.46
R3HDM1-203ENST00000409606 CD209Q9NNX6 404 aa5.91□□□□□ -1.46
R3HDM1-203ENST00000409606 ARID2Q68CP9 1835 aa5.91□□□□□ -1.46
R3HDM1-203ENST00000409606 APBB1O00213 710 aa5.91□□□□□ -1.46
R3HDM1-203ENST00000409606 APPBP2Q92624 585 aa5.91□□□□□ -1.46
R3HDM1-203ENST00000409606 EHD4Q9H223 541 aa5.91□□□□□ -1.46
R3HDM1-203ENST00000409606 EPB41L4AQ9HCS5 686 aaPredicted RBP5.91□□□□□ -1.46
R3HDM1-203ENST00000409606 TCP11L1Q9NUJ3 509 aa5.91□□□□□ -1.46
R3HDM1-203ENST00000409606 MROH7-TTC4A0A0A0MT08 1334 aa5.91□□□□□ -1.46
R3HDM1-203ENST00000409606 DDX46Q7L014 1031 aaKnown RBP5.9□□□□□ -1.46
R3HDM1-203ENST00000409606 CNTROBQ8N137 903 aa5.9□□□□□ -1.46
R3HDM1-203ENST00000409606 ZDHHC15Q96MV8 337 aa5.9□□□□□ -1.46
R3HDM1-203ENST00000409606 CEP126Q9P2H0 1117 aa5.9□□□□□ -1.46
R3HDM1-203ENST00000409606 TIMM10P62072 90 aa5.9□□□□□ -1.46
R3HDM1-203ENST00000409606 COL13A1Q5TAT6 717 aaPredicted RBP5.9□□□□□ -1.46
R3HDM1-203ENST00000409606 ZNF589Q86UQ0 364 aaPredicted RBP5.9□□□□□ -1.46
R3HDM1-203ENST00000409606 SUPT20HQ8NEM7 779 aa5.9□□□□□ -1.46
R3HDM1-203ENST00000409606 UBE2Q2Q8WVN8 375 aa5.9□□□□□ -1.46
R3HDM1-203ENST00000409606 OSBP2Q969R2 916 aa5.9□□□□□ -1.46
R3HDM1-203ENST00000409606 SERPINA10Q9UK55 444 aa5.9□□□□□ -1.46
R3HDM1-203ENST00000409606 PALD1Q9ULE6 856 aa5.9□□□□□ -1.46
R3HDM1-203ENST00000409606 DPEP1P16444 411 aa5.9□□□□□ -1.47
R3HDM1-203ENST00000409606 ST3GAL1Q11201 340 aa5.9□□□□□ -1.47
R3HDM1-203ENST00000409606 PITPNM2Q9BZ72 1349 aa5.9□□□□□ -1.47
R3HDM1-203ENST00000409606 PLXNA1Q9UIW2 1896 aa5.9□□□□□ -1.47
R3HDM1-203ENST00000409606 ZAP70P43403 619 aa5.89□□□□□ -1.47
R3HDM1-203ENST00000409606 PDE4CQ08493 712 aa5.89□□□□□ -1.47
R3HDM1-203ENST00000409606 MAP3K14Q99558 947 aa5.89□□□□□ -1.47
R3HDM1-203ENST00000409606 DOCK5Q9H7D0 1870 aa5.89□□□□□ -1.47
R3HDM1-203ENST00000409606 GSG1L2A8MUP6 293 aa5.89□□□□□ -1.47
R3HDM1-203ENST00000409606 TBC1D12O60347 775 aa5.89□□□□□ -1.47
R3HDM1-203ENST00000409606 PHF14O94880 888 aa5.89□□□□□ -1.47
R3HDM1-203ENST00000409606 PDE6AP16499 860 aa5.89□□□□□ -1.47
R3HDM1-203ENST00000409606 MAP2K1Q02750 393 aaPredicted RBP5.89□□□□□ -1.47
R3HDM1-203ENST00000409606 GRIK5Q16478 980 aa5.89□□□□□ -1.47
R3HDM1-203ENST00000409606 MCMDC2Q4G0Z9 681 aa5.89□□□□□ -1.47
R3HDM1-203ENST00000409606 C2CD5Q86YS7 1000 aa5.89□□□□□ -1.47
R3HDM1-203ENST00000409606 MB21D2Q8IYB1 491 aaPredicted RBP5.89□□□□□ -1.47
R3HDM1-203ENST00000409606 AGBL3Q8NEM8 1001 aa5.89□□□□□ -1.47
R3HDM1-203ENST00000409606 NKX2-3Q8TAU0 364 aa5.89□□□□□ -1.47
R3HDM1-203ENST00000409606 STAG1Q8WVM7 1258 aa5.89□□□□□ -1.47
R3HDM1-203ENST00000409606 GPATCH3Q96I76 525 aa5.89□□□□□ -1.47
R3HDM1-203ENST00000409606 PKNOX2Q96KN3 472 aa5.89□□□□□ -1.47
R3HDM1-203ENST00000409606 IL1RAPL2Q9NP60 686 aa5.89□□□□□ -1.47
R3HDM1-203ENST00000409606 ORC4O43929 436 aa5.89□□□□□ -1.47
R3HDM1-203ENST00000409606 NMIQ13287 307 aaPredicted RBP5.89□□□□□ -1.47
R3HDM1-203ENST00000409606 METTL24Q5JXM2 366 aa5.89□□□□□ -1.47
R3HDM1-203ENST00000409606 TBC1D22AQ8WUA7 517 aa5.89□□□□□ -1.47
R3HDM1-203ENST00000409606 H0YIN7 160 aa5.88□□□□□ -1.47
R3HDM1-203ENST00000409606 RPS12P25398 132 aaKnown RBP5.88□□□□□ -1.47
R3HDM1-203ENST00000409606 BCAMP50895 628 aa5.88□□□□□ -1.47
R3HDM1-203ENST00000409606 PTH1RQ03431 593 aa5.88□□□□□ -1.47
R3HDM1-203ENST00000409606 APOBEC3HQ6NTF7 200 aaKnown RBP5.88□□□□□ -1.47
R3HDM1-203ENST00000409606 ZGPATQ8N5A5 531 aaKnown RBP5.88□□□□□ -1.47
R3HDM1-203ENST00000409606 NLGN2Q8NFZ4 835 aa5.88□□□□□ -1.47
R3HDM1-203ENST00000409606 WDR66Q8TBY9 1149 aa5.88□□□□□ -1.47
R3HDM1-203ENST00000409606 PUS7LQ9H0K6 701 aaKnown RBP5.88□□□□□ -1.47
R3HDM1-203ENST00000409606 GGA1Q9UJY5 639 aa5.88□□□□□ -1.47
R3HDM1-203ENST00000409606 KIAA1217Q5T5P2 1943 aa5.88□□□□□ -1.47
R3HDM1-203ENST00000409606 CASP8AP2Q9UKL3 1982 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms