RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 MFSD14BQ5SR56 506 aa20.26■□□□□ 0.83
SSB-202ENST00000409333 LARGE2Q8N3Y3 721 aa20.26■□□□□ 0.83
SSB-202ENST00000409333 USP26Q9BXU7 913 aa20.26■□□□□ 0.83
SSB-202ENST00000409333 YDJCA8MPS7 323 aa20.26■□□□□ 0.83
SSB-202ENST00000409333 RASSF7Q02833 373 aa20.26■□□□□ 0.83
SSB-202ENST00000409333 MECOMQ03112 1051 aa20.26■□□□□ 0.83
SSB-202ENST00000409333 TTLL5Q6EMB2 1281 aa20.26■□□□□ 0.83
SSB-202ENST00000409333 ADGRA1Q86SQ6 560 aa20.26■□□□□ 0.83
SSB-202ENST00000409333 NSUN4Q96CB9 384 aaKnown RBP20.26■□□□□ 0.83
SSB-202ENST00000409333 LSG1Q9H089 658 aaKnown RBP20.26■□□□□ 0.83
SSB-202ENST00000409333 CCDC171Q6TFL3 1326 aa20.25■□□□□ 0.83
SSB-202ENST00000409333 LDHBP07195 334 aaKnown RBP20.25■□□□□ 0.83
SSB-202ENST00000409333 SPTY2D1Q68D10 685 aaPredicted RBP20.25■□□□□ 0.83
SSB-202ENST00000409333 MXD3Q9BW11 206 aa20.25■□□□□ 0.83
SSB-202ENST00000409333 C22orf23Q9BZE7 217 aa20.25■□□□□ 0.83
SSB-202ENST00000409333 CYP7A1P22680 504 aa20.24■□□□□ 0.83
SSB-202ENST00000409333 PTH1RQ03431 593 aa20.24■□□□□ 0.83
SSB-202ENST00000409333 CERS5Q8N5B7 392 aa20.24■□□□□ 0.83
SSB-202ENST00000409333 TBC1D22AQ8WUA7 517 aa20.24■□□□□ 0.83
SSB-202ENST00000409333 TBC1D32Q96NH3 1257 aa20.24■□□□□ 0.83
SSB-202ENST00000409333 VPS33BQ9H267 617 aa20.24■□□□□ 0.83
SSB-202ENST00000409333 LTBP3Q9NS15 1303 aa20.24■□□□□ 0.83
SSB-202ENST00000409333 NAA16Q6N069 864 aaPredicted RBP20.23■□□□□ 0.83
SSB-202ENST00000409333 KIAA1211Q6ZU35 1233 aa20.23■□□□□ 0.83
SSB-202ENST00000409333 BAZ2AQ9UIF9 1905 aaKnown RBP20.23■□□□□ 0.83
SSB-202ENST00000409333 ECM29Q5VYK3 1845 aa20.23■□□□□ 0.83
SSB-202ENST00000409333 PRELPP51888 382 aa20.23■□□□□ 0.83
SSB-202ENST00000409333 DZIP1Q86YF9 867 aaKnown RBP20.23■□□□□ 0.83
SSB-202ENST00000409333 RBM19Q9Y4C8 960 aaKnown RBP20.23■□□□□ 0.83
SSB-202ENST00000409333 LAMA4Q16363 1823 aa20.22■□□□□ 0.83
SSB-202ENST00000409333 GPAA1O43292 621 aa20.22■□□□□ 0.83
SSB-202ENST00000409333 MIGA1Q8NAN2 632 aa20.22■□□□□ 0.83
SSB-202ENST00000409333 FOCADQ5VW36 1801 aa20.21■□□□□ 0.83
SSB-202ENST00000409333 DACT2Q5SW24 774 aa20.21■□□□□ 0.83
SSB-202ENST00000409333 VPS53Q5VIR6 699 aa20.21■□□□□ 0.83
SSB-202ENST00000409333 STRIP1Q5VSL9 837 aa20.21■□□□□ 0.83
SSB-202ENST00000409333 TIAM2Q8IVF5 1701 aa20.21■□□□□ 0.83
SSB-202ENST00000409333 USP17L3A6NCW0 530 aa20.21■□□□□ 0.83
SSB-202ENST00000409333 USP17L4A6NCW7 530 aa20.21■□□□□ 0.83
SSB-202ENST00000409333 MBD4O95243 580 aa20.21■□□□□ 0.83
SSB-202ENST00000409333 YBX3P16989 372 aaKnown RBP eCLIP20.21■□□□□ 0.83
SSB-202ENST00000409333 DIXDC1Q155Q3 683 aa20.21■□□□□ 0.83
SSB-202ENST00000409333 USP17L1Q7RTZ2 530 aa20.21■□□□□ 0.83
SSB-202ENST00000409333 NIM1KQ8IY84 436 aa20.21■□□□□ 0.83
SSB-202ENST00000409333 AIDAQ96BJ3 306 aa20.21■□□□□ 0.83
SSB-202ENST00000409333 RBM25P49756 843 aaKnown RBP20.2■□□□□ 0.82
SSB-202ENST00000409333 F8W031 263 aaPredicted RBP20.19■□□□□ 0.82
SSB-202ENST00000409333 ARHGAP27Q6ZUM4 889 aa20.19■□□□□ 0.82
SSB-202ENST00000409333 LCORLQ8N3X6 602 aa20.19■□□□□ 0.82
SSB-202ENST00000409333 MAP4K1Q92918 833 aa20.19■□□□□ 0.82
SSB-202ENST00000409333 ARMT1Q9H993 441 aa20.19■□□□□ 0.82
SSB-202ENST00000409333 NAV1Q8NEY1 1877 aa20.19■□□□□ 0.82
SSB-202ENST00000409333 FOXP2O15409 715 aa20.18■□□□□ 0.82
SSB-202ENST00000409333 EPB41L2O43491 1005 aaKnown RBP20.18■□□□□ 0.82
SSB-202ENST00000409333 IGSF3O75054 1194 aa20.18■□□□□ 0.82
SSB-202ENST00000409333 HSPD1P10809 573 aaKnown RBP20.18■□□□□ 0.82
SSB-202ENST00000409333 STRBPQ96SI9 672 aaKnown RBP20.18■□□□□ 0.82
SSB-202ENST00000409333 ZNRF3Q9ULT6 936 aa20.18■□□□□ 0.82
SSB-202ENST00000409333 MAGEB6P1A0A0J9YX57 407 aa20.18■□□□□ 0.82
SSB-202ENST00000409333 RAD17O75943 681 aa20.18■□□□□ 0.82
SSB-202ENST00000409333 FKBP1AP62942 108 aaKnown RBP20.18■□□□□ 0.82
SSB-202ENST00000409333 JDP2Q8WYK2 163 aa20.18■□□□□ 0.82
SSB-202ENST00000409333 RIOK1Q9BRS2 568 aaKnown RBP20.18■□□□□ 0.82
SSB-202ENST00000409333 SUGT1Q9Y2Z0 365 aa20.18■□□□□ 0.82
SSB-202ENST00000409333 RBM8AQ9Y5S9 174 aaKnown RBP20.18■□□□□ 0.82
SSB-202ENST00000409333 DYNLL1P63167 89 aaKnown RBP20.17■□□□□ 0.82
SSB-202ENST00000409333 TMED8Q6PL24 325 aaPredicted RBP20.17■□□□□ 0.82
SSB-202ENST00000409333 AATFQ9NY61 560 aaKnown RBP eCLIP20.17■□□□□ 0.82
SSB-202ENST00000409333 PALD1Q9ULE6 856 aa20.17■□□□□ 0.82
SSB-202ENST00000409333 TTF2Q9UNY4 1162 aaKnown RBP20.17■□□□□ 0.82
SSB-202ENST00000409333 MROH7-TTC4A0A0A0MT08 1334 aa20.17■□□□□ 0.82
SSB-202ENST00000409333 LAMB1P07942 1786 aa20.17■□□□□ 0.82
SSB-202ENST00000409333 PSMD14O00487 310 aa20.16■□□□□ 0.82
SSB-202ENST00000409333 HSPA4P34932 840 aa20.16■□□□□ 0.82
SSB-202ENST00000409333 GSTO1P78417 241 aa20.16■□□□□ 0.82
SSB-202ENST00000409333 DSCC1Q9BVC3 393 aa20.16■□□□□ 0.82
SSB-202ENST00000409333 KIAA0825Q8IV33 1275 aa20.16■□□□□ 0.82
SSB-202ENST00000409333 MYH1P12882 1939 aa20.15■□□□□ 0.82
SSB-202ENST00000409333 GAKO14976 1311 aa20.14■□□□□ 0.81
SSB-202ENST00000409333 PRKAB2O43741 272 aa20.14■□□□□ 0.81
SSB-202ENST00000409333 LDHCP07864 332 aa20.14■□□□□ 0.81
SSB-202ENST00000409333 MCCP23508 829 aa20.14■□□□□ 0.81
SSB-202ENST00000409333 SCNN1DP51172 638 aa20.14■□□□□ 0.81
SSB-202ENST00000409333 CXCL9Q07325 125 aa20.14■□□□□ 0.81
SSB-202ENST00000409333 NECTIN1Q15223 517 aa20.14■□□□□ 0.81
SSB-202ENST00000409333 RSBN1LQ6PCB5 846 aaPredicted RBP20.14■□□□□ 0.81
SSB-202ENST00000409333 KIF2CQ99661 725 aa20.14■□□□□ 0.81
SSB-202ENST00000409333 VIL1P09327 827 aaKnown RBP20.13■□□□□ 0.81
SSB-202ENST00000409333 DAGLAQ9Y4D2 1042 aa20.13■□□□□ 0.81
SSB-202ENST00000409333 SLC4A4Q9Y6R1 1079 aa20.13■□□□□ 0.81
SSB-202ENST00000409333 U3KPZ7 1027 aaPredicted RBP20.13■□□□□ 0.81
SSB-202ENST00000409333 DDX60LQ5H9U9 1706 aaKnown RBP20.13■□□□□ 0.81
SSB-202ENST00000409333 SLF2Q8IX21 1173 aa20.13■□□□□ 0.81
SSB-202ENST00000409333 SDR42E1Q8WUS8 393 aa20.13■□□□□ 0.81
SSB-202ENST00000409333 EPB41L4AQ9HCS5 686 aaPredicted RBP20.13■□□□□ 0.81
SSB-202ENST00000409333 MYO3BQ8WXR4 1341 aa20.12■□□□□ 0.81
SSB-202ENST00000409333 APPP05067 770 aa20.12■□□□□ 0.81
SSB-202ENST00000409333 LMNB1P20700 586 aa20.12■□□□□ 0.81
SSB-202ENST00000409333 BTDP43251 543 aa20.12■□□□□ 0.81
SSB-202ENST00000409333 CREB3L3Q68CJ9 461 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms