RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 KSR2Q6VAB6 950 aa9.9□□□□□ -0.82
LSM5-202ENST00000409292 MYH16Q9H6N6 1097 aa9.9□□□□□ -0.82
LSM5-202ENST00000409292 ANGEL1Q9UNK9 670 aaKnown RBP9.9□□□□□ -0.82
LSM5-202ENST00000409292 MINPP1Q9UNW1 487 aa9.9□□□□□ -0.82
LSM5-202ENST00000409292 ADAMTS8Q9UP79 889 aa9.9□□□□□ -0.82
LSM5-202ENST00000409292 MAP3K2Q9Y2U5 619 aa9.9□□□□□ -0.82
LSM5-202ENST00000409292 PPP2R3BQ9Y5P8 575 aa9.9□□□□□ -0.82
LSM5-202ENST00000409292 UNCXA6NJT0 531 aa9.89□□□□□ -0.83
LSM5-202ENST00000409292 WNT10BO00744 389 aa9.89□□□□□ -0.83
LSM5-202ENST00000409292 PRKG1Q13976 671 aa9.89□□□□□ -0.83
LSM5-202ENST00000409292 DACT2Q5SW24 774 aa9.89□□□□□ -0.83
LSM5-202ENST00000409292 MOB2Q70IA6 237 aa9.89□□□□□ -0.83
LSM5-202ENST00000409292 ERO1AQ96HE7 468 aa9.89□□□□□ -0.83
LSM5-202ENST00000409292 LARP6Q9BRS8 491 aaKnown RBP9.89□□□□□ -0.83
LSM5-202ENST00000409292 CFHR5Q9BXR6 569 aa9.89□□□□□ -0.83
LSM5-202ENST00000409292 ZNF804BA4D1E1 1349 aa9.88□□□□□ -0.83
LSM5-202ENST00000409292 COL1A1P02452 1464 aaPredicted RBP9.88□□□□□ -0.83
LSM5-202ENST00000409292 PI4KAP2A4QPH2 592 aa9.88□□□□□ -0.83
LSM5-202ENST00000409292 ARHGAP33O14559 1287 aa9.88□□□□□ -0.83
LSM5-202ENST00000409292 SASH1O94885 1247 aa9.88□□□□□ -0.83
LSM5-202ENST00000409292 ZBTB48P10074 688 aaPredicted RBP9.88□□□□□ -0.83
LSM5-202ENST00000409292 IREB2P48200 963 aaKnown RBP9.88□□□□□ -0.83
LSM5-202ENST00000409292 DDX10Q13206 875 aaKnown RBP9.88□□□□□ -0.83
LSM5-202ENST00000409292 MFSD10Q14728 455 aa9.88□□□□□ -0.83
LSM5-202ENST00000409292 PRAMEF18Q5VWM3 479 aa9.88□□□□□ -0.83
LSM5-202ENST00000409292 KIAA0825Q8IV33 1275 aa9.88□□□□□ -0.83
LSM5-202ENST00000409292 PI4KAP1Q8N8J0 262 aa9.88□□□□□ -0.83
LSM5-202ENST00000409292 TTLL11Q8NHH1 800 aa9.88□□□□□ -0.83
LSM5-202ENST00000409292 JARID2Q92833 1246 aaPredicted RBP9.88□□□□□ -0.83
LSM5-202ENST00000409292 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.88□□□□□ -0.83
LSM5-202ENST00000409292 TRIM17Q9Y577 477 aa9.88□□□□□ -0.83
LSM5-202ENST00000409292 SCN9AQ15858 1988 aa9.87□□□□□ -0.83
LSM5-202ENST00000409292 APAF1O14727 1248 aa9.87□□□□□ -0.83
LSM5-202ENST00000409292 ZNF853P0CG23 659 aa9.87□□□□□ -0.83
LSM5-202ENST00000409292 GTF2IP78347 998 aa9.87□□□□□ -0.83
LSM5-202ENST00000409292 PTPN12Q05209 780 aaKnown RBP9.87□□□□□ -0.83
LSM5-202ENST00000409292 TNFAIP1Q13829 316 aa9.87□□□□□ -0.83
LSM5-202ENST00000409292 SPRYD7Q5W111 196 aa9.87□□□□□ -0.83
LSM5-202ENST00000409292 ZNF804AQ7Z570 1209 aa9.87□□□□□ -0.83
LSM5-202ENST00000409292 DEFB129Q9H1M3 183 aa9.87□□□□□ -0.83
LSM5-202ENST00000409292 GREM2Q9H772 168 aa9.87□□□□□ -0.83
LSM5-202ENST00000409292 ANKRD18BA2A2Z9 1011 aa9.86□□□□□ -0.83
LSM5-202ENST00000409292 ITGA6P23229 1130 aa9.86□□□□□ -0.83
LSM5-202ENST00000409292 RBM5P52756 815 aaKnown RBP eCLIP9.86□□□□□ -0.83
LSM5-202ENST00000409292 TAF7LQ5H9L4 462 aa9.86□□□□□ -0.83
LSM5-202ENST00000409292 UBE3BQ7Z3V4 1068 aa9.86□□□□□ -0.83
LSM5-202ENST00000409292 SCAF8Q9UPN6 1271 aaKnown RBP9.86□□□□□ -0.83
LSM5-202ENST00000409292 PSME4Q14997 1843 aa9.85□□□□□ -0.83
LSM5-202ENST00000409292 NEURL1BA8MQ27 555 aa9.85□□□□□ -0.83
LSM5-202ENST00000409292 LDLRAD1Q5T700 205 aa9.85□□□□□ -0.83
LSM5-202ENST00000409292 POTEEQ6S8J3 1075 aa9.85□□□□□ -0.83
LSM5-202ENST00000409292 NBPF11Q86T75 865 aa9.85□□□□□ -0.83
LSM5-202ENST00000409292 ANKRD13AQ8IZ07 590 aa9.85□□□□□ -0.83
LSM5-202ENST00000409292 C8orf58Q8NAV2 365 aa9.85□□□□□ -0.83
LSM5-202ENST00000409292 MXD3Q9BW11 206 aa9.85□□□□□ -0.83
LSM5-202ENST00000409292 VEZTQ9HBM0 779 aa9.85□□□□□ -0.83
LSM5-202ENST00000409292 TNNI2P48788 182 aa9.84□□□□□ -0.83
LSM5-202ENST00000409292 IFIT5Q13325 482 aaKnown RBP9.84□□□□□ -0.83
LSM5-202ENST00000409292 FKBP5Q13451 457 aaPredicted RBP9.84□□□□□ -0.83
LSM5-202ENST00000409292 MAP3K11Q16584 847 aa9.84□□□□□ -0.83
LSM5-202ENST00000409292 MTMR14Q8NCE2 650 aa9.84□□□□□ -0.83
LSM5-202ENST00000409292 PLA2G12BQ9BX93 195 aa9.84□□□□□ -0.83
LSM5-202ENST00000409292 EFCC1Q9HA90 598 aa9.84□□□□□ -0.83
LSM5-202ENST00000409292 CD209Q9NNX6 404 aa9.84□□□□□ -0.83
LSM5-202ENST00000409292 CHMP3Q9Y3E7 222 aa9.84□□□□□ -0.83
LSM5-202ENST00000409292 F8W031 263 aaPredicted RBP9.83□□□□□ -0.84
LSM5-202ENST00000409292 H7C1W4 665 aa9.83□□□□□ -0.84
LSM5-202ENST00000409292 IGKV5-2P06315 115 aa9.83□□□□□ -0.84
LSM5-202ENST00000409292 FKBP1AP62942 108 aaKnown RBP9.83□□□□□ -0.84
LSM5-202ENST00000409292 SP3Q02447 781 aa9.83□□□□□ -0.84
LSM5-202ENST00000409292 CHRNDQ07001 517 aa9.83□□□□□ -0.84
LSM5-202ENST00000409292 GCKRQ14397 625 aa9.83□□□□□ -0.84
LSM5-202ENST00000409292 CCDC57Q2TAC2 916 aa9.83□□□□□ -0.84
LSM5-202ENST00000409292 CWF19L2Q2TBE0 894 aaKnown RBP9.83□□□□□ -0.84
LSM5-202ENST00000409292 TWISTNBQ3B726 338 aaPredicted RBP9.83□□□□□ -0.84
LSM5-202ENST00000409292 OTOP1Q7RTM1 612 aa9.83□□□□□ -0.84
LSM5-202ENST00000409292 LINS1Q8NG48 757 aa9.83□□□□□ -0.84
LSM5-202ENST00000409292 WNK4Q96J92 1243 aa9.83□□□□□ -0.84
LSM5-202ENST00000409292 TK2O00142 265 aa9.82□□□□□ -0.84
LSM5-202ENST00000409292 KIF22Q14807 665 aa9.82□□□□□ -0.84
LSM5-202ENST00000409292 CFAP100Q494V2 611 aa9.82□□□□□ -0.84
LSM5-202ENST00000409292 DNAAF4Q8WXU2 420 aa9.82□□□□□ -0.84
LSM5-202ENST00000409292 HOOK2Q96ED9 719 aa9.82□□□□□ -0.84
LSM5-202ENST00000409292 ZFYVE28Q9HCC9 887 aa9.82□□□□□ -0.84
LSM5-202ENST00000409292 CNNM1Q9NRU3 951 aa9.82□□□□□ -0.84
LSM5-202ENST00000409292 PTPN22Q9Y2R2 807 aa9.82□□□□□ -0.84
LSM5-202ENST00000409292 CSADQ9Y600 493 aa9.82□□□□□ -0.84
LSM5-202ENST00000409292 MYH3P11055 1940 aa9.82□□□□□ -0.84
LSM5-202ENST00000409292 COL4A1P02462 1669 aa9.81□□□□□ -0.84
LSM5-202ENST00000409292 CLRN2A0PK11 232 aa9.81□□□□□ -0.84
LSM5-202ENST00000409292 CSF1RP07333 972 aa9.81□□□□□ -0.84
LSM5-202ENST00000409292 FLIIQ13045 1269 aa9.81□□□□□ -0.84
LSM5-202ENST00000409292 SLC4A8Q2Y0W8 1093 aa9.81□□□□□ -0.84
LSM5-202ENST00000409292 C15orf52Q6ZUT6 534 aaKnown RBP9.81□□□□□ -0.84
LSM5-202ENST00000409292 TXNRD3Q86VQ6 643 aa9.81□□□□□ -0.84
LSM5-202ENST00000409292 ZBED3Q96IU2 234 aaPredicted RBP9.81□□□□□ -0.84
LSM5-202ENST00000409292 PRKRIP1Q9H875 184 aaPredicted RBP9.81□□□□□ -0.84
LSM5-202ENST00000409292 RTN4Q9NQC3 1192 aaKnown RBP9.81□□□□□ -0.84
LSM5-202ENST00000409292 TMOD2Q9NZR1 351 aa9.81□□□□□ -0.84
LSM5-202ENST00000409292 EVI5O60447 810 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms