RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 GMLQ99445 158 aa24.78■■□□□ 1.56
VSX1-203ENST00000409285 MAST3O60307 1309 aa24.78■■□□□ 1.56
VSX1-203ENST00000409285 ZNF541Q9H0D2 1346 aa24.78■■□□□ 1.56
VSX1-203ENST00000409285 IDH1O75874 414 aaKnown RBP24.77■■□□□ 1.56
VSX1-203ENST00000409285 RPS12P25398 132 aaKnown RBP24.77■■□□□ 1.56
VSX1-203ENST00000409285 MMP14P50281 582 aa24.77■■□□□ 1.56
VSX1-203ENST00000409285 ZSCAN25Q6NSZ9 544 aa24.77■■□□□ 1.56
VSX1-203ENST00000409285 HIP1O00291 1037 aa24.77■■□□□ 1.56
VSX1-203ENST00000409285 GPC2Q8N158 579 aa24.77■■□□□ 1.56
VSX1-203ENST00000409285 NSUN4Q96CB9 384 aaKnown RBP24.77■■□□□ 1.56
VSX1-203ENST00000409285 WDR90Q96KV7 1748 aa24.76■■□□□ 1.55
VSX1-203ENST00000409285 ADD2P35612 726 aa24.76■■□□□ 1.55
VSX1-203ENST00000409285 PDE6AP16499 860 aa24.75■■□□□ 1.55
VSX1-203ENST00000409285 MECOMQ03112 1051 aa24.75■■□□□ 1.55
VSX1-203ENST00000409285 UBE3CQ15386 1083 aa24.75■■□□□ 1.55
VSX1-203ENST00000409285 GRIK5Q16478 980 aa24.75■■□□□ 1.55
VSX1-203ENST00000409285 SLC9C2Q5TAH2 1124 aa24.75■■□□□ 1.55
VSX1-203ENST00000409285 ZNF384Q8TF68 577 aa24.75■■□□□ 1.55
VSX1-203ENST00000409285 MXD3Q9BW11 206 aa24.75■■□□□ 1.55
VSX1-203ENST00000409285 MRIQ9BWK5 157 aa24.75■■□□□ 1.55
VSX1-203ENST00000409285 RAI14Q9P0K7 980 aa24.75■■□□□ 1.55
VSX1-203ENST00000409285 TCRBV5S4A2TA0A5A2 114 aa24.74■■□□□ 1.55
VSX1-203ENST00000409285 HDLBPQ00341 1268 aaKnown RBP24.74■■□□□ 1.55
VSX1-203ENST00000409285 DZIP1Q86YF9 867 aaKnown RBP24.74■■□□□ 1.55
VSX1-203ENST00000409285 DPF2Q92785 391 aa24.74■■□□□ 1.55
VSX1-203ENST00000409285 RNF113AO15541 343 aaKnown RBP24.73■■□□□ 1.55
VSX1-203ENST00000409285 CDC45O75419 566 aa24.73■■□□□ 1.55
VSX1-203ENST00000409285 GSTO1P78417 241 aa24.73■■□□□ 1.55
VSX1-203ENST00000409285 SLF2Q8IX21 1173 aa24.72■■□□□ 1.55
VSX1-203ENST00000409285 MAGEB6Q8N7X4 407 aa24.72■■□□□ 1.55
VSX1-203ENST00000409285 FAM163AQ96GL9 167 aaPredicted RBP24.72■■□□□ 1.55
VSX1-203ENST00000409285 TTF2Q9UNY4 1162 aaKnown RBP24.72■■□□□ 1.55
VSX1-203ENST00000409285 CHMLP26374 656 aa24.71■■□□□ 1.55
VSX1-203ENST00000409285 NAA16Q6N069 864 aaPredicted RBP24.71■■□□□ 1.55
VSX1-203ENST00000409285 KIAA0825Q8IV33 1275 aa24.71■■□□□ 1.55
VSX1-203ENST00000409285 SERPINA10Q9UK55 444 aa24.71■■□□□ 1.55
VSX1-203ENST00000409285 GAKO14976 1311 aa24.71■■□□□ 1.55
VSX1-203ENST00000409285 ZMYM1Q5SVZ6 1142 aa24.7■■□□□ 1.55
VSX1-203ENST00000409285 HHIPL2Q6UWX4 724 aa24.7■■□□□ 1.55
VSX1-203ENST00000409285 APPBP2Q92624 585 aa24.7■■□□□ 1.55
VSX1-203ENST00000409285 DIAPH3Q9NSV4 1193 aa24.7■■□□□ 1.55
VSX1-203ENST00000409285 ZBTB12Q9Y330 459 aaPredicted RBP24.7■■□□□ 1.55
VSX1-203ENST00000409285 ZNF532Q9HCE3 1301 aa24.7■■□□□ 1.55
VSX1-203ENST00000409285 USP17L8P0C7I0 530 aa24.7■■□□□ 1.54
VSX1-203ENST00000409285 MROH7-TTC4A0A0A0MT08 1334 aa24.7■■□□□ 1.54
VSX1-203ENST00000409285 RAD50Q92878 1312 aa24.7■■□□□ 1.54
VSX1-203ENST00000409285 LDHCP07864 332 aa24.69■■□□□ 1.54
VSX1-203ENST00000409285 GMPSP49915 693 aaPredicted RBP24.69■■□□□ 1.54
VSX1-203ENST00000409285 ZNF280AP59817 542 aaPredicted RBP24.69■■□□□ 1.54
VSX1-203ENST00000409285 DPY19L2Q6NUT2 758 aa24.69■■□□□ 1.54
VSX1-203ENST00000409285 CASC1Q6TDU7 716 aa24.69■■□□□ 1.54
VSX1-203ENST00000409285 OGFOD1Q8N543 542 aa24.69■■□□□ 1.54
VSX1-203ENST00000409285 HELLSQ9NRZ9 838 aa24.69■■□□□ 1.54
VSX1-203ENST00000409285 GJA3Q9Y6H8 435 aa24.69■■□□□ 1.54
VSX1-203ENST00000409285 NAV1Q8NEY1 1877 aa24.68■■□□□ 1.54
VSX1-203ENST00000409285 DIXDC1Q155Q3 683 aa24.68■■□□□ 1.54
VSX1-203ENST00000409285 TEKT1Q969V4 418 aa24.68■■□□□ 1.54
VSX1-203ENST00000409285 L3MBTL3Q96JM7 780 aaPredicted RBP24.68■■□□□ 1.54
VSX1-203ENST00000409285 HDAC9Q9UKV0 1011 aa24.68■■□□□ 1.54
VSX1-203ENST00000409285 GLTPD2A6NH11 291 aa24.67■■□□□ 1.54
VSX1-203ENST00000409285 F8W031 263 aaPredicted RBP24.67■■□□□ 1.54
VSX1-203ENST00000409285 CHGBP05060 677 aa24.67■■□□□ 1.54
VSX1-203ENST00000409285 CYP7A1P22680 504 aa24.67■■□□□ 1.54
VSX1-203ENST00000409285 SCNN1DP51172 638 aa24.67■■□□□ 1.54
VSX1-203ENST00000409285 ADGRA1Q86SQ6 560 aa24.67■■□□□ 1.54
VSX1-203ENST00000409285 CERS3Q8IU89 383 aa24.67■■□□□ 1.54
VSX1-203ENST00000409285 ZNF784Q8NCA9 323 aaPredicted RBP24.67■■□□□ 1.54
VSX1-203ENST00000409285 MTMR14Q8NCE2 650 aa24.67■■□□□ 1.54
VSX1-203ENST00000409285 ZDHHC15Q96MV8 337 aa24.67■■□□□ 1.54
VSX1-203ENST00000409285 DDX60LQ5H9U9 1706 aaKnown RBP24.67■■□□□ 1.54
VSX1-203ENST00000409285 A0A0D9SFI3 127 aa24.66■■□□□ 1.54
VSX1-203ENST00000409285 NMIQ13287 307 aaPredicted RBP24.66■■□□□ 1.54
VSX1-203ENST00000409285 RUFY2Q8WXA3 655 aa24.66■■□□□ 1.54
VSX1-203ENST00000409285 FAM227BQ96M60 508 aa24.66■■□□□ 1.54
VSX1-203ENST00000409285 GPRC5DQ9NZD1 345 aa24.66■■□□□ 1.54
VSX1-203ENST00000409285 LAMA4Q16363 1823 aa24.66■■□□□ 1.54
VSX1-203ENST00000409285 BAZ2AQ9UIF9 1905 aaKnown RBP24.65■■□□□ 1.54
VSX1-203ENST00000409285 GPR75-ASB3A0A0A6YYF3 556 aa24.65■■□□□ 1.54
VSX1-203ENST00000409285 CRKP46108 304 aa24.65■■□□□ 1.54
VSX1-203ENST00000409285 OSBP2Q969R2 916 aa24.65■■□□□ 1.54
VSX1-203ENST00000409285 DAGLAQ9Y4D2 1042 aa24.65■■□□□ 1.54
VSX1-203ENST00000409285 MYH1P12882 1939 aa24.65■■□□□ 1.54
VSX1-203ENST00000409285 DDNO94850 711 aaPredicted RBP24.64■■□□□ 1.54
VSX1-203ENST00000409285 PPP4CP60510 307 aa24.64■■□□□ 1.54
VSX1-203ENST00000409285 SLFNL1Q499Z3 407 aa24.64■■□□□ 1.54
VSX1-203ENST00000409285 MCMDC2Q4G0Z9 681 aa24.64■■□□□ 1.54
VSX1-203ENST00000409285 CWC27Q6UX04 472 aaKnown RBP24.64■■□□□ 1.54
VSX1-203ENST00000409285 PUS7LQ9H0K6 701 aaKnown RBP24.64■■□□□ 1.54
VSX1-203ENST00000409285 LAMB1P07942 1786 aa24.64■■□□□ 1.54
VSX1-203ENST00000409285 C8orf34Q49A92 452 aa24.64■■□□□ 1.53
VSX1-203ENST00000409285 RIOK1Q9BRS2 568 aaKnown RBP24.64■■□□□ 1.53
VSX1-203ENST00000409285 CNOT7Q9UIV1 285 aaKnown RBP24.64■■□□□ 1.53
VSX1-203ENST00000409285 SGSM2O43147 1006 aa24.63■■□□□ 1.53
VSX1-203ENST00000409285 MICALL2Q8IY33 904 aa24.63■■□□□ 1.53
VSX1-203ENST00000409285 ZNF526Q8TF50 670 aaPredicted RBP24.63■■□□□ 1.53
VSX1-203ENST00000409285 ZBED3Q96IU2 234 aaPredicted RBP24.63■■□□□ 1.53
VSX1-203ENST00000409285 ESYT1Q9BSJ8 1104 aa24.63■■□□□ 1.53
VSX1-203ENST00000409285 BAG3O95817 575 aa24.62■■□□□ 1.53
VSX1-203ENST00000409285 SEC62Q99442 399 aaKnown RBP24.62■■□□□ 1.53
VSX1-203ENST00000409285 MYOZ2Q9NPC6 264 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms