RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 RAB3GAP1Q15042 981 aa13.62□□□□□ -0.23
SHANK2-203ENST00000409161 PRR16Q569H4 304 aa13.62□□□□□ -0.23
SHANK2-203ENST00000409161 ARHGEF2Q92974 986 aaKnown RBP13.62□□□□□ -0.23
SHANK2-203ENST00000409161 RHOXF2BP0C7M4 288 aa13.62□□□□□ -0.23
SHANK2-203ENST00000409161 RHOXF2Q9BQY4 288 aa13.62□□□□□ -0.23
SHANK2-203ENST00000409161 IGF1RP08069 1367 aa13.62□□□□□ -0.23
SHANK2-203ENST00000409161 FLIIQ13045 1269 aa13.62□□□□□ -0.23
SHANK2-203ENST00000409161 IQUBQ8NA54 791 aa13.62□□□□□ -0.23
SHANK2-203ENST00000409161 PPP1R12CQ9BZL4 782 aa13.62□□□□□ -0.23
SHANK2-203ENST00000409161 MYD88Q99836 296 aa13.61□□□□□ -0.23
SHANK2-203ENST00000409161 PFDN4Q9NQP4 134 aa13.61□□□□□ -0.23
SHANK2-203ENST00000409161 LARSQ9P2J5 1176 aaKnown RBP13.61□□□□□ -0.23
SHANK2-203ENST00000409161 TTC41PQ6P2S7 1318 aa13.61□□□□□ -0.23
SHANK2-203ENST00000409161 CACYBPQ9HB71 228 aaKnown RBP13.61□□□□□ -0.23
SHANK2-203ENST00000409161 DACT1Q9NYF0 836 aa13.61□□□□□ -0.23
SHANK2-203ENST00000409161 SPDYE3A6NKU9 549 aa13.61□□□□□ -0.23
SHANK2-203ENST00000409161 ISM2Q6H9L7 571 aa13.61□□□□□ -0.23
SHANK2-203ENST00000409161 NOX5Q96PH1 765 aa13.61□□□□□ -0.23
SHANK2-203ENST00000409161 PHLDB3Q6NSJ2 640 aa13.61□□□□□ -0.23
SHANK2-203ENST00000409161 LZTFL1Q9NQ48 299 aa13.61□□□□□ -0.23
SHANK2-203ENST00000409161 E7EVH7 732 aa13.6□□□□□ -0.23
SHANK2-203ENST00000409161 LMOD1P29536 600 aaPredicted RBP13.6□□□□□ -0.23
SHANK2-203ENST00000409161 RRS1Q15050 365 aaKnown RBP13.6□□□□□ -0.23
SHANK2-203ENST00000409161 DNAJC25Q9H1X3 360 aa13.6□□□□□ -0.23
SHANK2-203ENST00000409161 SNAPC4Q5SXM2 1469 aa13.6□□□□□ -0.23
SHANK2-203ENST00000409161 EPB41P11171 864 aaKnown RBP13.6□□□□□ -0.23
SHANK2-203ENST00000409161 HPDP32754 393 aaPredicted RBP13.6□□□□□ -0.23
SHANK2-203ENST00000409161 PAK2Q13177 524 aa13.6□□□□□ -0.23
SHANK2-203ENST00000409161 MCMDC2Q4G0Z9 681 aa13.6□□□□□ -0.23
SHANK2-203ENST00000409161 SLC8A3P57103 927 aa13.6□□□□□ -0.23
SHANK2-203ENST00000409161 DENND2CQ68D51 928 aa13.6□□□□□ -0.23
SHANK2-203ENST00000409161 NCOA1Q15788 1441 aa13.6□□□□□ -0.23
SHANK2-203ENST00000409161 NESP48681 1621 aa13.6□□□□□ -0.23
SHANK2-203ENST00000409161 OSCARQ8IYS5 282 aa13.6□□□□□ -0.23
SHANK2-203ENST00000409161 SCAF11Q99590 1463 aaKnown RBP13.6□□□□□ -0.23
SHANK2-203ENST00000409161 KLF18A0A0U1RQI7 1052 aa13.6□□□□□ -0.23
SHANK2-203ENST00000409161 NBPF6Q5VWK0 638 aa13.6□□□□□ -0.23
SHANK2-203ENST00000409161 CNNM4Q6P4Q7 775 aa13.6□□□□□ -0.23
SHANK2-203ENST00000409161 NBPF4Q96M43 638 aa13.6□□□□□ -0.23
SHANK2-203ENST00000409161 AGTPBP1Q9UPW5 1226 aa13.6□□□□□ -0.23
SHANK2-203ENST00000409161 PPFIA4O75335 1185 aa13.59□□□□□ -0.23
SHANK2-203ENST00000409161 MYL5Q02045 173 aa13.59□□□□□ -0.23
SHANK2-203ENST00000409161 MIER3Q7Z3K6 550 aa13.59□□□□□ -0.23
SHANK2-203ENST00000409161 CCDC117Q8IWD4 279 aaPredicted RBP13.59□□□□□ -0.23
SHANK2-203ENST00000409161 GTF3C6Q969F1 213 aa13.59□□□□□ -0.23
SHANK2-203ENST00000409161 PPP1R1BQ9UD71 204 aaPredicted RBP13.59□□□□□ -0.23
SHANK2-203ENST00000409161 MYCBPQ99417 103 aaPredicted RBP13.59□□□□□ -0.23
SHANK2-203ENST00000409161 KDM5AP29375 1690 aaKnown RBP13.59□□□□□ -0.23
SHANK2-203ENST00000409161 NUCKS1Q9H1E3 243 aaKnown RBP13.59□□□□□ -0.23
SHANK2-203ENST00000409161 LIN9Q5TKA1 542 aa13.59□□□□□ -0.23
SHANK2-203ENST00000409161 MYRIPQ8NFW9 859 aa13.59□□□□□ -0.23
SHANK2-203ENST00000409161 RAB17Q9H0T7 212 aa13.59□□□□□ -0.23
SHANK2-203ENST00000409161 KRT79Q5XKE5 535 aa13.59□□□□□ -0.23
SHANK2-203ENST00000409161 SMC5Q8IY18 1101 aa13.59□□□□□ -0.23
SHANK2-203ENST00000409161 PLCG2P16885 1265 aa13.58□□□□□ -0.23
SHANK2-203ENST00000409161 ZNF131P52739 623 aa13.58□□□□□ -0.23
SHANK2-203ENST00000409161 HSP90AA5PQ58FG0 334 aa13.58□□□□□ -0.23
SHANK2-203ENST00000409161 TRMT112Q9UI30 125 aaKnown RBP13.58□□□□□ -0.23
SHANK2-203ENST00000409161 PRIM1P49642 420 aaKnown RBP13.58□□□□□ -0.23
SHANK2-203ENST00000409161 P3H4Q92791 437 aa13.58□□□□□ -0.23
SHANK2-203ENST00000409161 IFNKQ9P0W0 207 aa13.58□□□□□ -0.23
SHANK2-203ENST00000409161 STX10O60499 249 aa13.58□□□□□ -0.24
SHANK2-203ENST00000409161 ARID5AQ03989 594 aa13.58□□□□□ -0.24
SHANK2-203ENST00000409161 DTHD1Q6ZMT9 781 aa13.58□□□□□ -0.24
SHANK2-203ENST00000409161 PPP1R42Q7Z4L9 355 aa13.58□□□□□ -0.24
SHANK2-203ENST00000409161 DDX27Q96GQ7 796 aaKnown RBP13.58□□□□□ -0.24
SHANK2-203ENST00000409161 TMEM110-MUSTN1A8MSY1 372 aa13.58□□□□□ -0.24
SHANK2-203ENST00000409161 CCDC65Q8IXS2 484 aa13.58□□□□□ -0.24
SHANK2-203ENST00000409161 TRIM35Q9UPQ4 493 aa13.58□□□□□ -0.24
SHANK2-203ENST00000409161 GOLGA8QA0A0J9YX86 632 aa13.58□□□□□ -0.24
SHANK2-203ENST00000409161 GOLGA8OA6NCC3 632 aa13.58□□□□□ -0.24
SHANK2-203ENST00000409161 SMIM23A6NLE4 172 aa13.58□□□□□ -0.24
SHANK2-203ENST00000409161 GOLGA8NF8WBI6 632 aa13.58□□□□□ -0.24
SHANK2-203ENST00000409161 PANK2Q9BZ23 570 aa13.58□□□□□ -0.24
SHANK2-203ENST00000409161 CCDC8Q9H0W5 538 aaPredicted RBP13.58□□□□□ -0.24
SHANK2-203ENST00000409161 TLDC2A0PJX2 215 aa13.58□□□□□ -0.24
SHANK2-203ENST00000409161 FAM69CQ0P6D2 419 aa13.58□□□□□ -0.24
SHANK2-203ENST00000409161 CFAP221Q4G0U5 840 aa13.58□□□□□ -0.24
SHANK2-203ENST00000409161 FCHSD1Q86WN1 690 aa13.58□□□□□ -0.24
SHANK2-203ENST00000409161 RRP36Q96EU6 259 aaKnown RBP13.58□□□□□ -0.24
SHANK2-203ENST00000409161 GLT8D2Q9H1C3 349 aa13.58□□□□□ -0.24
SHANK2-203ENST00000409161 RBBP5Q15291 538 aaKnown RBP13.57□□□□□ -0.24
SHANK2-203ENST00000409161 MUM1Q2TAK8 710 aa13.57□□□□□ -0.24
SHANK2-203ENST00000409161 SYT10Q6XYQ8 523 aa13.57□□□□□ -0.24
SHANK2-203ENST00000409161 NAPAP54920 295 aa13.57□□□□□ -0.24
SHANK2-203ENST00000409161 MCM10Q7L590 875 aa13.57□□□□□ -0.24
SHANK2-203ENST00000409161 KIFC2Q96AC6 838 aa13.57□□□□□ -0.24
SHANK2-203ENST00000409161 PHF23Q9BUL5 403 aaPredicted RBP13.57□□□□□ -0.24
SHANK2-203ENST00000409161 PLCD1P51178 756 aa13.57□□□□□ -0.24
SHANK2-203ENST00000409161 WDR44Q5JSH3 913 aa13.57□□□□□ -0.24
SHANK2-203ENST00000409161 HEATR3Q7Z4Q2 680 aa13.57□□□□□ -0.24
SHANK2-203ENST00000409161 ZNF830Q96NB3 372 aaPredicted RBP13.57□□□□□ -0.24
SHANK2-203ENST00000409161 STX8Q9UNK0 236 aa13.57□□□□□ -0.24
SHANK2-203ENST00000409161 AQRO60306 1485 aaKnown RBP eCLIP13.57□□□□□ -0.245e-7■■■■■ 27.6
SHANK2-203ENST00000409161 CABS1Q96KC9 395 aa13.57□□□□□ -0.24
SHANK2-203ENST00000409161 ESYT1Q9BSJ8 1104 aa13.57□□□□□ -0.24
SHANK2-203ENST00000409161 ANKRD36BQ8N2N9 1353 aa13.57□□□□□ -0.24
SHANK2-203ENST00000409161 VSIG1Q86XK7 387 aa13.57□□□□□ -0.24
SHANK2-203ENST00000409161 MAIP1Q8WWC4 291 aa13.57□□□□□ -0.24
SHANK2-203ENST00000409161 FAM204AQ9H8W3 233 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms