RNA–Protein interactions for RNA: ENST00000409080.5

ITGA6-202, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 5,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-202ENST00000409080 BLMP54132 1417 aaPredicted RBP16.13■□□□□ 0.17
ITGA6-202ENST00000409080 PPP2R5BQ15173 497 aa16.13■□□□□ 0.17
ITGA6-202ENST00000409080 TRIM35Q9UPQ4 493 aa16.13■□□□□ 0.17
ITGA6-202ENST00000409080 RBM6P78332 1123 aaKnown RBP16.12■□□□□ 0.17
ITGA6-202ENST00000409080 TFIP11Q9UBB9 837 aaKnown RBP16.12■□□□□ 0.17
ITGA6-202ENST00000409080 TBC1D5Q92609 795 aa16.12■□□□□ 0.17
ITGA6-202ENST00000409080 TRIM47Q96LD4 638 aa16.12■□□□□ 0.17
ITGA6-202ENST00000409080 AFF2P51816 1311 aa16.12■□□□□ 0.17
ITGA6-202ENST00000409080 ERBB3P21860 1342 aa16.12■□□□□ 0.17
ITGA6-202ENST00000409080 PUF60Q9UHX1 559 aaKnown RBP16.12■□□□□ 0.17
ITGA6-202ENST00000409080 USP40Q9NVE5 1235 aa16.12■□□□□ 0.17
ITGA6-202ENST00000409080 KIF2AO00139 706 aaPredicted RBP16.11■□□□□ 0.17
ITGA6-202ENST00000409080 SLC1A4P43007 532 aa16.11■□□□□ 0.17
ITGA6-202ENST00000409080 TMX3Q96JJ7 454 aa16.11■□□□□ 0.17
ITGA6-202ENST00000409080 SYNMO15061 1565 aa16.11■□□□□ 0.17
ITGA6-202ENST00000409080 PPEF1O14829 653 aaPredicted RBP16.11■□□□□ 0.17
ITGA6-202ENST00000409080 IL17REQ8NFR9 667 aa16.11■□□□□ 0.17
ITGA6-202ENST00000409080 CERKQ8TCT0 537 aa16.11■□□□□ 0.17
ITGA6-202ENST00000409080 PANK2Q9BZ23 570 aa16.11■□□□□ 0.17
ITGA6-202ENST00000409080 GPCPD1Q9NPB8 672 aa16.11■□□□□ 0.17
ITGA6-202ENST00000409080 ARPP21Q9UBL0 812 aaPredicted RBP16.11■□□□□ 0.17
ITGA6-202ENST00000409080 ZBTB7BO15156 539 aaPredicted RBP16.11■□□□□ 0.17
ITGA6-202ENST00000409080 HS2ST1Q7LGA3 356 aa16.11■□□□□ 0.17
ITGA6-202ENST00000409080 SPC25Q9HBM1 224 aa16.11■□□□□ 0.17
ITGA6-202ENST00000409080 CLASP1Q7Z460 1538 aa16.11■□□□□ 0.17
ITGA6-202ENST00000409080 TET3O43151 1660 aa16.11■□□□□ 0.17
ITGA6-202ENST00000409080 SERPINB2P05120 415 aa16.11■□□□□ 0.17
ITGA6-202ENST00000409080 ZSCAN22P10073 491 aaPredicted RBP16.11■□□□□ 0.17
ITGA6-202ENST00000409080 SPAG1Q07617 926 aa16.11■□□□□ 0.17
ITGA6-202ENST00000409080 XDHP47989 1333 aa16.11■□□□□ 0.17
ITGA6-202ENST00000409080 SYCE3A1L190 88 aa16.1■□□□□ 0.17
ITGA6-202ENST00000409080 PRKG1Q13976 671 aa16.1■□□□□ 0.17
ITGA6-202ENST00000409080 NECAB1Q8N987 351 aa16.1■□□□□ 0.17
ITGA6-202ENST00000409080 BBOX1O75936 387 aa16.1■□□□□ 0.17
ITGA6-202ENST00000409080 KBTBD3Q8NAB2 608 aa16.1■□□□□ 0.17
ITGA6-202ENST00000409080 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.1■□□□□ 0.17
ITGA6-202ENST00000409080 LEMD3Q9Y2U8 911 aa16.1■□□□□ 0.17
ITGA6-202ENST00000409080 ASIC1P78348 528 aa16.1■□□□□ 0.17
ITGA6-202ENST00000409080 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.1■□□□□ 0.17
ITGA6-202ENST00000409080 IGSF1Q8N6C5 1336 aa16.1■□□□□ 0.17
ITGA6-202ENST00000409080 PSMA7O14818 248 aa16.1■□□□□ 0.17
ITGA6-202ENST00000409080 GPAA1O43292 621 aa16.1■□□□□ 0.17
ITGA6-202ENST00000409080 CTNNA2P26232 953 aa16.1■□□□□ 0.17
ITGA6-202ENST00000409080 BRAPQ7Z569 592 aa16.1■□□□□ 0.17
ITGA6-202ENST00000409080 NOP56O00567 594 aaKnown RBP16.09■□□□□ 0.17
ITGA6-202ENST00000409080 UBE2HP62256 183 aa16.09■□□□□ 0.17
ITGA6-202ENST00000409080 RRAGBQ5VZM2 374 aa16.09■□□□□ 0.17
ITGA6-202ENST00000409080 SMC5Q8IY18 1101 aa16.09■□□□□ 0.17
ITGA6-202ENST00000409080 ERCC6L2Q5T890 1561 aa16.09■□□□□ 0.17
ITGA6-202ENST00000409080 CHURC1Q8WUH1 139 aa16.09■□□□□ 0.17
ITGA6-202ENST00000409080 LRRC45Q96CN5 670 aa16.09■□□□□ 0.17
ITGA6-202ENST00000409080 PPM1FP49593 454 aaPredicted RBP16.09■□□□□ 0.17
ITGA6-202ENST00000409080 GRPEL1Q9HAV7 217 aa16.09■□□□□ 0.17
ITGA6-202ENST00000409080 CHMLP26374 656 aa16.09■□□□□ 0.17
ITGA6-202ENST00000409080 DTHD1Q6ZMT9 781 aa16.09■□□□□ 0.17
ITGA6-202ENST00000409080 FAM177A1Q8N128 213 aaPredicted RBP16.09■□□□□ 0.17
ITGA6-202ENST00000409080 SYNCQ9H7C4 482 aa16.09■□□□□ 0.17
ITGA6-202ENST00000409080 ECM2O94769 699 aaPredicted RBP16.09■□□□□ 0.17
ITGA6-202ENST00000409080 TCP10Q12799 353 aa16.09■□□□□ 0.17
ITGA6-202ENST00000409080 TCEANC2Q96MN5 208 aa16.09■□□□□ 0.17
ITGA6-202ENST00000409080 TBC1D32Q96NH3 1257 aa16.09■□□□□ 0.17
ITGA6-202ENST00000409080 SPATA31E1Q6ZUB1 1445 aa16.08■□□□□ 0.17
ITGA6-202ENST00000409080 CCDC112Q8NEF3 446 aa16.08■□□□□ 0.17
ITGA6-202ENST00000409080 CDC42BPGQ6DT37 1551 aa16.08■□□□□ 0.17
ITGA6-202ENST00000409080 JCADQ9P266 1359 aa16.08■□□□□ 0.16
ITGA6-202ENST00000409080 CCDC93Q567U6 631 aa16.08■□□□□ 0.16
ITGA6-202ENST00000409080 RUFY3Q7L099 469 aa16.08■□□□□ 0.16
ITGA6-202ENST00000409080 CTAGE1Q96RT6 745 aa16.08■□□□□ 0.16
ITGA6-202ENST00000409080 ASAP1Q9ULH1 1129 aa16.08■□□□□ 0.16
ITGA6-202ENST00000409080 ADGRL3Q9HAR2 1447 aa16.08■□□□□ 0.16
ITGA6-202ENST00000409080 KIF5CO60282 957 aa16.08■□□□□ 0.16
ITGA6-202ENST00000409080 GIGYF2Q6Y7W6 1299 aaKnown RBP16.08■□□□□ 0.16
ITGA6-202ENST00000409080 MRPS27Q92552 414 aaKnown RBP16.08■□□□□ 0.16
ITGA6-202ENST00000409080 SEMA3EO15041 775 aa16.08■□□□□ 0.16
ITGA6-202ENST00000409080 DEXIO95424 95 aa16.08■□□□□ 0.16
ITGA6-202ENST00000409080 MAPKAPK5Q8IW41 473 aa16.08■□□□□ 0.16
ITGA6-202ENST00000409080 PLEKHM2Q8IWE5 1019 aa16.08■□□□□ 0.16
ITGA6-202ENST00000409080 TBC1D2Q9BYX2 928 aa16.08■□□□□ 0.16
ITGA6-202ENST00000409080 EZRP15311 586 aaKnown RBP16.07■□□□□ 0.16
ITGA6-202ENST00000409080 UBE4AQ14139 1066 aa16.07■□□□□ 0.16
ITGA6-202ENST00000409080 TGFBRAP1Q8WUH2 860 aa16.07■□□□□ 0.16
ITGA6-202ENST00000409080 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.07■□□□□ 0.16
ITGA6-202ENST00000409080 APOBRQ0VD83 1088 aa16.07■□□□□ 0.16
ITGA6-202ENST00000409080 ENOX2Q16206 610 aaKnown RBP16.07■□□□□ 0.16
ITGA6-202ENST00000409080 IFI16Q16666 785 aaKnown RBP16.07■□□□□ 0.16
ITGA6-202ENST00000409080 SKIDA1Q1XH10 827 aa16.07■□□□□ 0.16
ITGA6-202ENST00000409080 DALRD3Q5D0E6 543 aaKnown RBP16.07■□□□□ 0.16
ITGA6-202ENST00000409080 PRDM15P57071 1507 aaPredicted RBP16.07■□□□□ 0.16
ITGA6-202ENST00000409080 PTPDC1A2A3K4 754 aa16.07■□□□□ 0.16
ITGA6-202ENST00000409080 PPFIA3O75145 1194 aa16.07■□□□□ 0.16
ITGA6-202ENST00000409080 ZYXQ15942 572 aaKnown RBP16.07■□□□□ 0.16
ITGA6-202ENST00000409080 TAF12Q16514 161 aa16.07■□□□□ 0.16
ITGA6-202ENST00000409080 AXDND1Q5T1B0 1012 aaPredicted RBP16.07■□□□□ 0.16
ITGA6-202ENST00000409080 HAUS3Q68CZ6 603 aa16.07■□□□□ 0.16
ITGA6-202ENST00000409080 ALS2CR12Q96Q35 445 aa16.07■□□□□ 0.16
ITGA6-202ENST00000409080 TTLL7Q6ZT98 887 aa16.07■□□□□ 0.16
ITGA6-202ENST00000409080 MSANTD4Q8NCY6 345 aa16.06■□□□□ 0.16
ITGA6-202ENST00000409080 KLHDC4Q8TBB5 520 aa16.06■□□□□ 0.16
ITGA6-202ENST00000409080 ERVV-1B6SEH8 477 aa16.06■□□□□ 0.16
ITGA6-202ENST00000409080 AZI2Q9H6S1 392 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms