RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 GYG1P46976 350 aa11.68□□□□□ -0.54
POLR1A-202ENST00000409024 CTCFP49711 727 aaPredicted RBP11.68□□□□□ -0.54
POLR1A-202ENST00000409024 DALRD3Q5D0E6 543 aaKnown RBP11.68□□□□□ -0.54
POLR1A-202ENST00000409024 PI16Q6UXB8 463 aa11.68□□□□□ -0.54
POLR1A-202ENST00000409024 CERS3Q8IU89 383 aa11.68□□□□□ -0.54
POLR1A-202ENST00000409024 RASEFQ8IZ41 740 aa11.68□□□□□ -0.54
POLR1A-202ENST00000409024 TDRD7Q8NHU6 1098 aaKnown RBP11.68□□□□□ -0.54
POLR1A-202ENST00000409024 CNKSR1Q969H4 720 aa11.68□□□□□ -0.54
POLR1A-202ENST00000409024 INTS4Q96HW7 963 aaKnown RBP11.68□□□□□ -0.54
POLR1A-202ENST00000409024 ZSCAN31Q96LW9 406 aaPredicted RBP11.68□□□□□ -0.54
POLR1A-202ENST00000409024 SEC62Q99442 399 aaKnown RBP11.68□□□□□ -0.54
POLR1A-202ENST00000409024 LRP2BPQ9P2M1 347 aa11.68□□□□□ -0.54
POLR1A-202ENST00000409024 CYP46A1Q9Y6A2 500 aa11.68□□□□□ -0.54
POLR1A-202ENST00000409024 LRRC37AA6NMS7 1700 aa11.68□□□□□ -0.54
POLR1A-202ENST00000409024 ANKRD31Q8N7Z5 1873 aa11.68□□□□□ -0.54
POLR1A-202ENST00000409024 M0R2C6 588 aa11.67□□□□□ -0.54
POLR1A-202ENST00000409024 GPAA1O43292 621 aa11.67□□□□□ -0.54
POLR1A-202ENST00000409024 FRAT2O75474 233 aaPredicted RBP11.67□□□□□ -0.54
POLR1A-202ENST00000409024 IL1R1P14778 569 aa11.67□□□□□ -0.54
POLR1A-202ENST00000409024 KCNA3P22001 575 aa11.67□□□□□ -0.54
POLR1A-202ENST00000409024 SLC4A3P48751 1232 aa11.67□□□□□ -0.54
POLR1A-202ENST00000409024 GPSM2P81274 684 aa11.67□□□□□ -0.54
POLR1A-202ENST00000409024 MLLT1Q03111 559 aaPredicted RBP11.67□□□□□ -0.54
POLR1A-202ENST00000409024 RUFY3Q7L099 469 aa11.67□□□□□ -0.54
POLR1A-202ENST00000409024 AIDAQ96BJ3 306 aa11.67□□□□□ -0.54
POLR1A-202ENST00000409024 TTC14Q96N46 770 aa11.67□□□□□ -0.54
POLR1A-202ENST00000409024 PUS7LQ9H0K6 701 aaKnown RBP11.67□□□□□ -0.54
POLR1A-202ENST00000409024 TAF1P21675 1872 aa11.67□□□□□ -0.54
POLR1A-202ENST00000409024 ZC3H4Q9UPT8 1303 aaKnown RBP11.66□□□□□ -0.54
POLR1A-202ENST00000409024 KIF13BQ9NQT8 1826 aa11.66□□□□□ -0.54
POLR1A-202ENST00000409024 PATL2C9JE40 543 aaKnown RBP11.66□□□□□ -0.54
POLR1A-202ENST00000409024 HSP90AA1P07900 732 aaKnown RBP11.66□□□□□ -0.54
POLR1A-202ENST00000409024 CUL4AQ13619 759 aa11.66□□□□□ -0.54
POLR1A-202ENST00000409024 IMMTQ16891 758 aaKnown RBP11.66□□□□□ -0.54
POLR1A-202ENST00000409024 BLOC1S2Q6QNY1 142 aa11.66□□□□□ -0.54
POLR1A-202ENST00000409024 CCDC129Q6ZRS4 1044 aa11.66□□□□□ -0.54
POLR1A-202ENST00000409024 C2CD5Q86YS7 1000 aa11.66□□□□□ -0.54
POLR1A-202ENST00000409024 MAGEB6Q8N7X4 407 aa11.66□□□□□ -0.54
POLR1A-202ENST00000409024 TBC1D16Q8TBP0 767 aa11.66□□□□□ -0.54
POLR1A-202ENST00000409024 TBC1D22AQ8WUA7 517 aa11.66□□□□□ -0.54
POLR1A-202ENST00000409024 CHMP4CQ96CF2 233 aa11.66□□□□□ -0.54
POLR1A-202ENST00000409024 JAKMIP1Q96N16 626 aaKnown RBP11.66□□□□□ -0.54
POLR1A-202ENST00000409024 STRBPQ96SI9 672 aaKnown RBP11.66□□□□□ -0.54
POLR1A-202ENST00000409024 EYA3Q99504 573 aa11.66□□□□□ -0.54
POLR1A-202ENST00000409024 SH2B1Q9NRF2 756 aaPredicted RBP11.66□□□□□ -0.54
POLR1A-202ENST00000409024 PDRG1Q9NUG6 133 aa11.66□□□□□ -0.54
POLR1A-202ENST00000409024 CHMP5Q9NZZ3 219 aa11.66□□□□□ -0.54
POLR1A-202ENST00000409024 MKRN1Q9UHC7 482 aaKnown RBP11.66□□□□□ -0.54
POLR1A-202ENST00000409024 NSFL1CQ9UNZ2 370 aaKnown RBP11.66□□□□□ -0.54
POLR1A-202ENST00000409024 LIMCH1Q9UPQ0 1083 aa11.66□□□□□ -0.54
POLR1A-202ENST00000409024 GLTPD2A6NH11 291 aa11.65□□□□□ -0.54
POLR1A-202ENST00000409024 UFL1O94874 794 aa11.65□□□□□ -0.54
POLR1A-202ENST00000409024 CD2BP2O95400 341 aaKnown RBP11.65□□□□□ -0.54
POLR1A-202ENST00000409024 PDIA4P13667 645 aaKnown RBP11.65□□□□□ -0.54
POLR1A-202ENST00000409024 CASTP20810 708 aaKnown RBP11.65□□□□□ -0.54
POLR1A-202ENST00000409024 RPS6KB1P23443 525 aa11.65□□□□□ -0.54
POLR1A-202ENST00000409024 NT5C2P49902 561 aa11.65□□□□□ -0.54
POLR1A-202ENST00000409024 GSTO1P78417 241 aa11.65□□□□□ -0.54
POLR1A-202ENST00000409024 GIMAP6Q6P9H5 292 aa11.65□□□□□ -0.54
POLR1A-202ENST00000409024 FBXL16Q8N461 479 aa11.65□□□□□ -0.54
POLR1A-202ENST00000409024 MPNDQ8N594 471 aa11.65□□□□□ -0.54
POLR1A-202ENST00000409024 ABHD8Q96I13 439 aa11.65□□□□□ -0.54
POLR1A-202ENST00000409024 NEK1Q96PY6 1258 aa11.65□□□□□ -0.54
POLR1A-202ENST00000409024 NACAP1Q9BZK3 213 aa11.65□□□□□ -0.54
POLR1A-202ENST00000409024 COA1Q9GZY4 146 aa11.65□□□□□ -0.54
POLR1A-202ENST00000409024 CD209Q9NNX6 404 aa11.65□□□□□ -0.54
POLR1A-202ENST00000409024 CREBZFQ9NS37 354 aa11.65□□□□□ -0.54
POLR1A-202ENST00000409024 SUGT1Q9Y2Z0 365 aa11.65□□□□□ -0.54
POLR1A-202ENST00000409024 WDR19Q8NEZ3 1342 aa11.64□□□□□ -0.55
POLR1A-202ENST00000409024 KIAA1551Q9HCM1 1747 aa11.64□□□□□ -0.55
POLR1A-202ENST00000409024 FGAP02671 866 aa11.64□□□□□ -0.55
POLR1A-202ENST00000409024 LDHCP07864 332 aa11.64□□□□□ -0.55
POLR1A-202ENST00000409024 CYP21A2P08686 494 aa11.64□□□□□ -0.55
POLR1A-202ENST00000409024 CYP7A1P22680 504 aa11.64□□□□□ -0.55
POLR1A-202ENST00000409024 DDIT3P35638 169 aa11.64□□□□□ -0.55
POLR1A-202ENST00000409024 NAA16Q6N069 864 aaPredicted RBP11.64□□□□□ -0.55
POLR1A-202ENST00000409024 SLF2Q8IX21 1173 aa11.64□□□□□ -0.55
POLR1A-202ENST00000409024 TMX3Q96JJ7 454 aa11.64□□□□□ -0.55
POLR1A-202ENST00000409024 RAI14Q9P0K7 980 aa11.64□□□□□ -0.55
POLR1A-202ENST00000409024 ABCF2Q9UG63 623 aa11.64□□□□□ -0.55
POLR1A-202ENST00000409024 LTBP1Q14766 1721 aa11.63□□□□□ -0.55
POLR1A-202ENST00000409024 FAM205AQ6ZU69 1335 aa11.63□□□□□ -0.55
POLR1A-202ENST00000409024 ZNF213O14771 459 aa11.63□□□□□ -0.55
POLR1A-202ENST00000409024 CHGBP05060 677 aa11.63□□□□□ -0.55
POLR1A-202ENST00000409024 ADCK5Q3MIX3 580 aa11.63□□□□□ -0.55
POLR1A-202ENST00000409024 DPP8Q6V1X1 898 aaPredicted RBP11.63□□□□□ -0.55
POLR1A-202ENST00000409024 DHX32Q7L7V1 743 aaKnown RBP11.63□□□□□ -0.55
POLR1A-202ENST00000409024 SUPT20HQ8NEM7 779 aa11.63□□□□□ -0.55
POLR1A-202ENST00000409024 ZNF622Q969S3 477 aaKnown RBP eCLIP11.63□□□□□ -0.55
POLR1A-202ENST00000409024 RTFDC1Q9BY42 306 aaPredicted RBP11.63□□□□□ -0.55
POLR1A-202ENST00000409024 UPF3BQ9BZI7 483 aaKnown RBP11.63□□□□□ -0.55
POLR1A-202ENST00000409024 ZC3H12CQ9C0D7 883 aaKnown RBP11.63□□□□□ -0.55
POLR1A-202ENST00000409024 POLLQ9UGP5 575 aa11.63□□□□□ -0.55
POLR1A-202ENST00000409024 COL1A1P02452 1464 aaPredicted RBP11.63□□□□□ -0.55
POLR1A-202ENST00000409024 MAGEB6P1A0A0J9YX57 407 aa11.62□□□□□ -0.55
POLR1A-202ENST00000409024 C6orf229H3BNL8 230 aa11.62□□□□□ -0.55
POLR1A-202ENST00000409024 LDHBP07195 334 aaKnown RBP11.62□□□□□ -0.55
POLR1A-202ENST00000409024 PCP11498 1178 aaKnown RBP11.62□□□□□ -0.55
POLR1A-202ENST00000409024 KLRK1P26718 216 aa11.62□□□□□ -0.55
POLR1A-202ENST00000409024 RGS19P49795 217 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms