RNA–Protein interactions for RNA: ENST00000405876.8

TCHP-202, Transcript of trichoplein keratin filament binding, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCHP, Length 3,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-202ENST00000405876 NBPF3Q9H094 633 aa13.76□□□□□ -0.21
TCHP-202ENST00000405876 PARP4Q9UKK3 1724 aaKnown RBP13.76□□□□□ -0.21
TCHP-202ENST00000405876 NUTM2BA6NNL0 878 aaPredicted RBP13.76□□□□□ -0.21
TCHP-202ENST00000405876 NUTM2EB1AL46 878 aaPredicted RBP13.76□□□□□ -0.21
TCHP-202ENST00000405876 ZNF213O14771 459 aa13.76□□□□□ -0.21
TCHP-202ENST00000405876 PDE8BO95263 885 aa13.76□□□□□ -0.21
TCHP-202ENST00000405876 SF3A1Q15459 793 aaKnown RBP13.76□□□□□ -0.21
TCHP-202ENST00000405876 SUSD4Q5VX71 490 aa13.76□□□□□ -0.21
TCHP-202ENST00000405876 TBC1D10CQ8IV04 446 aa13.76□□□□□ -0.21
TCHP-202ENST00000405876 NUTM2AQ8IVF1 878 aaPredicted RBP13.76□□□□□ -0.21
TCHP-202ENST00000405876 VGLL2Q8N8G2 317 aa13.76□□□□□ -0.21
TCHP-202ENST00000405876 PLA2G12BQ9BX93 195 aa13.76□□□□□ -0.21
TCHP-202ENST00000405876 ZNF532Q9HCE3 1301 aa13.76□□□□□ -0.21
TCHP-202ENST00000405876 PLEKHG2Q9H7P9 1386 aa13.76□□□□□ -0.21
TCHP-202ENST00000405876 NUP188Q5SRE5 1749 aa13.75□□□□□ -0.21
TCHP-202ENST00000405876 TPM3P06753 285 aa13.75□□□□□ -0.21
TCHP-202ENST00000405876 IQCB1Q15051 598 aa13.75□□□□□ -0.21
TCHP-202ENST00000405876 RALYLQ86SE5 291 aaKnown RBP13.75□□□□□ -0.21
TCHP-202ENST00000405876 HPS5Q9UPZ3 1129 aa13.75□□□□□ -0.21
TCHP-202ENST00000405876 SKILP12757 684 aa13.75□□□□□ -0.21
TCHP-202ENST00000405876 NCBP1Q09161 790 aaKnown RBP13.75□□□□□ -0.21
TCHP-202ENST00000405876 SNW1Q13573 536 aaKnown RBP13.75□□□□□ -0.21
TCHP-202ENST00000405876 CARMIL3Q8ND23 1372 aa13.75□□□□□ -0.21
TCHP-202ENST00000405876 BCL9O00512 1426 aa13.75□□□□□ -0.21
TCHP-202ENST00000405876 B4E1Z4 1266 aa13.75□□□□□ -0.21
TCHP-202ENST00000405876 UBR2Q8IWV8 1755 aa13.75□□□□□ -0.21
TCHP-202ENST00000405876 MB21D2Q8IYB1 491 aaPredicted RBP13.75□□□□□ -0.21
TCHP-202ENST00000405876 SALL1Q9NSC2 1324 aa13.74□□□□□ -0.21
TCHP-202ENST00000405876 ADD2P35612 726 aa13.74□□□□□ -0.21
TCHP-202ENST00000405876 ATP6V1AP38606 617 aa13.74□□□□□ -0.21
TCHP-202ENST00000405876 CYB5R4Q7L1T6 521 aa13.74□□□□□ -0.21
TCHP-202ENST00000405876 LRRC8AQ8IWT6 810 aa13.74□□□□□ -0.21
TCHP-202ENST00000405876 LLPHQ9BRT6 129 aaKnown RBP13.74□□□□□ -0.21
TCHP-202ENST00000405876 ZSCAN16Q9H4T2 348 aaPredicted RBP13.74□□□□□ -0.21
TCHP-202ENST00000405876 ORC3Q9UBD5 711 aaPredicted RBP13.74□□□□□ -0.21
TCHP-202ENST00000405876 CLIC4Q9Y696 253 aa13.74□□□□□ -0.21
TCHP-202ENST00000405876 RBM43Q6ZSC3 357 aaKnown RBP13.74□□□□□ -0.21
TCHP-202ENST00000405876 CCDC112Q8NEF3 446 aa13.74□□□□□ -0.21
TCHP-202ENST00000405876 ZNF274Q96GC6 653 aaPredicted RBP13.74□□□□□ -0.21
TCHP-202ENST00000405876 CTNNA3Q9UI47 895 aa13.74□□□□□ -0.21
TCHP-202ENST00000405876 PCDHA7Q9UN72 937 aa13.74□□□□□ -0.21
TCHP-202ENST00000405876 SHANK3Q9BYB0 1731 aa13.74□□□□□ -0.21
TCHP-202ENST00000405876 CCDC69A6NI79 296 aa13.73□□□□□ -0.21
TCHP-202ENST00000405876 CPLX1O14810 134 aa13.73□□□□□ -0.21
TCHP-202ENST00000405876 KCNQ2O43526 872 aa13.73□□□□□ -0.21
TCHP-202ENST00000405876 PDE8AO60658 829 aa13.73□□□□□ -0.21
TCHP-202ENST00000405876 ZFYP08048 801 aaPredicted RBP13.73□□□□□ -0.21
TCHP-202ENST00000405876 PDE6AP16499 860 aa13.73□□□□□ -0.21
TCHP-202ENST00000405876 ZSCAN20P17040 1043 aaPredicted RBP13.73□□□□□ -0.21
TCHP-202ENST00000405876 MARCKSP29966 332 aaPredicted RBP13.73□□□□□ -0.21
TCHP-202ENST00000405876 NDUFA8P51970 172 aa13.73□□□□□ -0.21
TCHP-202ENST00000405876 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.73□□□□□ -0.21
TCHP-202ENST00000405876 PHKBQ93100 1093 aa13.73□□□□□ -0.21
TCHP-202ENST00000405876 SMIM22K7EJ46 135 aa13.73□□□□□ -0.21
TCHP-202ENST00000405876 PRKAB2O43741 272 aa13.73□□□□□ -0.21
TCHP-202ENST00000405876 BCAMP50895 628 aa13.73□□□□□ -0.21
TCHP-202ENST00000405876 RASGRF1Q13972 1273 aa13.73□□□□□ -0.21
TCHP-202ENST00000405876 STX1AQ16623 288 aa13.73□□□□□ -0.21
TCHP-202ENST00000405876 DPCR1Q3MIW9 517 aa13.73□□□□□ -0.21
TCHP-202ENST00000405876 HSP90AA4PQ58FG1 418 aa13.73□□□□□ -0.21
TCHP-202ENST00000405876 MICU3Q86XE3 530 aa13.73□□□□□ -0.21
TCHP-202ENST00000405876 NCOA7Q8NI08 942 aa13.73□□□□□ -0.21
TCHP-202ENST00000405876 STRCQ7RTU9 1775 aa13.73□□□□□ -0.21
TCHP-202ENST00000405876 SMC2O95347 1197 aa13.72□□□□□ -0.21
TCHP-202ENST00000405876 CRKLP46109 303 aaKnown RBP13.72□□□□□ -0.21
TCHP-202ENST00000405876 CTDSPL2Q05D32 466 aa13.72□□□□□ -0.21
TCHP-202ENST00000405876 NAA16Q6N069 864 aaPredicted RBP13.72□□□□□ -0.21
TCHP-202ENST00000405876 MAGEB6Q8N7X4 407 aa13.72□□□□□ -0.21
TCHP-202ENST00000405876 RCOR1Q9UKL0 485 aa13.72□□□□□ -0.21
TCHP-202ENST00000405876 KIF28PB7ZC32 967 aa13.72□□□□□ -0.21
TCHP-202ENST00000405876 ITPK1Q13572 414 aa13.72□□□□□ -0.21
TCHP-202ENST00000405876 STK38Q15208 465 aa13.72□□□□□ -0.21
TCHP-202ENST00000405876 CEP135Q66GS9 1140 aa13.72□□□□□ -0.21
TCHP-202ENST00000405876 DHX40Q8IX18 779 aaKnown RBP13.72□□□□□ -0.21
TCHP-202ENST00000405876 CCDC82Q8N4S0 544 aa13.72□□□□□ -0.21
TCHP-202ENST00000405876 MIGA1Q8NAN2 632 aa13.72□□□□□ -0.21
TCHP-202ENST00000405876 C8orf76Q96K31 380 aa13.72□□□□□ -0.21
TCHP-202ENST00000405876 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.72□□□□□ -0.21
TCHP-202ENST00000405876 ARMT1Q9H993 441 aa13.72□□□□□ -0.21
TCHP-202ENST00000405876 CDHR2Q9BYE9 1310 aa13.72□□□□□ -0.21
TCHP-202ENST00000405876 INTS5Q6P9B9 1019 aaKnown RBP13.72□□□□□ -0.21
TCHP-202ENST00000405876 MPHOSPH8Q99549 860 aa13.72□□□□□ -0.21
TCHP-202ENST00000405876 ZKSCAN3Q9BRR0 538 aa13.72□□□□□ -0.21
TCHP-202ENST00000405876 ZRSR1Q15695 479 aaKnown RBP13.71□□□□□ -0.21
TCHP-202ENST00000405876 LRRFIP1Q32MZ4 808 aaKnown RBP13.71□□□□□ -0.21
TCHP-202ENST00000405876 RRP12Q5JTH9 1297 aaKnown RBP13.71□□□□□ -0.21
TCHP-202ENST00000405876 SMAP1Q8IYB5 467 aaPredicted RBP13.71□□□□□ -0.21
TCHP-202ENST00000405876 ZNF34Q8IZ26 560 aa13.71□□□□□ -0.21
TCHP-202ENST00000405876 AIDAQ96BJ3 306 aa13.71□□□□□ -0.21
TCHP-202ENST00000405876 TOMM22Q9NS69 142 aa13.71□□□□□ -0.21
TCHP-202ENST00000405876 FBXO3Q9UK99 471 aa13.71□□□□□ -0.21
TCHP-202ENST00000405876 NEDD4P46934 1319 aa13.71□□□□□ -0.21
TCHP-202ENST00000405876 MBD4O95243 580 aa13.71□□□□□ -0.22
TCHP-202ENST00000405876 PDIA4P13667 645 aaKnown RBP13.71□□□□□ -0.22
TCHP-202ENST00000405876 IL6STP40189 918 aaPredicted RBP13.71□□□□□ -0.22
TCHP-202ENST00000405876 FAM160A1Q05DH4 1040 aa13.71□□□□□ -0.22
TCHP-202ENST00000405876 DDB1Q16531 1140 aa13.71□□□□□ -0.22
TCHP-202ENST00000405876 BICDL1Q6ZP65 573 aa13.71□□□□□ -0.22
TCHP-202ENST00000405876 CCDC24Q8N4L8 307 aa13.71□□□□□ -0.22
TCHP-202ENST00000405876 NIP7Q9Y221 180 aaKnown RBP eCLIP13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms