RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 ZNF532Q9HCE3 1301 aa12.61□□□□□ -0.39
LINC00649-202ENST00000400353 IDH1O75874 414 aaKnown RBP12.6□□□□□ -0.39
LINC00649-202ENST00000400353 HCLS1P14317 486 aaPredicted RBP12.6□□□□□ -0.39
LINC00649-202ENST00000400353 MAP3K11Q16584 847 aa12.6□□□□□ -0.39
LINC00649-202ENST00000400353 PI16Q6UXB8 463 aa12.6□□□□□ -0.39
LINC00649-202ENST00000400353 SPATA5Q8NB90 893 aa12.6□□□□□ -0.39
LINC00649-202ENST00000400353 QTRT2Q9H974 415 aaKnown RBP12.6□□□□□ -0.39
LINC00649-202ENST00000400353 NOL7Q9UMY1 257 aaKnown RBP12.6□□□□□ -0.39
LINC00649-202ENST00000400353 A0A0G2JLW4 131 aa12.6□□□□□ -0.39
LINC00649-202ENST00000400353 TCRBV5S4A2TA0A5A2 114 aa12.6□□□□□ -0.39
LINC00649-202ENST00000400353 CCT2P78371 535 aaKnown RBP12.6□□□□□ -0.39
LINC00649-202ENST00000400353 GJD4Q96KN9 370 aaPredicted RBP12.6□□□□□ -0.39
LINC00649-202ENST00000400353 DOCK2Q92608 1830 aa12.6□□□□□ -0.39
LINC00649-202ENST00000400353 GNAT2P19087 354 aa12.59□□□□□ -0.39
LINC00649-202ENST00000400353 HAND2P61296 217 aa12.59□□□□□ -0.39
LINC00649-202ENST00000400353 AIDAQ96BJ3 306 aa12.59□□□□□ -0.39
LINC00649-202ENST00000400353 CLSTN2Q9H4D0 955 aa12.59□□□□□ -0.39
LINC00649-202ENST00000400353 MYH15Q9Y2K3 1946 aa12.59□□□□□ -0.39
LINC00649-202ENST00000400353 CARMIL3Q8ND23 1372 aa12.59□□□□□ -0.39
LINC00649-202ENST00000400353 KLF18A0A0U1RQI7 1052 aa12.58□□□□□ -0.39
LINC00649-202ENST00000400353 DTNBO60941 627 aa12.58□□□□□ -0.39
LINC00649-202ENST00000400353 FAM173BQ6P4H8 233 aa12.58□□□□□ -0.39
LINC00649-202ENST00000400353 GIMAP6Q6P9H5 292 aa12.58□□□□□ -0.39
LINC00649-202ENST00000400353 BICD2Q8TD16 824 aa12.58□□□□□ -0.39
LINC00649-202ENST00000400353 TMEM87BQ96K49 555 aa12.58□□□□□ -0.39
LINC00649-202ENST00000400353 TFIP11Q9UBB9 837 aaKnown RBP12.58□□□□□ -0.39
LINC00649-202ENST00000400353 RCOR1Q9UKL0 485 aa12.58□□□□□ -0.39
LINC00649-202ENST00000400353 TRPC5Q9UL62 973 aaPredicted RBP12.58□□□□□ -0.39
LINC00649-202ENST00000400353 CNTNAP4Q9C0A0 1308 aa12.58□□□□□ -0.4
LINC00649-202ENST00000400353 PATL2C9JE40 543 aaKnown RBP12.58□□□□□ -0.4
LINC00649-202ENST00000400353 CDKL5O76039 1030 aa12.58□□□□□ -0.4
LINC00649-202ENST00000400353 RBM43Q6ZSC3 357 aaKnown RBP12.58□□□□□ -0.4
LINC00649-202ENST00000400353 STRBPQ96SI9 672 aaKnown RBP12.58□□□□□ -0.4
LINC00649-202ENST00000400353 TNMDQ9H2S6 317 aa12.58□□□□□ -0.4
LINC00649-202ENST00000400353 KAT6BQ8WYB5 2073 aa12.58□□□□□ -0.4
LINC00649-202ENST00000400353 GOLGA8BA8MQT2 603 aa12.57□□□□□ -0.4
LINC00649-202ENST00000400353 APPP05067 770 aa12.57□□□□□ -0.4
LINC00649-202ENST00000400353 LIG1P18858 919 aa12.57□□□□□ -0.4
LINC00649-202ENST00000400353 ANTXR2P58335 489 aa12.57□□□□□ -0.4
LINC00649-202ENST00000400353 SF3B3Q15393 1217 aaKnown RBP12.57□□□□□ -0.4
LINC00649-202ENST00000400353 CPLX2Q6PUV4 134 aaKnown RBP12.57□□□□□ -0.4
LINC00649-202ENST00000400353 CHST3Q7LGC8 479 aa12.57□□□□□ -0.4
LINC00649-202ENST00000400353 HELBQ8NG08 1087 aaPredicted RBP12.57□□□□□ -0.4
LINC00649-202ENST00000400353 SEC31BQ9NQW1 1179 aa12.57□□□□□ -0.4
LINC00649-202ENST00000400353 WWC3Q9ULE0 1092 aa12.57□□□□□ -0.4
LINC00649-202ENST00000400353 ANGEL1Q9UNK9 670 aaKnown RBP12.57□□□□□ -0.4
LINC00649-202ENST00000400353 TIAM2Q8IVF5 1701 aa12.57□□□□□ -0.4
LINC00649-202ENST00000400353 CPLX1O14810 134 aa12.57□□□□□ -0.4
LINC00649-202ENST00000400353 CTAGE5O15320 804 aa12.57□□□□□ -0.4
LINC00649-202ENST00000400353 CAVIN2O95810 425 aa12.57□□□□□ -0.4
LINC00649-202ENST00000400353 RASGRF1Q13972 1273 aa12.57□□□□□ -0.4
LINC00649-202ENST00000400353 CNNM2Q9H8M5 875 aa12.57□□□□□ -0.4
LINC00649-202ENST00000400353 NCOA5Q9HCD5 579 aaKnown RBP12.57□□□□□ -0.4
LINC00649-202ENST00000400353 GNL3LQ9NVN8 582 aaKnown RBP12.57□□□□□ -0.4
LINC00649-202ENST00000400353 DACT1Q9NYF0 836 aa12.57□□□□□ -0.4
LINC00649-202ENST00000400353 ZKSCAN5Q9Y2L8 839 aa12.57□□□□□ -0.4
LINC00649-202ENST00000400353 PNPLA7Q6ZV29 1317 aa12.56□□□□□ -0.4
LINC00649-202ENST00000400353 FAM177BA6PVY3 158 aa12.56□□□□□ -0.4
LINC00649-202ENST00000400353 SH2B2O14492 632 aaPredicted RBP12.56□□□□□ -0.4
LINC00649-202ENST00000400353 ZNF500O60304 480 aaPredicted RBP12.56□□□□□ -0.4
LINC00649-202ENST00000400353 KDM4AO75164 1064 aa12.56□□□□□ -0.4
LINC00649-202ENST00000400353 PTMAP06454 111 aaKnown RBP12.56□□□□□ -0.4
LINC00649-202ENST00000400353 ADD1P35611 737 aaKnown RBP12.56□□□□□ -0.4
LINC00649-202ENST00000400353 CHRNDQ07001 517 aa12.56□□□□□ -0.4
LINC00649-202ENST00000400353 FAM182BQ5T319 152 aa12.56□□□□□ -0.4
LINC00649-202ENST00000400353 RC3H1Q5TC82 1133 aaKnown RBP12.56□□□□□ -0.4
LINC00649-202ENST00000400353 BRAPQ7Z569 592 aa12.56□□□□□ -0.4
LINC00649-202ENST00000400353 ANKRD18AQ8IVF6 992 aa12.56□□□□□ -0.4
LINC00649-202ENST00000400353 C8orf76Q96K31 380 aa12.56□□□□□ -0.4
LINC00649-202ENST00000400353 MTA3Q9BTC8 594 aa12.56□□□□□ -0.4
LINC00649-202ENST00000400353 NACAP1Q9BZK3 213 aa12.56□□□□□ -0.4
LINC00649-202ENST00000400353 SCN7AQ01118 1682 aa12.56□□□□□ -0.4
LINC00649-202ENST00000400353 MYH14Q7Z406 1995 aaKnown RBP12.55□□□□□ -0.4
LINC00649-202ENST00000400353 FDPSP14324 419 aaKnown RBP12.55□□□□□ -0.4
LINC00649-202ENST00000400353 TBC1D10CQ8IV04 446 aa12.55□□□□□ -0.4
LINC00649-202ENST00000400353 MAGEB6Q8N7X4 407 aa12.55□□□□□ -0.4
LINC00649-202ENST00000400353 FAM200AQ8TCP9 573 aa12.55□□□□□ -0.4
LINC00649-202ENST00000400353 PGBD1Q96JS3 809 aa12.55□□□□□ -0.4
LINC00649-202ENST00000400353 KRT23Q9C075 422 aa12.55□□□□□ -0.4
LINC00649-202ENST00000400353 NYXQ9GZU5 481 aa12.55□□□□□ -0.4
LINC00649-202ENST00000400353 NAPBQ9H115 298 aa12.55□□□□□ -0.4
LINC00649-202ENST00000400353 HPS5Q9UPZ3 1129 aa12.55□□□□□ -0.4
LINC00649-202ENST00000400353 UBE4AQ14139 1066 aa12.55□□□□□ -0.4
LINC00649-202ENST00000400353 TMEM132AQ24JP5 1023 aa12.55□□□□□ -0.4
LINC00649-202ENST00000400353 SLC10A5Q5PT55 438 aa12.55□□□□□ -0.4
LINC00649-202ENST00000400353 IFNL3Q8IZI9 196 aa12.55□□□□□ -0.4
LINC00649-202ENST00000400353 NBPF3Q9H094 633 aa12.55□□□□□ -0.4
LINC00649-202ENST00000400353 ORC3Q9UBD5 711 aaPredicted RBP12.55□□□□□ -0.4
LINC00649-202ENST00000400353 C4AP0C0L4 1744 aa12.54□□□□□ -0.4
LINC00649-202ENST00000400353 C4BP0C0L5 1744 aa12.54□□□□□ -0.4
LINC00649-202ENST00000400353 MBD4O95243 580 aa12.54□□□□□ -0.4
LINC00649-202ENST00000400353 TPM3P06753 285 aa12.54□□□□□ -0.4
LINC00649-202ENST00000400353 TYRO3Q06418 890 aa12.54□□□□□ -0.4
LINC00649-202ENST00000400353 SASS6Q6UVJ0 657 aa12.54□□□□□ -0.4
LINC00649-202ENST00000400353 CCDC73Q6ZRK6 1079 aa12.54□□□□□ -0.4
LINC00649-202ENST00000400353 LINC00116Q8NCU8 138 aa12.54□□□□□ -0.4
LINC00649-202ENST00000400353 BSDC1Q9NW68 430 aaPredicted RBP12.54□□□□□ -0.4
LINC00649-202ENST00000400353 RTEL1Q9NZ71 1219 aa12.54□□□□□ -0.4
LINC00649-202ENST00000400353 ZNF804BA4D1E1 1349 aa12.53□□□□□ -0.4
LINC00649-202ENST00000400353 LIFRP42702 1097 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms