RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 CTCFLQ8NI51 663 aaPredicted RBP15.61■□□□□ 0.09
SIRPA-203ENST00000400068 TTC14Q96N46 770 aa15.61■□□□□ 0.09
SIRPA-203ENST00000400068 CLSTN1O94985 981 aa15.6■□□□□ 0.09
SIRPA-203ENST00000400068 LMOD1P29536 600 aaPredicted RBP15.6■□□□□ 0.09
SIRPA-203ENST00000400068 ZNF771Q7L3S4 317 aaPredicted RBP15.6■□□□□ 0.09
SIRPA-203ENST00000400068 MAGEB6P1A0A0J9YX57 407 aa15.6■□□□□ 0.09
SIRPA-203ENST00000400068 PDE6AP16499 860 aa15.6■□□□□ 0.09
SIRPA-203ENST00000400068 ZMYM1Q5SVZ6 1142 aa15.6■□□□□ 0.09
SIRPA-203ENST00000400068 LPIN2Q92539 896 aa15.6■□□□□ 0.09
SIRPA-203ENST00000400068 SYKP43405 635 aa15.6■□□□□ 0.09
SIRPA-203ENST00000400068 FOXO4P98177 505 aa15.6■□□□□ 0.09
SIRPA-203ENST00000400068 CATIPQ7Z7H3 387 aa15.6■□□□□ 0.09
SIRPA-203ENST00000400068 RNF41Q9H4P4 317 aaPredicted RBP15.6■□□□□ 0.09
SIRPA-203ENST00000400068 TOB2Q14106 344 aaPredicted RBP15.6■□□□□ 0.09
SIRPA-203ENST00000400068 STX1AQ16623 288 aa15.6■□□□□ 0.09
SIRPA-203ENST00000400068 RPGRQ92834 1020 aaKnown RBP15.6■□□□□ 0.09
SIRPA-203ENST00000400068 DSCC1Q9BVC3 393 aa15.6■□□□□ 0.09
SIRPA-203ENST00000400068 TOM1O60784 492 aa15.59■□□□□ 0.09
SIRPA-203ENST00000400068 ZSCAN29Q8IWY8 852 aaPredicted RBP15.59■□□□□ 0.09
SIRPA-203ENST00000400068 PDE8BO95263 885 aa15.59■□□□□ 0.09
SIRPA-203ENST00000400068 TPM2P07951 284 aa15.59■□□□□ 0.09
SIRPA-203ENST00000400068 ANGEL1Q9UNK9 670 aaKnown RBP15.59■□□□□ 0.09
SIRPA-203ENST00000400068 KCNJ14Q9UNX9 436 aa15.59■□□□□ 0.09
SIRPA-203ENST00000400068 TNS3Q68CZ2 1445 aa15.59■□□□□ 0.09
SIRPA-203ENST00000400068 CCDC196A0A1B0GTZ2 297 aa15.59■□□□□ 0.09
SIRPA-203ENST00000400068 AFMP43652 599 aa15.59■□□□□ 0.09
SIRPA-203ENST00000400068 NLRP5P59047 1200 aa15.59■□□□□ 0.09
SIRPA-203ENST00000400068 TTLL11Q8NHH1 800 aa15.59■□□□□ 0.09
SIRPA-203ENST00000400068 WASF1Q92558 559 aa15.59■□□□□ 0.09
SIRPA-203ENST00000400068 ERBB4Q15303 1308 aa15.59■□□□□ 0.09
SIRPA-203ENST00000400068 NCAPD2Q15021 1401 aa15.58■□□□□ 0.09
SIRPA-203ENST00000400068 PRKAB2O43741 272 aa15.58■□□□□ 0.09
SIRPA-203ENST00000400068 PDIA3P30101 505 aaKnown RBP15.58■□□□□ 0.09
SIRPA-203ENST00000400068 TMC6Q7Z403 805 aa15.58■□□□□ 0.09
SIRPA-203ENST00000400068 IFIT1BQ5T764 474 aaKnown RBP15.58■□□□□ 0.08
SIRPA-203ENST00000400068 AIFM3Q96NN9 605 aa15.58■□□□□ 0.08
SIRPA-203ENST00000400068 NOLC1Q14978 699 aaKnown RBP eCLIP15.58■□□□□ 0.08
SIRPA-203ENST00000400068 UVSSAQ2YD98 709 aa15.58■□□□□ 0.08
SIRPA-203ENST00000400068 CPLX3Q8WVH0 158 aa15.58■□□□□ 0.08
SIRPA-203ENST00000400068 SALL3Q9BXA9 1300 aa15.58■□□□□ 0.08
SIRPA-203ENST00000400068 EPB41L2O43491 1005 aaKnown RBP15.57■□□□□ 0.08
SIRPA-203ENST00000400068 DDIT3P35638 169 aa15.57■□□□□ 0.08
SIRPA-203ENST00000400068 ATG9AQ7Z3C6 839 aa15.57■□□□□ 0.08
SIRPA-203ENST00000400068 CBX8Q9HC52 389 aa15.57■□□□□ 0.08
SIRPA-203ENST00000400068 MCM9Q9NXL9 1143 aa15.57■□□□□ 0.08
SIRPA-203ENST00000400068 AATFQ9NY61 560 aaKnown RBP eCLIP15.57■□□□□ 0.08
SIRPA-203ENST00000400068 KCNQ2O43526 872 aa15.57■□□□□ 0.08
SIRPA-203ENST00000400068 CERS3Q8IU89 383 aa15.57■□□□□ 0.08
SIRPA-203ENST00000400068 ESR2Q92731 530 aa15.57■□□□□ 0.08
SIRPA-203ENST00000400068 RTCBQ9Y3I0 505 aaKnown RBP15.57■□□□□ 0.08
SIRPA-203ENST00000400068 CYP2E1P05181 493 aaPredicted RBP15.57■□□□□ 0.08
SIRPA-203ENST00000400068 MCAMP43121 646 aa15.57■□□□□ 0.08
SIRPA-203ENST00000400068 SUSD4Q5VX71 490 aa15.57■□□□□ 0.08
SIRPA-203ENST00000400068 ZNF444Q8N0Y2 327 aaPredicted RBP15.57■□□□□ 0.08
SIRPA-203ENST00000400068 SMARCC1Q92922 1105 aaPredicted RBP15.57■□□□□ 0.08
SIRPA-203ENST00000400068 KRT23Q9C075 422 aa15.57■□□□□ 0.08
SIRPA-203ENST00000400068 NOL7Q9UMY1 257 aaKnown RBP15.57■□□□□ 0.08
SIRPA-203ENST00000400068 MPHOSPH10O00566 681 aaKnown RBP15.56■□□□□ 0.08
SIRPA-203ENST00000400068 TPM1P09493 284 aa15.56■□□□□ 0.08
SIRPA-203ENST00000400068 PIH1D3Q9NQM4 214 aaKnown RBP15.56■□□□□ 0.08
SIRPA-203ENST00000400068 CCNL1Q9UK58 526 aaPredicted RBP15.56■□□□□ 0.08
SIRPA-203ENST00000400068 MEGF6O75095 1541 aa15.56■□□□□ 0.08
SIRPA-203ENST00000400068 UBR1Q8IWV7 1749 aa15.56■□□□□ 0.08
SIRPA-203ENST00000400068 PPP1R1BQ9UD71 204 aaPredicted RBP15.56■□□□□ 0.08
SIRPA-203ENST00000400068 CTAGE5O15320 804 aa15.56■□□□□ 0.08
SIRPA-203ENST00000400068 TPTE2Q6XPS3 522 aa15.56■□□□□ 0.08
SIRPA-203ENST00000400068 STOX1Q6ZVD7 989 aa15.56■□□□□ 0.08
SIRPA-203ENST00000400068 TSC1Q92574 1164 aa15.56■□□□□ 0.08
SIRPA-203ENST00000400068 COL9A3Q14050 684 aaPredicted RBP15.55■□□□□ 0.08
SIRPA-203ENST00000400068 NSUN7Q8NE18 718 aaKnown RBP15.55■□□□□ 0.08
SIRPA-203ENST00000400068 KCNG4Q8TDN1 519 aa15.55■□□□□ 0.08
SIRPA-203ENST00000400068 TSR1Q2NL82 804 aaKnown RBP15.55■□□□□ 0.08
SIRPA-203ENST00000400068 CCDC112Q8NEF3 446 aa15.55■□□□□ 0.08
SIRPA-203ENST00000400068 RIMBP2O15034 1052 aa15.55■□□□□ 0.08
SIRPA-203ENST00000400068 PFKFB2O60825 505 aa15.55■□□□□ 0.08
SIRPA-203ENST00000400068 SFPQP23246 707 aaKnown RBP eCLIP15.55■□□□□ 0.08
SIRPA-203ENST00000400068 FER1L4A9Z1Z3 1794 aa15.54■□□□□ 0.08
SIRPA-203ENST00000400068 SSBP05455 408 aaKnown RBP eCLIP15.54■□□□□ 0.08
SIRPA-203ENST00000400068 TNNT1P13805 278 aa15.54■□□□□ 0.08
SIRPA-203ENST00000400068 CHRNDQ07001 517 aa15.54■□□□□ 0.08
SIRPA-203ENST00000400068 ANKRD20A12PQ8NF67 263 aa15.54■□□□□ 0.08
SIRPA-203ENST00000400068 CABP5Q9NP86 173 aa15.54■□□□□ 0.08
SIRPA-203ENST00000400068 SAP30BPQ9UHR5 308 aaKnown RBP15.54■□□□□ 0.08
SIRPA-203ENST00000400068 KRT40Q6A162 431 aa15.54■□□□□ 0.08
SIRPA-203ENST00000400068 CRNKL1Q9BZJ0 848 aaKnown RBP15.54■□□□□ 0.08
SIRPA-203ENST00000400068 RFX5P48382 616 aaPredicted RBP15.54■□□□□ 0.08
SIRPA-203ENST00000400068 PICALMQ13492 652 aa15.54■□□□□ 0.08
SIRPA-203ENST00000400068 FAM47AQ5JRC9 791 aa15.54■□□□□ 0.08
SIRPA-203ENST00000400068 IFNL3Q8IZI9 196 aa15.54■□□□□ 0.08
SIRPA-203ENST00000400068 CLSTN2Q9H4D0 955 aa15.54■□□□□ 0.08
SIRPA-203ENST00000400068 TXLNAP40222 546 aa15.53■□□□□ 0.08
SIRPA-203ENST00000400068 USPL1Q5W0Q7 1092 aa15.53■□□□□ 0.08
SIRPA-203ENST00000400068 CNNM2Q9H8M5 875 aa15.53■□□□□ 0.08
SIRPA-203ENST00000400068 CYP2D7A0A087X1C5 515 aa15.53■□□□□ 0.08
SIRPA-203ENST00000400068 MNS1Q8NEH6 495 aa15.53■□□□□ 0.08
SIRPA-203ENST00000400068 PLIN2Q99541 437 aa15.53■□□□□ 0.08
SIRPA-203ENST00000400068 ZHX3Q9H4I2 956 aa15.53■□□□□ 0.08
SIRPA-203ENST00000400068 SRP68Q9UHB9 627 aaKnown RBP15.53■□□□□ 0.08
SIRPA-203ENST00000400068 CLIC4Q9Y696 253 aa15.53■□□□□ 0.08
SIRPA-203ENST00000400068 V9GY48 417 aaPredicted RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms