RNA–Protein interactions for RNA: ENST00000399595.5

CACNA1C-206, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-206ENST00000399595 TSR2Q969E8 191 aaKnown RBP12.59□□□□□ -0.39
CACNA1C-206ENST00000399595 PLVAPQ9BX97 442 aa12.59□□□□□ -0.39
CACNA1C-206ENST00000399595 CUX1P39880 1505 aa12.59□□□□□ -0.39
CACNA1C-206ENST00000399595 ATP5J2-PTCD1G3V325 749 aa12.59□□□□□ -0.39
CACNA1C-206ENST00000399595 TTC30BQ8N4P2 665 aa12.59□□□□□ -0.39
CACNA1C-206ENST00000399595 CNBD1Q8NA66 436 aa12.59□□□□□ -0.39
CACNA1C-206ENST00000399595 RNF34Q969K3 372 aa12.59□□□□□ -0.39
CACNA1C-206ENST00000399595 SPECC1L-ADORA2AF8WAN1 911 aa12.59□□□□□ -0.39
CACNA1C-206ENST00000399595 IDEP14735 1019 aa12.59□□□□□ -0.39
CACNA1C-206ENST00000399595 PTGS1P23219 599 aa12.59□□□□□ -0.39
CACNA1C-206ENST00000399595 PPFIA1Q13136 1202 aa12.59□□□□□ -0.39
CACNA1C-206ENST00000399595 GDPD2Q9HCC8 539 aa12.59□□□□□ -0.39
CACNA1C-206ENST00000399595 ZBTB21Q9ULJ3 1066 aa12.59□□□□□ -0.39
CACNA1C-206ENST00000399595 FAF1Q9UNN5 650 aaPredicted RBP12.59□□□□□ -0.39
CACNA1C-206ENST00000399595 FRMD3A2A2Y4 597 aa12.59□□□□□ -0.39
CACNA1C-206ENST00000399595 HPDP32754 393 aaPredicted RBP12.59□□□□□ -0.39
CACNA1C-206ENST00000399595 SSRP1Q08945 709 aaKnown RBP12.59□□□□□ -0.39
CACNA1C-206ENST00000399595 TTF1Q15361 905 aaPredicted RBP12.59□□□□□ -0.39
CACNA1C-206ENST00000399595 TMEM57Q8N5G2 664 aa12.59□□□□□ -0.39
CACNA1C-206ENST00000399595 PEX19P40855 299 aa12.59□□□□□ -0.39
CACNA1C-206ENST00000399595 PRPHP41219 470 aa12.59□□□□□ -0.39
CACNA1C-206ENST00000399595 ERCC6LQ2NKX8 1250 aa12.59□□□□□ -0.39
CACNA1C-206ENST00000399595 STX8Q9UNK0 236 aa12.59□□□□□ -0.39
CACNA1C-206ENST00000399595 NESP48681 1621 aa12.58□□□□□ -0.39
CACNA1C-206ENST00000399595 DBN1Q16643 649 aa12.58□□□□□ -0.39
CACNA1C-206ENST00000399595 ATP2A3Q93084 1043 aa12.58□□□□□ -0.39
CACNA1C-206ENST00000399595 NACA2Q9H009 215 aa12.58□□□□□ -0.39
CACNA1C-206ENST00000399595 CSADQ9Y600 493 aa12.58□□□□□ -0.39
CACNA1C-206ENST00000399595 TSTA3Q13630 321 aaPredicted RBP12.58□□□□□ -0.4
CACNA1C-206ENST00000399595 ANKRD35Q8N283 1001 aa12.58□□□□□ -0.4
CACNA1C-206ENST00000399595 U3KPZ7 1027 aaPredicted RBP12.58□□□□□ -0.4
CACNA1C-206ENST00000399595 TEX14Q8IWB6 1497 aa12.58□□□□□ -0.4
CACNA1C-206ENST00000399595 ZNF213O14771 459 aa12.58□□□□□ -0.4
CACNA1C-206ENST00000399595 HSP90AA5PQ58FG0 334 aa12.58□□□□□ -0.4
CACNA1C-206ENST00000399595 PRPF40BQ6NWY9 871 aaKnown RBP12.58□□□□□ -0.4
CACNA1C-206ENST00000399595 DZIP3Q86Y13 1208 aaKnown RBP12.58□□□□□ -0.4
CACNA1C-206ENST00000399595 MCUR1Q96AQ8 359 aa12.58□□□□□ -0.4
CACNA1C-206ENST00000399595 IFIT3O14879 490 aaKnown RBP12.58□□□□□ -0.4
CACNA1C-206ENST00000399595 IQSEC3Q9UPP2 1182 aaPredicted RBP12.58□□□□□ -0.4
CACNA1C-206ENST00000399595 OPHN1O60890 802 aa12.58□□□□□ -0.4
CACNA1C-206ENST00000399595 AKR1B10O60218 316 aa12.57□□□□□ -0.4
CACNA1C-206ENST00000399595 HMGB1P09429 215 aaKnown RBP12.57□□□□□ -0.4
CACNA1C-206ENST00000399595 IRAK4Q9NWZ3 460 aa12.57□□□□□ -0.4
CACNA1C-206ENST00000399595 BACH1O14867 736 aa12.57□□□□□ -0.4
CACNA1C-206ENST00000399595 STX6O43752 255 aa12.57□□□□□ -0.4
CACNA1C-206ENST00000399595 CALCOCO2Q13137 446 aa12.57□□□□□ -0.4
CACNA1C-206ENST00000399595 QTRT2Q9H974 415 aaKnown RBP12.57□□□□□ -0.4
CACNA1C-206ENST00000399595 TRIM35Q9UPQ4 493 aa12.57□□□□□ -0.4
CACNA1C-206ENST00000399595 MUM1Q2TAK8 710 aa12.57□□□□□ -0.4
CACNA1C-206ENST00000399595 TRPC3Q13507 836 aa12.57□□□□□ -0.4
CACNA1C-206ENST00000399595 DUSP27Q5VZP5 1158 aa12.57□□□□□ -0.4
CACNA1C-206ENST00000399595 ARFGAP2Q8N6H7 521 aa12.57□□□□□ -0.4
CACNA1C-206ENST00000399595 CALML4Q96GE6 196 aa12.57□□□□□ -0.4
CACNA1C-206ENST00000399595 MRFAP1L1Q96HT8 127 aa12.57□□□□□ -0.4
CACNA1C-206ENST00000399595 CC2D2AQ9P2K1 1620 aa12.57□□□□□ -0.4
CACNA1C-206ENST00000399595 CETN3O15182 167 aa12.57□□□□□ -0.4
CACNA1C-206ENST00000399595 ZNF165P49910 485 aa12.57□□□□□ -0.4
CACNA1C-206ENST00000399595 AMPD3Q01432 767 aa12.57□□□□□ -0.4
CACNA1C-206ENST00000399595 RINLQ6ZS11 566 aa12.57□□□□□ -0.4
CACNA1C-206ENST00000399595 RMDN2Q96LZ7 410 aa12.57□□□□□ -0.4
CACNA1C-206ENST00000399595 MAK16Q9BXY0 300 aaKnown RBP12.57□□□□□ -0.4
CACNA1C-206ENST00000399595 SH2D4AQ9H788 454 aa12.57□□□□□ -0.4
CACNA1C-206ENST00000399595 NKIRAS1Q9NYS0 192 aa12.57□□□□□ -0.4
CACNA1C-206ENST00000399595 GINS2Q9Y248 185 aa12.57□□□□□ -0.4
CACNA1C-206ENST00000399595 DENND4BO75064 1496 aaPredicted RBP12.57□□□□□ -0.4
CACNA1C-206ENST00000399595 N4BP3O15049 544 aa12.56□□□□□ -0.4
CACNA1C-206ENST00000399595 ATP2A2P16615 1042 aaKnown RBP12.56□□□□□ -0.4
CACNA1C-206ENST00000399595 RNF217Q8TC41 542 aa12.56□□□□□ -0.4
CACNA1C-206ENST00000399595 MICAL1Q8TDZ2 1067 aa12.56□□□□□ -0.4
CACNA1C-206ENST00000399595 TACO1Q9BSH4 297 aaKnown RBP12.56□□□□□ -0.4
CACNA1C-206ENST00000399595 ADAMTS8Q9UP79 889 aa12.56□□□□□ -0.4
CACNA1C-206ENST00000399595 ADGRL1O94910 1474 aa12.56□□□□□ -0.4
CACNA1C-206ENST00000399595 CCDC172P0C7W6 258 aa12.56□□□□□ -0.4
CACNA1C-206ENST00000399595 KARSQ15046 597 aaKnown RBP12.56□□□□□ -0.4
CACNA1C-206ENST00000399595 TBCAO75347 108 aaKnown RBP12.56□□□□□ -0.4
CACNA1C-206ENST00000399595 ATP5DP30049 168 aa12.56□□□□□ -0.4
CACNA1C-206ENST00000399595 PPP1R7Q15435 360 aa12.56□□□□□ -0.4
CACNA1C-206ENST00000399595 ANO6Q4KMQ2 910 aa12.56□□□□□ -0.4
CACNA1C-206ENST00000399595 CCDC122Q5T0U0 273 aa12.56□□□□□ -0.4
CACNA1C-206ENST00000399595 SDCCAG8Q86SQ7 713 aaPredicted RBP12.56□□□□□ -0.4
CACNA1C-206ENST00000399595 TTLL3Q9Y4R7 772 aa12.56□□□□□ -0.4
CACNA1C-206ENST00000399595 SNRPA1P09661 255 aaKnown RBP12.56□□□□□ -0.4
CACNA1C-206ENST00000399595 ABTB1Q969K4 478 aaPredicted RBP12.56□□□□□ -0.4
CACNA1C-206ENST00000399595 GJB2P29033 226 aa12.56□□□□□ -0.4
CACNA1C-206ENST00000399595 KRT9P35527 623 aa12.56□□□□□ -0.4
CACNA1C-206ENST00000399595 GIMAP6Q6P9H5 292 aa12.56□□□□□ -0.4
CACNA1C-206ENST00000399595 TRIM47Q96LD4 638 aa12.56□□□□□ -0.4
CACNA1C-206ENST00000399595 BOLA2Q9H3K6 86 aa12.56□□□□□ -0.4
CACNA1C-206ENST00000399595 SYF2O95926 243 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-206ENST00000399595 U2AF2P26368 475 aaKnown RBP eCLIP12.55□□□□□ -0.4
CACNA1C-206ENST00000399595 CASP2P42575 452 aa12.55□□□□□ -0.4
CACNA1C-206ENST00000399595 CERS3Q8IU89 383 aa12.55□□□□□ -0.4
CACNA1C-206ENST00000399595 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.55□□□□□ -0.4
CACNA1C-206ENST00000399595 C9orf84Q5VXU9 1444 aa12.55□□□□□ -0.4
CACNA1C-206ENST00000399595 CCDC62Q6P9F0 684 aa12.55□□□□□ -0.4
CACNA1C-206ENST00000399595 C4orf50Q6ZRC1 276 aa12.55□□□□□ -0.4
CACNA1C-206ENST00000399595 STK38LQ9Y2H1 464 aa12.55□□□□□ -0.4
CACNA1C-206ENST00000399595 NOP56O00567 594 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-206ENST00000399595 CCDC186Q7Z3E2 898 aa12.55□□□□□ -0.4
CACNA1C-206ENST00000399595 NME9Q86XW9 330 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms