RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 LSM14AQ8ND56 463 aaKnown RBP7.4□□□□□ -1.22
TRAPPC13-202ENST00000399438 VPS37AQ8NEZ2 397 aa7.4□□□□□ -1.22
TRAPPC13-202ENST00000399438 FRS2Q8WU20 508 aa7.4□□□□□ -1.22
TRAPPC13-202ENST00000399438 GTF3C2Q8WUA4 911 aaPredicted RBP7.4□□□□□ -1.22
TRAPPC13-202ENST00000399438 NGRNQ9NPE2 291 aaKnown RBP7.4□□□□□ -1.22
TRAPPC13-202ENST00000399438 STRCP1A6NGW2 1772 aa7.4□□□□□ -1.22
TRAPPC13-202ENST00000399438 ZBED6P86452 979 aa7.4□□□□□ -1.22
TRAPPC13-202ENST00000399438 MORC3Q14149 939 aa7.4□□□□□ -1.22
TRAPPC13-202ENST00000399438 SULT6B1Q6IMI4 303 aa7.4□□□□□ -1.22
TRAPPC13-202ENST00000399438 HSCBQ8IWL3 235 aa7.4□□□□□ -1.22
TRAPPC13-202ENST00000399438 ZNF830Q96NB3 372 aaPredicted RBP7.4□□□□□ -1.22
TRAPPC13-202ENST00000399438 SETDB2Q96T68 719 aa7.4□□□□□ -1.22
TRAPPC13-202ENST00000399438 ATP8A1Q9Y2Q0 1164 aa7.4□□□□□ -1.22
TRAPPC13-202ENST00000399438 ROBO2Q9HCK4 1378 aa7.4□□□□□ -1.23
TRAPPC13-202ENST00000399438 FAM160A1Q05DH4 1040 aa7.4□□□□□ -1.23
TRAPPC13-202ENST00000399438 MCL1Q07820 350 aa7.4□□□□□ -1.23
TRAPPC13-202ENST00000399438 CCDC70Q6NSX1 233 aa7.4□□□□□ -1.23
TRAPPC13-202ENST00000399438 NBPF10Q6P3W6 841 aaKnown RBP7.4□□□□□ -1.23
TRAPPC13-202ENST00000399438 ANKRD13DQ6ZTN6 518 aa7.4□□□□□ -1.23
TRAPPC13-202ENST00000399438 WDR63Q8IWG1 891 aa7.4□□□□□ -1.23
TRAPPC13-202ENST00000399438 ZNF579Q8NAF0 562 aaKnown RBP7.4□□□□□ -1.23
TRAPPC13-202ENST00000399438 NFATC2IPQ8NCF5 419 aa7.4□□□□□ -1.23
TRAPPC13-202ENST00000399438 GOLGA1Q92805 767 aa7.4□□□□□ -1.23
TRAPPC13-202ENST00000399438 KCNQ2O43526 872 aa7.39□□□□□ -1.23
TRAPPC13-202ENST00000399438 ADGRB2O60241 1585 aa7.39□□□□□ -1.23
TRAPPC13-202ENST00000399438 GEMIN4P57678 1058 aaKnown RBP7.39□□□□□ -1.23
TRAPPC13-202ENST00000399438 DALRD3Q5D0E6 543 aaKnown RBP7.39□□□□□ -1.23
TRAPPC13-202ENST00000399438 C16orf54Q6UWD8 224 aa7.39□□□□□ -1.23
TRAPPC13-202ENST00000399438 ATF7IPQ6VMQ6 1270 aa7.39□□□□□ -1.23
TRAPPC13-202ENST00000399438 LILRB2Q8N423 598 aa7.39□□□□□ -1.23
TRAPPC13-202ENST00000399438 TTC8Q8TAM2 541 aa7.39□□□□□ -1.23
TRAPPC13-202ENST00000399438 APPBP2Q92624 585 aa7.39□□□□□ -1.23
TRAPPC13-202ENST00000399438 DSC3Q14574 896 aa7.39□□□□□ -1.23
TRAPPC13-202ENST00000399438 UVSSAQ2YD98 709 aa7.39□□□□□ -1.23
TRAPPC13-202ENST00000399438 TKFCQ3LXA3 575 aa7.39□□□□□ -1.23
TRAPPC13-202ENST00000399438 ANKRD45Q5TZF3 282 aa7.39□□□□□ -1.23
TRAPPC13-202ENST00000399438 NBPF5PQ86XG9 351 aaPredicted RBP7.39□□□□□ -1.23
TRAPPC13-202ENST00000399438 RBCK1Q9BYM8 510 aa7.39□□□□□ -1.23
TRAPPC13-202ENST00000399438 MBIPQ9NS73 344 aa7.39□□□□□ -1.23
TRAPPC13-202ENST00000399438 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.39□□□□□ -1.23
TRAPPC13-202ENST00000399438 ATF3P18847 181 aa7.39□□□□□ -1.23
TRAPPC13-202ENST00000399438 CHMP4BP1P59074 171 aa7.39□□□□□ -1.23
TRAPPC13-202ENST00000399438 NFX1Q12986 1120 aaKnown RBP7.39□□□□□ -1.23
TRAPPC13-202ENST00000399438 GJC2Q5T442 439 aaPredicted RBP7.39□□□□□ -1.23
TRAPPC13-202ENST00000399438 KSR2Q6VAB6 950 aa7.39□□□□□ -1.23
TRAPPC13-202ENST00000399438 VPS37DQ86XT2 251 aa7.39□□□□□ -1.23
TRAPPC13-202ENST00000399438 CHCHD4Q8N4Q1 142 aa7.39□□□□□ -1.23
TRAPPC13-202ENST00000399438 RWDD1Q9H446 243 aaPredicted RBP7.39□□□□□ -1.23
TRAPPC13-202ENST00000399438 ZNF408Q9H9D4 720 aa7.39□□□□□ -1.23
TRAPPC13-202ENST00000399438 CXXC1Q9P0U4 656 aaPredicted RBP7.39□□□□□ -1.23
TRAPPC13-202ENST00000399438 SEPT3Q9UH03 358 aa7.39□□□□□ -1.23
TRAPPC13-202ENST00000399438 EVLQ9UI08 416 aaPredicted RBP7.39□□□□□ -1.23
TRAPPC13-202ENST00000399438 PRR36Q9H6K5 1346 aa7.38□□□□□ -1.23
TRAPPC13-202ENST00000399438 FMNL1O95466 1100 aaPredicted RBP7.38□□□□□ -1.23
TRAPPC13-202ENST00000399438 RPN1P04843 607 aaKnown RBP7.38□□□□□ -1.23
TRAPPC13-202ENST00000399438 KCNA6P17658 529 aa7.38□□□□□ -1.23
TRAPPC13-202ENST00000399438 ATICP31939 592 aa7.38□□□□□ -1.23
TRAPPC13-202ENST00000399438 TSPAN7P41732 249 aa7.38□□□□□ -1.23
TRAPPC13-202ENST00000399438 IRX3P78415 501 aaPredicted RBP7.38□□□□□ -1.23
TRAPPC13-202ENST00000399438 RNF135Q8IUD6 432 aa7.38□□□□□ -1.23
TRAPPC13-202ENST00000399438 USHBP1Q8N6Y0 703 aa7.38□□□□□ -1.23
TRAPPC13-202ENST00000399438 FAM174AQ8TBP5 190 aa7.38□□□□□ -1.23
TRAPPC13-202ENST00000399438 LRRN4Q8WUT4 740 aa7.38□□□□□ -1.23
TRAPPC13-202ENST00000399438 RABGAP1Q9Y3P9 1069 aa7.38□□□□□ -1.23
TRAPPC13-202ENST00000399438 A0A1W2PRQ8 180 aa7.38□□□□□ -1.23
TRAPPC13-202ENST00000399438 WASLO00401 505 aaPredicted RBP7.38□□□□□ -1.23
TRAPPC13-202ENST00000399438 CTSHP09668 335 aa7.38□□□□□ -1.23
TRAPPC13-202ENST00000399438 PEX19P40855 299 aa7.38□□□□□ -1.23
TRAPPC13-202ENST00000399438 WASHC5Q12768 1159 aa7.38□□□□□ -1.23
TRAPPC13-202ENST00000399438 ALFQ53S48 1182 aa7.38□□□□□ -1.23
TRAPPC13-202ENST00000399438 HSP90AB3PQ58FF7 597 aa7.38□□□□□ -1.23
TRAPPC13-202ENST00000399438 ZC3H12AQ5D1E8 599 aaKnown RBP7.38□□□□□ -1.23
TRAPPC13-202ENST00000399438 TSHZ3Q63HK5 1081 aa7.38□□□□□ -1.23
TRAPPC13-202ENST00000399438 SLC4A10Q6U841 1118 aa7.38□□□□□ -1.23
TRAPPC13-202ENST00000399438 KRT26Q7Z3Y9 468 aa7.38□□□□□ -1.23
TRAPPC13-202ENST00000399438 MYO1HQ8N1T3 1032 aa7.38□□□□□ -1.23
TRAPPC13-202ENST00000399438 COG3Q96JB2 828 aa7.38□□□□□ -1.23
TRAPPC13-202ENST00000399438 FKBP4Q02790 459 aaKnown RBP eCLIP7.37□□□□□ -1.23
TRAPPC13-202ENST00000399438 DPYDQ12882 1025 aa7.37□□□□□ -1.23
TRAPPC13-202ENST00000399438 HLTFQ14527 1009 aaKnown RBP eCLIP7.37□□□□□ -1.23
TRAPPC13-202ENST00000399438 SLC4A8Q2Y0W8 1093 aa7.37□□□□□ -1.23
TRAPPC13-202ENST00000399438 C16orf71Q8IYS4 520 aaPredicted RBP7.37□□□□□ -1.23
TRAPPC13-202ENST00000399438 OTUD7AQ8TE49 926 aaPredicted RBP7.37□□□□□ -1.23
TRAPPC13-202ENST00000399438 NELL1Q92832 810 aa7.37□□□□□ -1.23
TRAPPC13-202ENST00000399438 DEPDC7Q96QD5 511 aa7.37□□□□□ -1.23
TRAPPC13-202ENST00000399438 RBM42Q9BTD8 480 aaKnown RBP7.37□□□□□ -1.23
TRAPPC13-202ENST00000399438 NALCNQ8IZF0 1738 aa7.37□□□□□ -1.23
TRAPPC13-202ENST00000399438 F6X3S4 739 aa7.37□□□□□ -1.23
TRAPPC13-202ENST00000399438 CAPN15O75808 1086 aa7.37□□□□□ -1.23
TRAPPC13-202ENST00000399438 PRPF38BQ5VTL8 546 aaKnown RBP7.37□□□□□ -1.23
TRAPPC13-202ENST00000399438 MSL1Q68DK7 614 aa7.37□□□□□ -1.23
TRAPPC13-202ENST00000399438 KMT5AQ9NQR1 393 aa7.37□□□□□ -1.23
TRAPPC13-202ENST00000399438 SIRPGQ9P1W8 387 aa7.37□□□□□ -1.23
TRAPPC13-202ENST00000399438 ODF2LQ9ULJ1 636 aa7.37□□□□□ -1.23
TRAPPC13-202ENST00000399438 CD163L1Q9NR16 1453 aa7.37□□□□□ -1.23
TRAPPC13-202ENST00000399438 NUTM2BA6NNL0 878 aaPredicted RBP7.37□□□□□ -1.23
TRAPPC13-202ENST00000399438 NUTM2EB1AL46 878 aaPredicted RBP7.37□□□□□ -1.23
TRAPPC13-202ENST00000399438 DTNBO60941 627 aa7.37□□□□□ -1.23
TRAPPC13-202ENST00000399438 PSMC1P62191 440 aaKnown RBP7.37□□□□□ -1.23
TRAPPC13-202ENST00000399438 NUTM2AQ8IVF1 878 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms