RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 IQUBQ8NA54 791 aa14.89□□□□□ -0.03
ITSN1-208ENST00000399349 PKD2L1Q9P0L9 805 aa14.89□□□□□ -0.03
ITSN1-208ENST00000399349 CUL7Q14999 1698 aa14.89□□□□□ -0.03
ITSN1-208ENST00000399349 RNMTO43148 476 aaKnown RBP14.89□□□□□ -0.03
ITSN1-208ENST00000399349 HOXC9P31274 260 aa14.89□□□□□ -0.03
ITSN1-208ENST00000399349 KRT83P78385 493 aa14.89□□□□□ -0.03
ITSN1-208ENST00000399349 ZNF804AQ7Z570 1209 aa14.89□□□□□ -0.03
ITSN1-208ENST00000399349 DDX21Q9NR30 783 aaKnown RBP eCLIP14.89□□□□□ -0.03
ITSN1-208ENST00000399349 NPATQ14207 1427 aa14.89□□□□□ -0.03
ITSN1-208ENST00000399349 GAS2L3Q86XJ1 694 aa14.89□□□□□ -0.03
ITSN1-208ENST00000399349 NEK11Q8NG66 645 aa14.89□□□□□ -0.03
ITSN1-208ENST00000399349 ERCC3P19447 782 aa14.88□□□□□ -0.03
ITSN1-208ENST00000399349 GIGYF2Q6Y7W6 1299 aaKnown RBP14.88□□□□□ -0.03
ITSN1-208ENST00000399349 BRAPQ7Z569 592 aa14.88□□□□□ -0.03
ITSN1-208ENST00000399349 VGLL3A8MV65 326 aa14.88□□□□□ -0.03
ITSN1-208ENST00000399349 SAP30BPQ9UHR5 308 aaKnown RBP14.88□□□□□ -0.03
ITSN1-208ENST00000399349 UHRF1BP1LA0JNW5 1464 aa14.88□□□□□ -0.03
ITSN1-208ENST00000399349 PNMA6EA0A0J9YXQ4 647 aa14.88□□□□□ -0.03
ITSN1-208ENST00000399349 GNAT2P19087 354 aa14.88□□□□□ -0.03
ITSN1-208ENST00000399349 EIF6P56537 245 aaKnown RBP14.88□□□□□ -0.03
ITSN1-208ENST00000399349 RAPGEF1Q13905 1077 aa14.88□□□□□ -0.03
ITSN1-208ENST00000399349 VPS16Q9H269 839 aa14.88□□□□□ -0.03
ITSN1-208ENST00000399349 KCNA6P17658 529 aa14.88□□□□□ -0.03
ITSN1-208ENST00000399349 MYL5Q02045 173 aa14.88□□□□□ -0.03
ITSN1-208ENST00000399349 GRM1Q13255 1194 aa14.88□□□□□ -0.03
ITSN1-208ENST00000399349 DCAF17Q5H9S7 520 aaPredicted RBP14.88□□□□□ -0.03
ITSN1-208ENST00000399349 GSTA5Q7RTV2 222 aa14.88□□□□□ -0.03
ITSN1-208ENST00000399349 DCAF5Q96JK2 942 aa14.88□□□□□ -0.03
ITSN1-208ENST00000399349 MYL10Q9BUA6 226 aa14.88□□□□□ -0.03
ITSN1-208ENST00000399349 VPS18Q9P253 973 aa14.88□□□□□ -0.03
ITSN1-208ENST00000399349 PLCH2O75038 1416 aa14.88□□□□□ -0.03
ITSN1-208ENST00000399349 FAM13AO94988 1023 aa14.87□□□□□ -0.03
ITSN1-208ENST00000399349 LDHBP07195 334 aaKnown RBP14.87□□□□□ -0.03
ITSN1-208ENST00000399349 U2AF2P26368 475 aaKnown RBP eCLIP14.87□□□□□ -0.032e-6■■■□□ 14.6
ITSN1-208ENST00000399349 CCDC25Q86WR0 208 aa14.87□□□□□ -0.03
ITSN1-208ENST00000399349 TMEM87AQ8NBN3 555 aa14.87□□□□□ -0.03
ITSN1-208ENST00000399349 RIMS2Q9UQ26 1411 aa14.87□□□□□ -0.03
ITSN1-208ENST00000399349 HS2ST1Q7LGA3 356 aa14.87□□□□□ -0.03
ITSN1-208ENST00000399349 CEP63Q96MT8 703 aa14.87□□□□□ -0.03
ITSN1-208ENST00000399349 UIMC1Q96RL1 719 aa14.87□□□□□ -0.03
ITSN1-208ENST00000399349 IQCGQ9H095 443 aaKnown RBP14.87□□□□□ -0.03
ITSN1-208ENST00000399349 LGR6Q9HBX8 967 aa14.87□□□□□ -0.03
ITSN1-208ENST00000399349 RTL9Q8NET4 1388 aa14.87□□□□□ -0.03
ITSN1-208ENST00000399349 SLC27A2O14975 620 aa14.87□□□□□ -0.03
ITSN1-208ENST00000399349 ARMT1Q9H993 441 aa14.87□□□□□ -0.03
ITSN1-208ENST00000399349 RPS6KB1P23443 525 aa14.87□□□□□ -0.03
ITSN1-208ENST00000399349 FAM160A1Q05DH4 1040 aa14.87□□□□□ -0.03
ITSN1-208ENST00000399349 CCDC50Q8IVM0 306 aa14.87□□□□□ -0.03
ITSN1-208ENST00000399349 GTF3C6Q969F1 213 aa14.87□□□□□ -0.03
ITSN1-208ENST00000399349 USP37Q86T82 979 aa14.86□□□□□ -0.03
ITSN1-208ENST00000399349 SNX14Q9Y5W7 946 aa14.86□□□□□ -0.03
ITSN1-208ENST00000399349 PPARDQ03181 441 aa14.86□□□□□ -0.03
ITSN1-208ENST00000399349 CCDC122Q5T0U0 273 aa14.86□□□□□ -0.03
ITSN1-208ENST00000399349 ZNF354CQ86Y25 554 aa14.86□□□□□ -0.03
ITSN1-208ENST00000399349 SELENOSQ9BQE4 189 aa14.86□□□□□ -0.03
ITSN1-208ENST00000399349 GNA11P29992 359 aa14.86□□□□□ -0.03
ITSN1-208ENST00000399349 RNASE9P60153 205 aaKnown RBP14.86□□□□□ -0.03
ITSN1-208ENST00000399349 HSPA4P34932 840 aa14.86□□□□□ -0.03
ITSN1-208ENST00000399349 TNNI3KQ59H18 835 aa14.86□□□□□ -0.03
ITSN1-208ENST00000399349 CCDC24Q8N4L8 307 aa14.86□□□□□ -0.03
ITSN1-208ENST00000399349 BAG1Q99933 345 aaPredicted RBP14.86□□□□□ -0.03
ITSN1-208ENST00000399349 FPGT-TNNI3KV9GXZ4 949 aa14.86□□□□□ -0.03
ITSN1-208ENST00000399349 EYA2O00167 538 aa14.85□□□□□ -0.03
ITSN1-208ENST00000399349 IMPG2Q9BZV3 1241 aa14.85□□□□□ -0.03
ITSN1-208ENST00000399349 TRAF5O00463 557 aa14.85□□□□□ -0.03
ITSN1-208ENST00000399349 ITGA6P23229 1130 aa14.85□□□□□ -0.03
ITSN1-208ENST00000399349 ARL1P40616 181 aaPredicted RBP14.85□□□□□ -0.03
ITSN1-208ENST00000399349 ZNF790Q6PG37 636 aa14.85□□□□□ -0.03
ITSN1-208ENST00000399349 RTCBQ9Y3I0 505 aaKnown RBP14.85□□□□□ -0.03
ITSN1-208ENST00000399349 V9GY48 417 aaPredicted RBP14.85□□□□□ -0.03
ITSN1-208ENST00000399349 BICDL2A1A5D9 508 aa14.85□□□□□ -0.03
ITSN1-208ENST00000399349 HSPA2P54652 639 aa14.85□□□□□ -0.03
ITSN1-208ENST00000399349 GPCPD1Q9NPB8 672 aa14.85□□□□□ -0.03
ITSN1-208ENST00000399349 HDAC9Q9UKV0 1011 aa14.85□□□□□ -0.03
ITSN1-208ENST00000399349 GADD45BO75293 160 aaPredicted RBP14.85□□□□□ -0.03
ITSN1-208ENST00000399349 A1BGP04217 495 aa14.85□□□□□ -0.03
ITSN1-208ENST00000399349 MXRA7P84157 204 aa14.85□□□□□ -0.03
ITSN1-208ENST00000399349 RAD50Q92878 1312 aa14.85□□□□□ -0.03
ITSN1-208ENST00000399349 URB2Q14146 1524 aaKnown RBP14.85□□□□□ -0.03
ITSN1-208ENST00000399349 TAF5LO75529 589 aa14.84□□□□□ -0.03
ITSN1-208ENST00000399349 CCDC6Q16204 474 aa14.84□□□□□ -0.03
ITSN1-208ENST00000399349 PIK3AP1Q6ZUJ8 805 aa14.84□□□□□ -0.03
ITSN1-208ENST00000399349 ATP10BO94823 1461 aa14.84□□□□□ -0.03
ITSN1-208ENST00000399349 hCG_1642624A0A1W2PR95 340 aa14.84□□□□□ -0.03
ITSN1-208ENST00000399349 PHKBQ93100 1093 aa14.84□□□□□ -0.03
ITSN1-208ENST00000399349 FERMT1Q9BQL6 677 aa14.84□□□□□ -0.03
ITSN1-208ENST00000399349 TFCP2L1Q9NZI6 479 aa14.84□□□□□ -0.03
ITSN1-208ENST00000399349 UBAP1LF5GYI3 381 aa14.84□□□□□ -0.03
ITSN1-208ENST00000399349 FCHSD1Q86WN1 690 aa14.84□□□□□ -0.03
ITSN1-208ENST00000399349 CTNND2Q9UQB3 1225 aa14.84□□□□□ -0.03
ITSN1-208ENST00000399349 ATP6V0A2Q9Y487 856 aa14.84□□□□□ -0.03
ITSN1-208ENST00000399349 TRAPPC8Q9Y2L5 1435 aa14.84□□□□□ -0.03
ITSN1-208ENST00000399349 KIF4AO95239 1232 aa14.84□□□□□ -0.03
ITSN1-208ENST00000399349 EDC3Q96F86 508 aaKnown RBP14.84□□□□□ -0.03
ITSN1-208ENST00000399349 RASAL2Q9UJF2 1139 aa14.84□□□□□ -0.03
ITSN1-208ENST00000399349 POLR2DO15514 142 aaKnown RBP14.83□□□□□ -0.03
ITSN1-208ENST00000399349 TBC1D8BQ0IIM8 1120 aa14.83□□□□□ -0.03
ITSN1-208ENST00000399349 IGSF22Q8N9C0 903 aa14.83□□□□□ -0.03
ITSN1-208ENST00000399349 KCNH3Q9ULD8 1083 aa14.83□□□□□ -0.03
ITSN1-208ENST00000399349 TRIM35Q9UPQ4 493 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms