RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 PTPN14Q15678 1187 aa22.71■■□□□ 1.23
COL13A1-205ENST00000398978 SLC9C2Q5TAH2 1124 aa22.71■■□□□ 1.23
COL13A1-205ENST00000398978 MICU3Q86XE3 530 aa22.71■■□□□ 1.23
COL13A1-205ENST00000398978 TBC1D10CQ8IV04 446 aa22.71■■□□□ 1.23
COL13A1-205ENST00000398978 APPBP2Q92624 585 aa22.71■■□□□ 1.23
COL13A1-205ENST00000398978 GREM2Q9H772 168 aa22.71■■□□□ 1.23
COL13A1-205ENST00000398978 NWD2Q9ULI1 1742 aa22.71■■□□□ 1.23
COL13A1-205ENST00000398978 TJP1Q07157 1748 aa22.71■■□□□ 1.23
COL13A1-205ENST00000398978 ISCA1Q9BUE6 129 aa22.71■■□□□ 1.23
COL13A1-205ENST00000398978 NEDD4P46934 1319 aa22.7■■□□□ 1.22
COL13A1-205ENST00000398978 ZSCAN20P17040 1043 aaPredicted RBP22.7■■□□□ 1.22
COL13A1-205ENST00000398978 LDHAL6AQ6ZMR3 332 aa22.7■■□□□ 1.22
COL13A1-205ENST00000398978 SLC3A2P08195 630 aaKnown RBP22.7■■□□□ 1.22
COL13A1-205ENST00000398978 PFKFB1P16118 471 aa22.7■■□□□ 1.22
COL13A1-205ENST00000398978 HSP90AA4PQ58FG1 418 aa22.7■■□□□ 1.22
COL13A1-205ENST00000398978 KIF1AQ12756 1690 aa22.7■■□□□ 1.22
COL13A1-205ENST00000398978 TNS3Q68CZ2 1445 aa22.69■■□□□ 1.22
COL13A1-205ENST00000398978 B4E1Z4 1266 aa22.69■■□□□ 1.22
COL13A1-205ENST00000398978 CLIC6Q96NY7 704 aa22.69■■□□□ 1.22
COL13A1-205ENST00000398978 ZNF215Q9UL58 517 aaPredicted RBP22.69■■□□□ 1.22
COL13A1-205ENST00000398978 ATP1A3P13637 1013 aa22.69■■□□□ 1.22
COL13A1-205ENST00000398978 KIF23Q02241 960 aaPredicted RBP22.69■■□□□ 1.22
COL13A1-205ENST00000398978 GOLGA8FQ08AF8 430 aa22.69■■□□□ 1.22
COL13A1-205ENST00000398978 GOLGA8DPQ0D2H9 430 aa22.69■■□□□ 1.22
COL13A1-205ENST00000398978 SPECC1Q5M775 1068 aa22.68■■□□□ 1.22
COL13A1-205ENST00000398978 ANO1Q5XXA6 986 aa22.68■■□□□ 1.22
COL13A1-205ENST00000398978 AKAP2Q9Y2D5 859 aa22.68■■□□□ 1.22
COL13A1-205ENST00000398978 CDC27P30260 824 aa22.68■■□□□ 1.22
COL13A1-205ENST00000398978 NAT10Q9H0A0 1025 aaKnown RBP22.68■■□□□ 1.22
COL13A1-205ENST00000398978 PIH1D3Q9NQM4 214 aaKnown RBP22.68■■□□□ 1.22
COL13A1-205ENST00000398978 CNNM1Q9NRU3 951 aa22.68■■□□□ 1.22
COL13A1-205ENST00000398978 ITGA6P23229 1130 aa22.68■■□□□ 1.22
COL13A1-205ENST00000398978 ALG1Q9BT22 464 aa22.68■■□□□ 1.22
COL13A1-205ENST00000398978 ERVV-2B6SEH9 535 aa22.67■■□□□ 1.22
COL13A1-205ENST00000398978 GNL2Q13823 731 aaKnown RBP22.67■■□□□ 1.22
COL13A1-205ENST00000398978 AXDND1Q5T1B0 1012 aaPredicted RBP22.67■■□□□ 1.22
COL13A1-205ENST00000398978 ATL3Q6DD88 541 aa22.67■■□□□ 1.22
COL13A1-205ENST00000398978 CCAR2Q8N163 923 aaKnown RBP22.67■■□□□ 1.22
COL13A1-205ENST00000398978 CCDC82Q8N4S0 544 aa22.67■■□□□ 1.22
COL13A1-205ENST00000398978 KCNG4Q8TDN1 519 aa22.67■■□□□ 1.22
COL13A1-205ENST00000398978 WDR17Q8IZU2 1322 aa22.67■■□□□ 1.22
COL13A1-205ENST00000398978 EVCP57679 992 aa22.66■■□□□ 1.22
COL13A1-205ENST00000398978 RBM6P78332 1123 aaKnown RBP22.66■■□□□ 1.22
COL13A1-205ENST00000398978 ARMCX5Q6P1M9 558 aa22.66■■□□□ 1.22
COL13A1-205ENST00000398978 WWC3Q9ULE0 1092 aa22.66■■□□□ 1.22
COL13A1-205ENST00000398978 IL2RBP14784 551 aa22.66■■□□□ 1.22
COL13A1-205ENST00000398978 POLR3EQ9NVU0 708 aa22.66■■□□□ 1.22
COL13A1-205ENST00000398978 PAXBP1Q9Y5B6 917 aa22.66■■□□□ 1.22
COL13A1-205ENST00000398978 A0A1W2PQ27 194 aa22.66■■□□□ 1.22
COL13A1-205ENST00000398978 A0A1W2PQ64 194 aa22.66■■□□□ 1.22
COL13A1-205ENST00000398978 A0A1W2PQD8 194 aa22.66■■□□□ 1.22
COL13A1-205ENST00000398978 METAP2P50579 478 aaKnown RBP eCLIP22.66■■□□□ 1.22
COL13A1-205ENST00000398978 TMOD3Q9NYL9 352 aa22.66■■□□□ 1.22
COL13A1-205ENST00000398978 ADAMTSL3P82987 1691 aa22.66■■□□□ 1.22
COL13A1-205ENST00000398978 DHX16O60231 1041 aaKnown RBP22.65■■□□□ 1.22
COL13A1-205ENST00000398978 PHKA1P46020 1223 aa22.65■■□□□ 1.22
COL13A1-205ENST00000398978 HSPA2P54652 639 aa22.65■■□□□ 1.22
COL13A1-205ENST00000398978 TRDNQ13061 729 aa22.65■■□□□ 1.22
COL13A1-205ENST00000398978 PNOCQ13519 176 aa22.65■■□□□ 1.22
COL13A1-205ENST00000398978 KCPQ6ZWJ8 1503 aa22.65■■□□□ 1.22
COL13A1-205ENST00000398978 KIF6Q6ZMV9 814 aa22.65■■□□□ 1.22
COL13A1-205ENST00000398978 NYAP1Q6ZVC0 841 aa22.65■■□□□ 1.22
COL13A1-205ENST00000398978 VPS37DQ86XT2 251 aa22.65■■□□□ 1.22
COL13A1-205ENST00000398978 ATG3Q9NT62 314 aa22.65■■□□□ 1.22
COL13A1-205ENST00000398978 NUP188Q5SRE5 1749 aa22.65■■□□□ 1.22
COL13A1-205ENST00000398978 ZFYP08048 801 aaPredicted RBP22.64■■□□□ 1.22
COL13A1-205ENST00000398978 NFXL1Q6ZNB6 911 aa22.64■■□□□ 1.22
COL13A1-205ENST00000398978 ZNF532Q9HCE3 1301 aa22.64■■□□□ 1.22
COL13A1-205ENST00000398978 LAMB4A4D0S4 1761 aa22.64■■□□□ 1.22
COL13A1-205ENST00000398978 KRT40Q6A162 431 aa22.64■■□□□ 1.21
COL13A1-205ENST00000398978 PKD1L3Q7Z443 1732 aa22.64■■□□□ 1.21
COL13A1-205ENST00000398978 YEATS4O95619 227 aa22.63■■□□□ 1.21
COL13A1-205ENST00000398978 EVA1CP58658 441 aa22.63■■□□□ 1.21
COL13A1-205ENST00000398978 CTDSPL2Q05D32 466 aa22.63■■□□□ 1.21
COL13A1-205ENST00000398978 CADPS2Q86UW7 1296 aa22.63■■□□□ 1.21
COL13A1-205ENST00000398978 CMTR1Q8N1G2 835 aaKnown RBP22.63■■□□□ 1.21
COL13A1-205ENST00000398978 LRRN4CLQ8ND94 238 aa22.63■■□□□ 1.21
COL13A1-205ENST00000398978 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.63■■□□□ 1.21
COL13A1-205ENST00000398978 DPF2Q92785 391 aa22.63■■□□□ 1.21
COL13A1-205ENST00000398978 LRRFIP1Q32MZ4 808 aaKnown RBP22.63■■□□□ 1.21
COL13A1-205ENST00000398978 E4F1Q66K89 784 aaPredicted RBP22.63■■□□□ 1.21
COL13A1-205ENST00000398978 ZKSCAN3Q9BRR0 538 aa22.63■■□□□ 1.21
COL13A1-205ENST00000398978 RIPOR2Q9Y4F9 1068 aa22.63■■□□□ 1.21
COL13A1-205ENST00000398978 NCAPHQ15003 741 aa22.63■■□□□ 1.21
COL13A1-205ENST00000398978 TTLL11Q8NHH1 800 aa22.63■■□□□ 1.21
COL13A1-205ENST00000398978 ANGEL1Q9UNK9 670 aaKnown RBP22.63■■□□□ 1.21
COL13A1-205ENST00000398978 MYO5AQ9Y4I1 1855 aaKnown RBP22.62■■□□□ 1.21
COL13A1-205ENST00000398978 PCCAP05165 728 aaPredicted RBP22.62■■□□□ 1.21
COL13A1-205ENST00000398978 ADD2P35612 726 aa22.62■■□□□ 1.21
COL13A1-205ENST00000398978 SYKP43405 635 aa22.62■■□□□ 1.21
COL13A1-205ENST00000398978 ELF2Q15723 593 aa22.62■■□□□ 1.21
COL13A1-205ENST00000398978 ZBTB38Q8NAP3 1195 aaPredicted RBP22.62■■□□□ 1.21
COL13A1-205ENST00000398978 FOXN1O15353 648 aa22.62■■□□□ 1.21
COL13A1-205ENST00000398978 RRP12Q5JTH9 1297 aaKnown RBP22.62■■□□□ 1.21
COL13A1-205ENST00000398978 SHC4Q6S5L8 630 aa22.62■■□□□ 1.21
COL13A1-205ENST00000398978 PIGBQ92521 554 aa22.62■■□□□ 1.21
COL13A1-205ENST00000398978 ABCC6O95255 1503 aa22.62■■□□□ 1.21
COL13A1-205ENST00000398978 A0A0G2JS52 829 aa22.61■■□□□ 1.21
COL13A1-205ENST00000398978 NLRP12P59046 1061 aa22.61■■□□□ 1.21
COL13A1-205ENST00000398978 BRAPQ7Z569 592 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms