RNA–Protein interactions for RNA: ENST00000398959.2

SRMP1-201, Transcript of spermidine synthase pseudogene 1, humanhuman

BASIC

Gene SRMP1, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP1-201ENST00000398959 MYH2Q9UKX2 1941 aa13.98□□□□□ -0.17
SRMP1-201ENST00000398959 USP2O75604 605 aaPredicted RBP13.97□□□□□ -0.17
SRMP1-201ENST00000398959 CRKP46108 304 aa13.97□□□□□ -0.17
SRMP1-201ENST00000398959 TNNI2P48788 182 aa13.97□□□□□ -0.17
SRMP1-201ENST00000398959 FBXO46Q6PJ61 603 aaPredicted RBP13.97□□□□□ -0.17
SRMP1-201ENST00000398959 DZIP1LQ8IYY4 767 aaKnown RBP13.97□□□□□ -0.17
SRMP1-201ENST00000398959 ANKRD44Q8N8A2 993 aa13.97□□□□□ -0.17
SRMP1-201ENST00000398959 TCP10L2B9ZVM9 353 aa13.96□□□□□ -0.17
SRMP1-201ENST00000398959 PDE8BO95263 885 aa13.96□□□□□ -0.17
SRMP1-201ENST00000398959 OTUD7BQ6GQQ9 843 aa13.96□□□□□ -0.17
SRMP1-201ENST00000398959 FBXO33Q7Z6M2 555 aa13.96□□□□□ -0.17
SRMP1-201ENST00000398959 KLHDC4Q8TBB5 520 aa13.96□□□□□ -0.17
SRMP1-201ENST00000398959 TBC1D22AQ8WUA7 517 aa13.96□□□□□ -0.17
SRMP1-201ENST00000398959 SSH1Q8WYL5 1049 aa13.96□□□□□ -0.17
SRMP1-201ENST00000398959 IGF2BP3O00425 579 aaKnown RBP eCLIP13.95□□□□□ -0.18
SRMP1-201ENST00000398959 ELP3Q9H9T3 547 aa13.95□□□□□ -0.18
SRMP1-201ENST00000398959 CENPFP49454 3210 aa13.94□□□□□ -0.18
SRMP1-201ENST00000398959 GJA5P36382 358 aa13.94□□□□□ -0.18
SRMP1-201ENST00000398959 VGLL2Q8N8G2 317 aa13.94□□□□□ -0.18
SRMP1-201ENST00000398959 TEKT1Q969V4 418 aa13.94□□□□□ -0.18
SRMP1-201ENST00000398959 OPTNQ96CV9 577 aa13.94□□□□□ -0.18
SRMP1-201ENST00000398959 TMEM39BQ9GZU3 492 aa13.94□□□□□ -0.18
SRMP1-201ENST00000398959 USP44Q9H0E7 712 aa13.94□□□□□ -0.18
SRMP1-201ENST00000398959 DOCK2Q92608 1830 aa13.94□□□□□ -0.18
SRMP1-201ENST00000398959 MAST3O60307 1309 aa13.93□□□□□ -0.18
SRMP1-201ENST00000398959 IFIT1P09914 478 aaKnown RBP13.93□□□□□ -0.18
SRMP1-201ENST00000398959 BCAMP50895 628 aa13.93□□□□□ -0.18
SRMP1-201ENST00000398959 HDLBPQ00341 1268 aaKnown RBP13.93□□□□□ -0.18
SRMP1-201ENST00000398959 SLFN5Q08AF3 891 aa13.93□□□□□ -0.18
SRMP1-201ENST00000398959 PUM3Q15397 648 aaKnown RBP13.93□□□□□ -0.18
SRMP1-201ENST00000398959 GRIK5Q16478 980 aa13.93□□□□□ -0.18
SRMP1-201ENST00000398959 ALDH1L2Q3SY69 923 aa13.93□□□□□ -0.18
SRMP1-201ENST00000398959 CDAN1Q8IWY9 1227 aa13.93□□□□□ -0.18
SRMP1-201ENST00000398959 TEPSINQ96N21 525 aa13.93□□□□□ -0.18
SRMP1-201ENST00000398959 SMC4Q9NTJ3 1288 aa13.93□□□□□ -0.18
SRMP1-201ENST00000398959 TMOD2Q9NZR1 351 aa13.93□□□□□ -0.18
SRMP1-201ENST00000398959 TRIM17Q9Y577 477 aa13.93□□□□□ -0.18
SRMP1-201ENST00000398959 CSADQ9Y600 493 aa13.93□□□□□ -0.18
SRMP1-201ENST00000398959 CRHR2Q13324 411 aa13.92□□□□□ -0.18
SRMP1-201ENST00000398959 ERO1AQ96HE7 468 aa13.92□□□□□ -0.18
SRMP1-201ENST00000398959 ZSWIM8A7E2V4 1837 aa13.92□□□□□ -0.18
SRMP1-201ENST00000398959 KIF16BQ96L93 1317 aa13.91□□□□□ -0.18
SRMP1-201ENST00000398959 HTTP42858 3142 aa13.91□□□□□ -0.18
SRMP1-201ENST00000398959 SLC34A2O95436 690 aa13.91□□□□□ -0.18
SRMP1-201ENST00000398959 SLC5A1P13866 664 aa13.91□□□□□ -0.18
SRMP1-201ENST00000398959 CACNB3P54284 484 aa13.91□□□□□ -0.18
SRMP1-201ENST00000398959 MAP3K9P80192 1104 aa13.91□□□□□ -0.18
SRMP1-201ENST00000398959 VGLL4Q14135 290 aa13.91□□□□□ -0.18
SRMP1-201ENST00000398959 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.91□□□□□ -0.18
SRMP1-201ENST00000398959 OTOP1Q7RTM1 612 aa13.91□□□□□ -0.18
SRMP1-201ENST00000398959 CD99L2Q8TCZ2 262 aa13.91□□□□□ -0.18
SRMP1-201ENST00000398959 SUGT1Q9Y2Z0 365 aa13.91□□□□□ -0.18
SRMP1-201ENST00000398959 TESPA1A2RU30 521 aaPredicted RBP13.9□□□□□ -0.18
SRMP1-201ENST00000398959 EYA2O00167 538 aa13.9□□□□□ -0.18
SRMP1-201ENST00000398959 FGFR2P21802 821 aa13.9□□□□□ -0.18
SRMP1-201ENST00000398959 GTF2A2P52657 109 aa13.9□□□□□ -0.18
SRMP1-201ENST00000398959 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.9□□□□□ -0.18
SRMP1-201ENST00000398959 CNKSR2Q8WXI2 1034 aa13.9□□□□□ -0.18
SRMP1-201ENST00000398959 LPIN2Q92539 896 aa13.9□□□□□ -0.18
SRMP1-201ENST00000398959 HOOK2Q96ED9 719 aa13.9□□□□□ -0.18
SRMP1-201ENST00000398959 CDCA7LQ96GN5 454 aa13.9□□□□□ -0.18
SRMP1-201ENST00000398959 ZDHHC15Q96MV8 337 aa13.9□□□□□ -0.18
SRMP1-201ENST00000398959 PTPN18Q99952 460 aa13.9□□□□□ -0.18
SRMP1-201ENST00000398959 MRIQ9BWK5 157 aa13.9□□□□□ -0.18
SRMP1-201ENST00000398959 MGAMO43451 1857 aa13.9□□□□□ -0.18
SRMP1-201ENST00000398959 CCL15-CCL14A0A0B4J2E2 113 aa13.89□□□□□ -0.19
SRMP1-201ENST00000398959 UBTFL1P0CB47 393 aaPredicted RBP13.89□□□□□ -0.19
SRMP1-201ENST00000398959 RFX5P48382 616 aaPredicted RBP13.89□□□□□ -0.19
SRMP1-201ENST00000398959 SP3Q02447 781 aa13.89□□□□□ -0.19
SRMP1-201ENST00000398959 CCL15Q16663 113 aa13.89□□□□□ -0.19
SRMP1-201ENST00000398959 HHIPL2Q6UWX4 724 aa13.89□□□□□ -0.19
SRMP1-201ENST00000398959 FAM83AQ86UY5 434 aa13.89□□□□□ -0.19
SRMP1-201ENST00000398959 WDR66Q8TBY9 1149 aa13.89□□□□□ -0.19
SRMP1-201ENST00000398959 OTUD5Q96G74 571 aa13.89□□□□□ -0.19
SRMP1-201ENST00000398959 MS4A4AQ96JQ5 239 aa13.89□□□□□ -0.19
SRMP1-201ENST00000398959 SIL1Q9H173 461 aa13.89□□□□□ -0.19
SRMP1-201ENST00000398959 KIAA0100Q14667 2235 aaKnown RBP13.88□□□□□ -0.19
SRMP1-201ENST00000398959 TAF1CQ15572 869 aaPredicted RBP13.88□□□□□ -0.19
SRMP1-201ENST00000398959 FKBP1CQ5VVH2 108 aa13.88□□□□□ -0.19
SRMP1-201ENST00000398959 APOBEC3HQ6NTF7 200 aaKnown RBP13.88□□□□□ -0.19
SRMP1-201ENST00000398959 WRNIP1Q96S55 665 aa13.88□□□□□ -0.19
SRMP1-201ENST00000398959 EFCC1Q9HA90 598 aa13.88□□□□□ -0.19
SRMP1-201ENST00000398959 ZFYVE28Q9HCC9 887 aa13.88□□□□□ -0.19
SRMP1-201ENST00000398959 PTPN22Q9Y2R2 807 aa13.88□□□□□ -0.19
SRMP1-201ENST00000398959 PTPRFP10586 1907 aa13.88□□□□□ -0.19
SRMP1-201ENST00000398959 RPAP1Q9BWH6 1393 aaPredicted RBP13.87□□□□□ -0.19
SRMP1-201ENST00000398959 WDHD1O75717 1129 aaPredicted RBP13.87□□□□□ -0.19
SRMP1-201ENST00000398959 ATP2B3Q16720 1220 aa13.87□□□□□ -0.19
SRMP1-201ENST00000398959 PRPF38BQ5VTL8 546 aaKnown RBP13.87□□□□□ -0.19
SRMP1-201ENST00000398959 DCAF15Q66K64 600 aa13.87□□□□□ -0.19
SRMP1-201ENST00000398959 INTS3Q68E01 1043 aaKnown RBP13.87□□□□□ -0.19
SRMP1-201ENST00000398959 ATG9AQ7Z3C6 839 aa13.87□□□□□ -0.19
SRMP1-201ENST00000398959 BRI3BPQ8WY22 251 aa13.87□□□□□ -0.19
SRMP1-201ENST00000398959 GNL3LQ9NVN8 582 aaKnown RBP13.87□□□□□ -0.19
SRMP1-201ENST00000398959 CEP126Q9P2H0 1117 aa13.87□□□□□ -0.19
SRMP1-201ENST00000398959 NOB1Q9ULX3 412 aaKnown RBP13.87□□□□□ -0.19
SRMP1-201ENST00000398959 HDAC5Q9UQL6 1122 aa13.87□□□□□ -0.19
SRMP1-201ENST00000398959 ATAD5Q96QE3 1844 aa13.86□□□□□ -0.19
SRMP1-201ENST00000398959 SPDYE5A6NIY4 337 aa13.86□□□□□ -0.19
SRMP1-201ENST00000398959 CT47B1P0C2W7 299 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms