RNA–Protein interactions for RNA: ENST00000398958.6

RCC1-204, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RCC1, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-204ENST00000398958 NRBP1Q9UHY1 535 aa13.23□□□□□ -0.29
RCC1-204ENST00000398958 U3KPZ7 1027 aaPredicted RBP13.23□□□□□ -0.29
RCC1-204ENST00000398958 E7EWF7 191 aa13.22□□□□□ -0.29
RCC1-204ENST00000398958 RNF113AO15541 343 aaKnown RBP13.22□□□□□ -0.29
RCC1-204ENST00000398958 MAP3K11Q16584 847 aa13.22□□□□□ -0.29
RCC1-204ENST00000398958 SLC9C2Q5TAH2 1124 aa13.22□□□□□ -0.29
RCC1-204ENST00000398958 TAF3Q5VWG9 929 aa13.22□□□□□ -0.29
RCC1-204ENST00000398958 NBPF5PQ86XG9 351 aaPredicted RBP13.22□□□□□ -0.29
RCC1-204ENST00000398958 GJB4Q9NTQ9 266 aa13.22□□□□□ -0.29
RCC1-204ENST00000398958 TYRO3Q06418 890 aa13.22□□□□□ -0.29
RCC1-204ENST00000398958 ZMYM1Q5SVZ6 1142 aa13.22□□□□□ -0.29
RCC1-204ENST00000398958 BARGINQ6ZT62 677 aa13.22□□□□□ -0.29
RCC1-204ENST00000398958 ARHGEF1Q92888 912 aaKnown RBP13.22□□□□□ -0.29
RCC1-204ENST00000398958 NUP62CLQ9H1M0 184 aa13.22□□□□□ -0.29
RCC1-204ENST00000398958 MRVI1Q9Y6F6 885 aa13.22□□□□□ -0.29
RCC1-204ENST00000398958 TJP1Q07157 1748 aa13.22□□□□□ -0.29
RCC1-204ENST00000398958 PDE8AO60658 829 aa13.21□□□□□ -0.29
RCC1-204ENST00000398958 GABPB1Q06547 395 aaPredicted RBP13.21□□□□□ -0.29
RCC1-204ENST00000398958 PDE4CQ08493 712 aa13.21□□□□□ -0.29
RCC1-204ENST00000398958 SYCP1Q15431 976 aa13.21□□□□□ -0.29
RCC1-204ENST00000398958 KLHL34Q8N239 644 aa13.21□□□□□ -0.29
RCC1-204ENST00000398958 CCDC112Q8NEF3 446 aa13.21□□□□□ -0.29
RCC1-204ENST00000398958 TRIM5Q9C035 493 aa13.21□□□□□ -0.29
RCC1-204ENST00000398958 NWD2Q9ULI1 1742 aa13.21□□□□□ -0.29
RCC1-204ENST00000398958 TAF1P21675 1872 aa13.21□□□□□ -0.29
RCC1-204ENST00000398958 A0A087WWV3 80 aa13.21□□□□□ -0.29
RCC1-204ENST00000398958 H3BQV1 296 aa13.21□□□□□ -0.29
RCC1-204ENST00000398958 IFFO2Q5TF58 517 aa13.21□□□□□ -0.29
RCC1-204ENST00000398958 OLFM4Q6UX06 510 aa13.21□□□□□ -0.29
RCC1-204ENST00000398958 GTF3C6Q969F1 213 aa13.21□□□□□ -0.29
RCC1-204ENST00000398958 PIH1D3Q9NQM4 214 aaKnown RBP13.21□□□□□ -0.29
RCC1-204ENST00000398958 HMG20BQ9P0W2 317 aa13.21□□□□□ -0.29
RCC1-204ENST00000398958 LAMB4A4D0S4 1761 aa13.21□□□□□ -0.3
RCC1-204ENST00000398958 DOT1LQ8TEK3 1739 aa13.21□□□□□ -0.3
RCC1-204ENST00000398958 TPD52L1Q16890 204 aaPredicted RBP13.2□□□□□ -0.3
RCC1-204ENST00000398958 RRP12Q5JTH9 1297 aaKnown RBP13.2□□□□□ -0.3
RCC1-204ENST00000398958 CCDC102BQ68D86 513 aa13.2□□□□□ -0.3
RCC1-204ENST00000398958 ZNF592Q92610 1267 aa13.2□□□□□ -0.3
RCC1-204ENST00000398958 CDCA7Q9BWT1 371 aaPredicted RBP13.2□□□□□ -0.3
RCC1-204ENST00000398958 DDX41Q9UJV9 622 aaKnown RBP13.2□□□□□ -0.3
RCC1-204ENST00000398958 RIPOR2Q9Y4F9 1068 aa13.2□□□□□ -0.3
RCC1-204ENST00000398958 MYH14Q7Z406 1995 aaKnown RBP13.2□□□□□ -0.3
RCC1-204ENST00000398958 FOXP2O15409 715 aa13.2□□□□□ -0.3
RCC1-204ENST00000398958 RFC4P35249 363 aa13.2□□□□□ -0.3
RCC1-204ENST00000398958 ANO6Q4KMQ2 910 aa13.2□□□□□ -0.3
RCC1-204ENST00000398958 ZNF34Q8IZ26 560 aa13.2□□□□□ -0.3
RCC1-204ENST00000398958 CCDC82Q8N4S0 544 aa13.2□□□□□ -0.3
RCC1-204ENST00000398958 CBX8Q9HC52 389 aa13.2□□□□□ -0.3
RCC1-204ENST00000398958 NUP188Q5SRE5 1749 aa13.2□□□□□ -0.3
RCC1-204ENST00000398958 CTDNEP1O95476 244 aa13.19□□□□□ -0.3
RCC1-204ENST00000398958 ANKRD1Q15327 319 aa13.19□□□□□ -0.3
RCC1-204ENST00000398958 ZSCAN25Q6NSZ9 544 aa13.19□□□□□ -0.3
RCC1-204ENST00000398958 VPS37DQ86XT2 251 aa13.19□□□□□ -0.3
RCC1-204ENST00000398958 FBXW7Q969H0 707 aa13.19□□□□□ -0.3
RCC1-204ENST00000398958 PAXBP1Q9Y5B6 917 aa13.19□□□□□ -0.3
RCC1-204ENST00000398958 PLEKHG2Q9H7P9 1386 aa13.19□□□□□ -0.3
RCC1-204ENST00000398958 WNK3Q9BYP7 1800 aa13.19□□□□□ -0.3
RCC1-204ENST00000398958 PRKAB2O43741 272 aa13.19□□□□□ -0.3
RCC1-204ENST00000398958 FGAP02671 866 aa13.19□□□□□ -0.3
RCC1-204ENST00000398958 SETDB2Q96T68 719 aa13.19□□□□□ -0.3
RCC1-204ENST00000398958 TNMDQ9H2S6 317 aa13.19□□□□□ -0.3
RCC1-204ENST00000398958 MTMR7Q9Y216 660 aa13.19□□□□□ -0.3
RCC1-204ENST00000398958 SLFN14P0C7P3 912 aa13.19□□□□□ -0.3
RCC1-204ENST00000398958 ZNF75DP51815 510 aa13.19□□□□□ -0.3
RCC1-204ENST00000398958 KRT85P78386 507 aa13.19□□□□□ -0.3
RCC1-204ENST00000398958 EVX2Q03828 476 aa13.19□□□□□ -0.3
RCC1-204ENST00000398958 CHRNDQ07001 517 aa13.19□□□□□ -0.3
RCC1-204ENST00000398958 DHX32Q7L7V1 743 aaKnown RBP13.19□□□□□ -0.3
RCC1-204ENST00000398958 ERCC4Q92889 916 aaPredicted RBP13.19□□□□□ -0.3
RCC1-204ENST00000398958 SPATA32Q96LK8 384 aa13.19□□□□□ -0.3
RCC1-204ENST00000398958 AK7Q96M32 723 aa13.19□□□□□ -0.3
RCC1-204ENST00000398958 ZKSCAN3Q9BRR0 538 aa13.19□□□□□ -0.3
RCC1-204ENST00000398958 RTCBQ9Y3I0 505 aaKnown RBP13.19□□□□□ -0.3
RCC1-204ENST00000398958 UBR2Q8IWV8 1755 aa13.18□□□□□ -0.3
RCC1-204ENST00000398958 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.18□□□□□ -0.3
RCC1-204ENST00000398958 PDE8BO95263 885 aa13.18□□□□□ -0.3
RCC1-204ENST00000398958 KRT32Q14532 448 aa13.18□□□□□ -0.3
RCC1-204ENST00000398958 MAGEB6Q8N7X4 407 aa13.18□□□□□ -0.3
RCC1-204ENST00000398958 HELLSQ9NRZ9 838 aa13.18□□□□□ -0.3
RCC1-204ENST00000398958 PTPDC1A2A3K4 754 aa13.18□□□□□ -0.3
RCC1-204ENST00000398958 GOLGA6L4A6NEF3 574 aa13.18□□□□□ -0.3
RCC1-204ENST00000398958 ZBTB22O15209 634 aa13.18□□□□□ -0.3
RCC1-204ENST00000398958 CSF1RP07333 972 aa13.18□□□□□ -0.3
RCC1-204ENST00000398958 IGHMBP2P38935 993 aaKnown RBP13.18□□□□□ -0.3
RCC1-204ENST00000398958 KIF18AQ8NI77 898 aa13.18□□□□□ -0.3
RCC1-204ENST00000398958 DACT1Q9NYF0 836 aa13.18□□□□□ -0.3
RCC1-204ENST00000398958 MORC2Q9Y6X9 1032 aaPredicted RBP13.18□□□□□ -0.3
RCC1-204ENST00000398958 GPAA1O43292 621 aa13.17□□□□□ -0.3
RCC1-204ENST00000398958 CIAO1O76071 339 aa13.17□□□□□ -0.3
RCC1-204ENST00000398958 NTSR2O95665 410 aa13.17□□□□□ -0.3
RCC1-204ENST00000398958 RASGRF1Q13972 1273 aa13.17□□□□□ -0.3
RCC1-204ENST00000398958 TSGA10IPQ3SY00 556 aa13.17□□□□□ -0.3
RCC1-204ENST00000398958 TXNRD3Q86VQ6 643 aa13.17□□□□□ -0.3
RCC1-204ENST00000398958 ARMT1Q9H993 441 aa13.17□□□□□ -0.3
RCC1-204ENST00000398958 PLA2G4DQ86XP0 818 aa13.17□□□□□ -0.3
RCC1-204ENST00000398958 BICD2Q8TD16 824 aa13.17□□□□□ -0.3
RCC1-204ENST00000398958 CACTINQ8WUQ7 758 aaKnown RBP13.17□□□□□ -0.3
RCC1-204ENST00000398958 MYL10Q9BUA6 226 aa13.17□□□□□ -0.3
RCC1-204ENST00000398958 CLIP2Q9UDT6 1046 aa13.17□□□□□ -0.3
RCC1-204ENST00000398958 CEP135Q66GS9 1140 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms