RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 ANGEL1Q9UNK9 670 aaKnown RBP16.2■□□□□ 0.18
PRAME-202ENST00000398743 DDX60Q8IY21 1712 aaKnown RBP16.2■□□□□ 0.18
PRAME-202ENST00000398743 ANO6Q4KMQ2 910 aa16.19■□□□□ 0.18
PRAME-202ENST00000398743 ORC3Q9UBD5 711 aaPredicted RBP16.19■□□□□ 0.18
PRAME-202ENST00000398743 ZMYM6O95789 1325 aa16.19■□□□□ 0.18
PRAME-202ENST00000398743 MYH15Q9Y2K3 1946 aa16.19■□□□□ 0.18
PRAME-202ENST00000398743 KIAA2012Q0VF49 1180 aa16.19■□□□□ 0.18
PRAME-202ENST00000398743 BARGINQ6ZT62 677 aa16.19■□□□□ 0.18
PRAME-202ENST00000398743 CCAR1Q8IX12 1150 aaKnown RBP16.19■□□□□ 0.18
PRAME-202ENST00000398743 MAGEB6Q8N7X4 407 aa16.19■□□□□ 0.18
PRAME-202ENST00000398743 SMARCC1Q92922 1105 aaPredicted RBP16.19■□□□□ 0.18
PRAME-202ENST00000398743 ZNF652Q9Y2D9 606 aa16.19■□□□□ 0.18
PRAME-202ENST00000398743 PHLPP1O60346 1717 aa16.18■□□□□ 0.18
PRAME-202ENST00000398743 SNAP23O00161 211 aa16.18■□□□□ 0.18
PRAME-202ENST00000398743 ALX1Q15699 326 aa16.18■□□□□ 0.18
PRAME-202ENST00000398743 FBXO18Q8NFZ0 1043 aa16.18■□□□□ 0.18
PRAME-202ENST00000398743 PATL2C9JE40 543 aaKnown RBP16.17■□□□□ 0.18
PRAME-202ENST00000398743 SH2B2O14492 632 aaPredicted RBP16.17■□□□□ 0.18
PRAME-202ENST00000398743 AP5Z1O43299 807 aa16.17■□□□□ 0.18
PRAME-202ENST00000398743 CCDC73Q6ZRK6 1079 aa16.17■□□□□ 0.18
PRAME-202ENST00000398743 CYB5R4Q7L1T6 521 aa16.17■□□□□ 0.18
PRAME-202ENST00000398743 RAB11FIP4Q86YS3 637 aa16.17■□□□□ 0.18
PRAME-202ENST00000398743 DENND2AQ9ULE3 1009 aa16.17■□□□□ 0.18
PRAME-202ENST00000398743 NUTM2BA6NNL0 878 aaPredicted RBP16.17■□□□□ 0.18
PRAME-202ENST00000398743 NUTM2EB1AL46 878 aaPredicted RBP16.17■□□□□ 0.18
PRAME-202ENST00000398743 CTAGE5O15320 804 aa16.17■□□□□ 0.18
PRAME-202ENST00000398743 ME1P48163 572 aa16.17■□□□□ 0.18
PRAME-202ENST00000398743 LUZP1Q86V48 1076 aa16.17■□□□□ 0.18
PRAME-202ENST00000398743 NUTM2AQ8IVF1 878 aaPredicted RBP16.17■□□□□ 0.18
PRAME-202ENST00000398743 TMEM87BQ96K49 555 aa16.17■□□□□ 0.18
PRAME-202ENST00000398743 NAPBQ9H115 298 aa16.17■□□□□ 0.18
PRAME-202ENST00000398743 CBX8Q9HC52 389 aa16.17■□□□□ 0.18
PRAME-202ENST00000398743 RTEL1Q9NZ71 1219 aa16.17■□□□□ 0.18
PRAME-202ENST00000398743 B4E1Z4 1266 aa16.16■□□□□ 0.18
PRAME-202ENST00000398743 MBD4O95243 580 aa16.16■□□□□ 0.18
PRAME-202ENST00000398743 CAVIN2O95810 425 aa16.16■□□□□ 0.18
PRAME-202ENST00000398743 METAP2P50579 478 aaKnown RBP eCLIP16.16■□□□□ 0.18
PRAME-202ENST00000398743 OTUD7BQ6GQQ9 843 aa16.16■□□□□ 0.18
PRAME-202ENST00000398743 IFNL3Q8IZI9 196 aa16.16■□□□□ 0.18
PRAME-202ENST00000398743 RGS22Q8NE09 1264 aa16.16■□□□□ 0.18
PRAME-202ENST00000398743 CDKL5O76039 1030 aa16.16■□□□□ 0.18
PRAME-202ENST00000398743 BRAPQ7Z569 592 aa16.16■□□□□ 0.18
PRAME-202ENST00000398743 MPNDQ8N594 471 aa16.16■□□□□ 0.18
PRAME-202ENST00000398743 GOLPH3LQ9H4A5 285 aa16.16■□□□□ 0.18
PRAME-202ENST00000398743 EPB41L4AQ9HCS5 686 aaPredicted RBP16.16■□□□□ 0.18
PRAME-202ENST00000398743 NEDD4P46934 1319 aa16.16■□□□□ 0.18
PRAME-202ENST00000398743 LAMB2P55268 1798 aa16.15■□□□□ 0.18
PRAME-202ENST00000398743 KINO60870 393 aaKnown RBP16.15■□□□□ 0.18
PRAME-202ENST00000398743 BCAMP50895 628 aa16.15■□□□□ 0.18
PRAME-202ENST00000398743 FAM160A1Q05DH4 1040 aa16.15■□□□□ 0.18
PRAME-202ENST00000398743 CHRNDQ07001 517 aa16.15■□□□□ 0.18
PRAME-202ENST00000398743 SNW1Q13573 536 aaKnown RBP16.15■□□□□ 0.18
PRAME-202ENST00000398743 CDC5LQ99459 802 aaKnown RBP16.15■□□□□ 0.18
PRAME-202ENST00000398743 LTBP4Q8N2S1 1624 aa16.15■□□□□ 0.18
PRAME-202ENST00000398743 DOCK2Q92608 1830 aa16.15■□□□□ 0.18
PRAME-202ENST00000398743 MYO5AQ9Y4I1 1855 aaKnown RBP16.15■□□□□ 0.18
PRAME-202ENST00000398743 TPM2P07951 284 aa16.14■□□□□ 0.17
PRAME-202ENST00000398743 ZNF165P49910 485 aa16.14■□□□□ 0.17
PRAME-202ENST00000398743 CPLX2Q6PUV4 134 aaKnown RBP16.14■□□□□ 0.17
PRAME-202ENST00000398743 APOA5Q6Q788 366 aa16.14■□□□□ 0.17
PRAME-202ENST00000398743 CLEC4GQ6UXB4 293 aa16.14■□□□□ 0.17
PRAME-202ENST00000398743 NKX2-3Q8TAU0 364 aa16.14■□□□□ 0.17
PRAME-202ENST00000398743 ZNF830Q96NB3 372 aaPredicted RBP16.14■□□□□ 0.17
PRAME-202ENST00000398743 ARMT1Q9H993 441 aa16.14■□□□□ 0.17
PRAME-202ENST00000398743 GOLGA6L6A8MZA4 724 aa16.14■□□□□ 0.17
PRAME-202ENST00000398743 KCNQ2O43526 872 aa16.14■□□□□ 0.17
PRAME-202ENST00000398743 TPM3P06753 285 aa16.14■□□□□ 0.17
PRAME-202ENST00000398743 GNAT2P19087 354 aa16.14■□□□□ 0.17
PRAME-202ENST00000398743 FSIP1Q8NA03 581 aa16.14■□□□□ 0.17
PRAME-202ENST00000398743 LINC00301Q8NCQ3 95 aa16.14■□□□□ 0.17
PRAME-202ENST00000398743 ENGASEQ8NFI3 743 aa16.14■□□□□ 0.17
PRAME-202ENST00000398743 KCNG4Q8TDN1 519 aa16.14■□□□□ 0.17
PRAME-202ENST00000398743 DNAJC25Q9H1X3 360 aa16.14■□□□□ 0.17
PRAME-202ENST00000398743 TTC12Q9H892 705 aaPredicted RBP16.14■□□□□ 0.17
PRAME-202ENST00000398743 POLR3EQ9NVU0 708 aa16.14■□□□□ 0.17
PRAME-202ENST00000398743 PCDHA7Q9UN72 937 aa16.14■□□□□ 0.17
PRAME-202ENST00000398743 C4AP0C0L4 1744 aa16.14■□□□□ 0.17
PRAME-202ENST00000398743 C4BP0C0L5 1744 aa16.14■□□□□ 0.17
PRAME-202ENST00000398743 PNPLA7Q6ZV29 1317 aa16.13■□□□□ 0.17
PRAME-202ENST00000398743 YEATS4O95619 227 aa16.13■□□□□ 0.17
PRAME-202ENST00000398743 POLR3DP05423 398 aaPredicted RBP16.13■□□□□ 0.17
PRAME-202ENST00000398743 TERF1P54274 439 aa16.13■□□□□ 0.17
PRAME-202ENST00000398743 STK38Q15208 465 aa16.13■□□□□ 0.17
PRAME-202ENST00000398743 MYSM1Q5VVJ2 828 aa16.13■□□□□ 0.17
PRAME-202ENST00000398743 ADALQ6DHV7 355 aa16.13■□□□□ 0.17
PRAME-202ENST00000398743 NFXL1Q6ZNB6 911 aa16.13■□□□□ 0.17
PRAME-202ENST00000398743 TDRD7Q8NHU6 1098 aaKnown RBP16.13■□□□□ 0.17
PRAME-202ENST00000398743 IGDCC4Q8TDY8 1250 aa16.13■□□□□ 0.17
PRAME-202ENST00000398743 PIBF1Q8WXW3 757 aa16.13■□□□□ 0.17
PRAME-202ENST00000398743 MRPS27Q92552 414 aaKnown RBP16.13■□□□□ 0.17
PRAME-202ENST00000398743 NACAP1Q9BZK3 213 aa16.13■□□□□ 0.17
PRAME-202ENST00000398743 CNNM2Q9H8M5 875 aa16.13■□□□□ 0.17
PRAME-202ENST00000398743 MYH14Q7Z406 1995 aaKnown RBP16.13■□□□□ 0.17
PRAME-202ENST00000398743 GSG1L2A8MUP6 293 aa16.13■□□□□ 0.17
PRAME-202ENST00000398743 ZBTB43O43298 467 aa16.13■□□□□ 0.17
PRAME-202ENST00000398743 KIF23Q02241 960 aaPredicted RBP16.13■□□□□ 0.17
PRAME-202ENST00000398743 SF3A1Q15459 793 aaKnown RBP16.13■□□□□ 0.17
PRAME-202ENST00000398743 TMEM67Q5HYA8 995 aa16.13■□□□□ 0.17
PRAME-202ENST00000398743 SGMS1Q86VZ5 419 aa16.13■□□□□ 0.17
PRAME-202ENST00000398743 MICU3Q86XE3 530 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms