RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 MCM5P33992 734 aa16.23■□□□□ 0.19
PCDHA11-201ENST00000398640 TTC6Q86TZ1 520 aa16.23■□□□□ 0.19
PCDHA11-201ENST00000398640 RGS22Q8NE09 1264 aa16.23■□□□□ 0.19
PCDHA11-201ENST00000398640 ESR2Q92731 530 aa16.23■□□□□ 0.19
PCDHA11-201ENST00000398640 SPATA31E1Q6ZUB1 1445 aa16.23■□□□□ 0.19
PCDHA11-201ENST00000398640 IQGAP3Q86VI3 1631 aa16.23■□□□□ 0.19
PCDHA11-201ENST00000398640 DIP2CQ9Y2E4 1556 aa16.23■□□□□ 0.19
PCDHA11-201ENST00000398640 STX1AQ16623 288 aa16.23■□□□□ 0.19
PCDHA11-201ENST00000398640 MAP9Q49MG5 647 aa16.23■□□□□ 0.19
PCDHA11-201ENST00000398640 C16orf45Q96MC5 204 aaPredicted RBP16.23■□□□□ 0.19
PCDHA11-201ENST00000398640 ASAP1Q9ULH1 1129 aa16.23■□□□□ 0.19
PCDHA11-201ENST00000398640 TEX11Q8IYF3 940 aa16.23■□□□□ 0.19
PCDHA11-201ENST00000398640 TRIM47Q96LD4 638 aa16.23■□□□□ 0.19
PCDHA11-201ENST00000398640 EIF4A1P60842 406 aaKnown RBP16.23■□□□□ 0.19
PCDHA11-201ENST00000398640 NCBP1Q09161 790 aaKnown RBP16.23■□□□□ 0.19
PCDHA11-201ENST00000398640 BRF1Q92994 677 aa16.23■□□□□ 0.19
PCDHA11-201ENST00000398640 GCOM1H8Y6P7 765 aaPredicted RBP16.23■□□□□ 0.19
PCDHA11-201ENST00000398640 MYZAPP0CAP1 466 aa16.23■□□□□ 0.19
PCDHA11-201ENST00000398640 WDR66Q8TBY9 1149 aa16.23■□□□□ 0.19
PCDHA11-201ENST00000398640 DLGAP5Q15398 846 aa16.22■□□□□ 0.19
PCDHA11-201ENST00000398640 SHTN1A0MZ66 631 aa16.22■□□□□ 0.19
PCDHA11-201ENST00000398640 NOD1Q9Y239 953 aa16.22■□□□□ 0.19
PCDHA11-201ENST00000398640 TTC22Q5TAA0 569 aa16.22■□□□□ 0.19
PCDHA11-201ENST00000398640 CNNM2Q9H8M5 875 aa16.22■□□□□ 0.19
PCDHA11-201ENST00000398640 FAM114A1Q8IWE2 563 aa16.22■□□□□ 0.19
PCDHA11-201ENST00000398640 ERBB3P21860 1342 aa16.22■□□□□ 0.19
PCDHA11-201ENST00000398640 CEP152O94986 1710 aa16.22■□□□□ 0.19
PCDHA11-201ENST00000398640 ZNF526Q8TF50 670 aaPredicted RBP16.21■□□□□ 0.19
PCDHA11-201ENST00000398640 DCPSQ96C86 337 aaKnown RBP16.21■□□□□ 0.19
PCDHA11-201ENST00000398640 DDX19AQ9NUU7 478 aaKnown RBP16.21■□□□□ 0.19
PCDHA11-201ENST00000398640 STAMBPO95630 424 aa16.21■□□□□ 0.19
PCDHA11-201ENST00000398640 LRSAM1Q6UWE0 723 aa16.21■□□□□ 0.19
PCDHA11-201ENST00000398640 INCENPQ9NQS7 918 aa16.21■□□□□ 0.19
PCDHA11-201ENST00000398640 SPDYE3A6NKU9 549 aa16.21■□□□□ 0.19
PCDHA11-201ENST00000398640 POLR3GO15318 223 aaPredicted RBP16.21■□□□□ 0.19
PCDHA11-201ENST00000398640 RRAGBQ5VZM2 374 aa16.21■□□□□ 0.19
PCDHA11-201ENST00000398640 JADE2Q9NQC1 790 aa16.21■□□□□ 0.19
PCDHA11-201ENST00000398640 ZBTB43O43298 467 aa16.21■□□□□ 0.19
PCDHA11-201ENST00000398640 ZYXQ15942 572 aaKnown RBP16.21■□□□□ 0.19
PCDHA11-201ENST00000398640 RTN1Q16799 776 aa16.21■□□□□ 0.19
PCDHA11-201ENST00000398640 CCDC102BQ68D86 513 aa16.21■□□□□ 0.19
PCDHA11-201ENST00000398640 ZSCAN30Q86W11 494 aa16.21■□□□□ 0.19
PCDHA11-201ENST00000398640 CDC42BPBQ9Y5S2 1711 aa16.21■□□□□ 0.18
PCDHA11-201ENST00000398640 EYA2O00167 538 aa16.21■□□□□ 0.18
PCDHA11-201ENST00000398640 SERPINB2P05120 415 aa16.21■□□□□ 0.18
PCDHA11-201ENST00000398640 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.2■□□□□ 0.18
PCDHA11-201ENST00000398640 STAT6P42226 847 aa16.2■□□□□ 0.18
PCDHA11-201ENST00000398640 KIF2AO00139 706 aaPredicted RBP16.2■□□□□ 0.18
PCDHA11-201ENST00000398640 DALRD3Q5D0E6 543 aaKnown RBP16.2■□□□□ 0.18
PCDHA11-201ENST00000398640 ALG1Q9BT22 464 aa16.2■□□□□ 0.18
PCDHA11-201ENST00000398640 RPS8P62241 208 aaKnown RBP16.2■□□□□ 0.18
PCDHA11-201ENST00000398640 ZSWIM4Q9H7M6 989 aa16.2■□□□□ 0.18
PCDHA11-201ENST00000398640 MROH5Q6ZUA9 1318 aa16.2■□□□□ 0.18
PCDHA11-201ENST00000398640 ZBTB9Q96C00 473 aa16.2■□□□□ 0.18
PCDHA11-201ENST00000398640 TAOK3Q9H2K8 898 aa16.2■□□□□ 0.18
PCDHA11-201ENST00000398640 SSX2IPQ9Y2D8 614 aa16.2■□□□□ 0.18
PCDHA11-201ENST00000398640 ATP2B4P23634 1241 aa16.2■□□□□ 0.18
PCDHA11-201ENST00000398640 PLA2R1Q13018 1463 aa16.19■□□□□ 0.18
PCDHA11-201ENST00000398640 PPEF1O14829 653 aaPredicted RBP16.19■□□□□ 0.18
PCDHA11-201ENST00000398640 TERF1P54274 439 aa16.19■□□□□ 0.18
PCDHA11-201ENST00000398640 CHL1O00533 1208 aa16.19■□□□□ 0.18
PCDHA11-201ENST00000398640 BACH1O14867 736 aa16.19■□□□□ 0.18
PCDHA11-201ENST00000398640 RNF187Q5TA31 235 aaPredicted RBP16.19■□□□□ 0.18
PCDHA11-201ENST00000398640 AATKQ6ZMQ8 1374 aa16.19■□□□□ 0.18
PCDHA11-201ENST00000398640 HMG20BQ9P0W2 317 aa16.19■□□□□ 0.18
PCDHA11-201ENST00000398640 ANKRD44Q8N8A2 993 aa16.19■□□□□ 0.18
PCDHA11-201ENST00000398640 C6orf50Q9HD87 102 aa16.19■□□□□ 0.18
PCDHA11-201ENST00000398640 MRVI1Q9Y6F6 885 aa16.19■□□□□ 0.18
PCDHA11-201ENST00000398640 ALKQ9UM73 1620 aa16.19■□□□□ 0.18
PCDHA11-201ENST00000398640 TAF5LO75529 589 aa16.18■□□□□ 0.18
PCDHA11-201ENST00000398640 ADCY5O95622 1261 aa16.18■□□□□ 0.18
PCDHA11-201ENST00000398640 PALLDQ8WX93 1383 aa16.18■□□□□ 0.18
PCDHA11-201ENST00000398640 N4BP3O15049 544 aa16.18■□□□□ 0.18
PCDHA11-201ENST00000398640 KCNQ4P56696 695 aa16.18■□□□□ 0.18
PCDHA11-201ENST00000398640 MAATS1Q7Z4T9 603 aa16.18■□□□□ 0.18
PCDHA11-201ENST00000398640 RRP36Q96EU6 259 aaKnown RBP16.18■□□□□ 0.18
PCDHA11-201ENST00000398640 NBPF7P0C2Y1 421 aaPredicted RBP16.18■□□□□ 0.18
PCDHA11-201ENST00000398640 MCMDC2Q4G0Z9 681 aa16.18■□□□□ 0.18
PCDHA11-201ENST00000398640 CHST3Q7LGC8 479 aa16.18■□□□□ 0.18
PCDHA11-201ENST00000398640 TBC1D22AQ8WUA7 517 aa16.18■□□□□ 0.18
PCDHA11-201ENST00000398640 RNF113AO15541 343 aaKnown RBP16.18■□□□□ 0.18
PCDHA11-201ENST00000398640 RFX1P22670 979 aa16.18■□□□□ 0.18
PCDHA11-201ENST00000398640 GJC1P36383 396 aa16.18■□□□□ 0.18
PCDHA11-201ENST00000398640 SYKP43405 635 aa16.18■□□□□ 0.18
PCDHA11-201ENST00000398640 GIMAP6Q6P9H5 292 aa16.18■□□□□ 0.18
PCDHA11-201ENST00000398640 ZNF830Q96NB3 372 aaPredicted RBP16.18■□□□□ 0.18
PCDHA11-201ENST00000398640 MCM3P25205 808 aa16.18■□□□□ 0.18
PCDHA11-201ENST00000398640 CTSWP56202 376 aa16.18■□□□□ 0.18
PCDHA11-201ENST00000398640 SMC1AQ14683 1233 aaKnown RBP16.18■□□□□ 0.18
PCDHA11-201ENST00000398640 CERS3Q8IU89 383 aa16.18■□□□□ 0.18
PCDHA11-201ENST00000398640 OTUD6BQ8N6M0 293 aa16.18■□□□□ 0.18
PCDHA11-201ENST00000398640 TBC1D5Q92609 795 aa16.18■□□□□ 0.18
PCDHA11-201ENST00000398640 CNPY2Q9Y2B0 182 aa16.18■□□□□ 0.18
PCDHA11-201ENST00000398640 KIF24Q5T7B8 1368 aa16.18■□□□□ 0.18
PCDHA11-201ENST00000398640 MAP3K15Q6ZN16 1313 aa16.17■□□□□ 0.18
PCDHA11-201ENST00000398640 EN1Q05925 392 aaPredicted RBP16.17■□□□□ 0.18
PCDHA11-201ENST00000398640 TNFAIP1Q13829 316 aa16.17■□□□□ 0.18
PCDHA11-201ENST00000398640 KANK3Q6NY19 840 aa16.17■□□□□ 0.18
PCDHA11-201ENST00000398640 G2E3Q7L622 706 aa16.17■□□□□ 0.18
PCDHA11-201ENST00000398640 FERMT1Q9BQL6 677 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms