RNA–Protein interactions for RNA: ENST00000398527.6

MSL3-207, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-207ENST00000398527 KIAA1522Q9P206 1035 aaPredicted RBP12.55□□□□□ -0.4
MSL3-207ENST00000398527 KIAA1551Q9HCM1 1747 aa12.55□□□□□ -0.4
MSL3-207ENST00000398527 C4orf46Q504U0 113 aa12.54□□□□□ -0.4
MSL3-207ENST00000398527 ETAA1Q9NY74 926 aa12.54□□□□□ -0.4
MSL3-207ENST00000398527 DIS3Q9Y2L1 958 aaKnown RBP12.54□□□□□ -0.4
MSL3-207ENST00000398527 TAF1LQ8IZX4 1826 aa12.54□□□□□ -0.4
MSL3-207ENST00000398527 PKD1L3Q7Z443 1732 aa12.54□□□□□ -0.4
MSL3-207ENST00000398527 TOGARAM1Q9Y4F4 1720 aa12.54□□□□□ -0.4
MSL3-207ENST00000398527 KINO60870 393 aaKnown RBP12.54□□□□□ -0.4
MSL3-207ENST00000398527 GSCP56915 257 aaPredicted RBP12.54□□□□□ -0.4
MSL3-207ENST00000398527 ATP2B3Q16720 1220 aa12.54□□□□□ -0.4
MSL3-207ENST00000398527 TSNAXIP1Q2TAA8 658 aa12.54□□□□□ -0.4
MSL3-207ENST00000398527 G2E3Q7L622 706 aa12.54□□□□□ -0.4
MSL3-207ENST00000398527 ENOX1Q8TC92 643 aaKnown RBP12.54□□□□□ -0.4
MSL3-207ENST00000398527 TNRC6CQ9HCJ0 1690 aaKnown RBP12.53□□□□□ -0.4
MSL3-207ENST00000398527 KCNA2P16389 499 aa12.53□□□□□ -0.4
MSL3-207ENST00000398527 SMC1BQ8NDV3 1235 aa12.53□□□□□ -0.4
MSL3-207ENST00000398527 KIF13BQ9NQT8 1826 aa12.53□□□□□ -0.4
MSL3-207ENST00000398527 POU5F1Q01860 360 aaKnown RBP12.53□□□□□ -0.4
MSL3-207ENST00000398527 CDC37L1Q7L3B6 337 aa12.53□□□□□ -0.4
MSL3-207ENST00000398527 USHBP1Q8N6Y0 703 aa12.53□□□□□ -0.4
MSL3-207ENST00000398527 SMCR8Q8TEV9 937 aaPredicted RBP12.53□□□□□ -0.4
MSL3-207ENST00000398527 LRRCC1Q9C099 1032 aa12.53□□□□□ -0.4
MSL3-207ENST00000398527 TOMM22Q9NS69 142 aa12.53□□□□□ -0.4
MSL3-207ENST00000398527 R3HCC1Q9Y3T6 440 aaKnown RBP12.53□□□□□ -0.4
MSL3-207ENST00000398527 KCPQ6ZWJ8 1503 aa12.52□□□□□ -0.4
MSL3-207ENST00000398527 TGFB3P10600 412 aa12.52□□□□□ -0.41
MSL3-207ENST00000398527 KLHL40Q2TBA0 621 aa12.52□□□□□ -0.41
MSL3-207ENST00000398527 ARHGAP27Q6ZUM4 889 aa12.52□□□□□ -0.41
MSL3-207ENST00000398527 ELOA2Q8IYF1 753 aaPredicted RBP12.52□□□□□ -0.41
MSL3-207ENST00000398527 ADAMTS7Q9UKP4 1686 aa12.52□□□□□ -0.41
MSL3-207ENST00000398527 KIF5CO60282 957 aa12.51□□□□□ -0.41
MSL3-207ENST00000398527 NBPF7P0C2Y1 421 aaPredicted RBP12.51□□□□□ -0.41
MSL3-207ENST00000398527 ZNF394Q53GI3 561 aa12.51□□□□□ -0.41
MSL3-207ENST00000398527 PLEKHO1Q53GL0 409 aaPredicted RBP12.51□□□□□ -0.41
MSL3-207ENST00000398527 OTUD7AQ8TE49 926 aaPredicted RBP12.51□□□□□ -0.41
MSL3-207ENST00000398527 SSH3Q8TE77 659 aa12.51□□□□□ -0.41
MSL3-207ENST00000398527 RASSF4Q9H2L5 321 aa12.51□□□□□ -0.41
MSL3-207ENST00000398527 TMX1Q9H3N1 280 aa12.51□□□□□ -0.41
MSL3-207ENST00000398527 KLF15Q9UIH9 416 aa12.51□□□□□ -0.41
MSL3-207ENST00000398527 C4BP0C0L5 1744 aa12.51□□□□□ -0.41
MSL3-207ENST00000398527 AKAP4Q5JQC9 854 aa12.51□□□□□ -0.41
MSL3-207ENST00000398527 C9orf131Q5VYM1 1079 aa12.51□□□□□ -0.41
MSL3-207ENST00000398527 ZC3H15Q8WU90 426 aaKnown RBP12.51□□□□□ -0.41
MSL3-207ENST00000398527 GRPEL1Q9HAV7 217 aa12.51□□□□□ -0.41
MSL3-207ENST00000398527 BCS1LQ9Y276 419 aa12.51□□□□□ -0.41
MSL3-207ENST00000398527 FAN1Q9Y2M0 1017 aa12.51□□□□□ -0.41
MSL3-207ENST00000398527 UBR3Q6ZT12 1888 aa12.5□□□□□ -0.41
MSL3-207ENST00000398527 EIF3JO75822 258 aaKnown RBP12.5□□□□□ -0.41
MSL3-207ENST00000398527 C17orf50Q8WW18 174 aa12.5□□□□□ -0.41
MSL3-207ENST00000398527 RBM42Q9BTD8 480 aaKnown RBP12.5□□□□□ -0.41
MSL3-207ENST00000398527 ARIH1Q9Y4X5 557 aaPredicted RBP12.5□□□□□ -0.41
MSL3-207ENST00000398527 BAG4O95429 457 aaKnown RBP12.5□□□□□ -0.41
MSL3-207ENST00000398527 MX1P20591 662 aa12.5□□□□□ -0.41
MSL3-207ENST00000398527 POLA2Q14181 598 aa12.5□□□□□ -0.41
MSL3-207ENST00000398527 MMTAG2Q9BU76 263 aaKnown RBP12.5□□□□□ -0.41
MSL3-207ENST00000398527 POLR3CQ9BUI4 534 aaPredicted RBP12.5□□□□□ -0.41
MSL3-207ENST00000398527 PANK2Q9BZ23 570 aa12.5□□□□□ -0.41
MSL3-207ENST00000398527 F6X3S4 739 aa12.49□□□□□ -0.41
MSL3-207ENST00000398527 FKBP5Q13451 457 aaPredicted RBP12.49□□□□□ -0.41
MSL3-207ENST00000398527 SREK1Q8WXA9 508 aaKnown RBP12.49□□□□□ -0.41
MSL3-207ENST00000398527 DUSP9Q99956 384 aaKnown RBP12.49□□□□□ -0.41
MSL3-207ENST00000398527 RRAGCQ9HB90 399 aa12.49□□□□□ -0.41
MSL3-207ENST00000398527 TBC1D2BQ9UPU7 963 aa12.49□□□□□ -0.41
MSL3-207ENST00000398527 VDRP11473 427 aa12.49□□□□□ -0.41
MSL3-207ENST00000398527 TGFB2P61812 414 aa12.49□□□□□ -0.41
MSL3-207ENST00000398527 SLC4A10Q6U841 1118 aa12.49□□□□□ -0.41
MSL3-207ENST00000398527 TAX1BP1Q86VP1 789 aa12.49□□□□□ -0.41
MSL3-207ENST00000398527 AMIGO3Q86WK7 504 aa12.49□□□□□ -0.41
MSL3-207ENST00000398527 CCDC47Q96A33 483 aaKnown RBP12.49□□□□□ -0.41
MSL3-207ENST00000398527 INTS4Q96HW7 963 aaKnown RBP12.49□□□□□ -0.41
MSL3-207ENST00000398527 AK7Q96M32 723 aa12.49□□□□□ -0.41
MSL3-207ENST00000398527 ESYT1Q9BSJ8 1104 aa12.49□□□□□ -0.41
MSL3-207ENST00000398527 INO80BQ9C086 356 aaPredicted RBP12.49□□□□□ -0.41
MSL3-207ENST00000398527 SWAP70Q9UH65 585 aa12.49□□□□□ -0.41
MSL3-207ENST00000398527 USP42Q9H9J4 1324 aaKnown RBP12.49□□□□□ -0.41
MSL3-207ENST00000398527 CCDC175P0C221 793 aa12.48□□□□□ -0.41
MSL3-207ENST00000398527 ATP6V1AP38606 617 aa12.48□□□□□ -0.41
MSL3-207ENST00000398527 MECOMQ03112 1051 aa12.48□□□□□ -0.41
MSL3-207ENST00000398527 CUL4AQ13619 759 aa12.48□□□□□ -0.41
MSL3-207ENST00000398527 TBC1D10BQ4KMP7 808 aaPredicted RBP12.48□□□□□ -0.41
MSL3-207ENST00000398527 GJC2Q5T442 439 aaPredicted RBP12.48□□□□□ -0.41
MSL3-207ENST00000398527 KLHL10Q6JEL2 608 aa12.48□□□□□ -0.41
MSL3-207ENST00000398527 ZNF530Q6P9A1 599 aaPredicted RBP12.48□□□□□ -0.41
MSL3-207ENST00000398527 SAMD3Q8N6K7 520 aa12.48□□□□□ -0.41
MSL3-207ENST00000398527 TDRD7Q8NHU6 1098 aaKnown RBP12.48□□□□□ -0.41
MSL3-207ENST00000398527 TATDN2Q93075 761 aa12.48□□□□□ -0.41
MSL3-207ENST00000398527 SENP7Q9BQF6 1050 aa12.48□□□□□ -0.41
MSL3-207ENST00000398527 USP44Q9H0E7 712 aa12.48□□□□□ -0.41
MSL3-207ENST00000398527 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.48□□□□□ -0.41
MSL3-207ENST00000398527 SIPA1L3O60292 1781 aaPredicted RBP12.48□□□□□ -0.41
MSL3-207ENST00000398527 ZNF445P59923 1031 aa12.48□□□□□ -0.41
MSL3-207ENST00000398527 ANKRD13BQ86YJ7 626 aa12.48□□□□□ -0.41
MSL3-207ENST00000398527 TSPYL2Q9H2G4 693 aaPredicted RBP12.48□□□□□ -0.41
MSL3-207ENST00000398527 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.48□□□□□ -0.41
MSL3-207ENST00000398527 XBP1P17861 261 aa12.47□□□□□ -0.41
MSL3-207ENST00000398527 IRX1P78414 480 aaPredicted RBP12.47□□□□□ -0.41
MSL3-207ENST00000398527 ZSCAN30Q86W11 494 aa12.47□□□□□ -0.41
MSL3-207ENST00000398527 AK9Q5TCS8 1911 aa12.47□□□□□ -0.41
MSL3-207ENST00000398527 PALLDQ8WX93 1383 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms