RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 ARIH1Q9Y4X5 557 aaPredicted RBP12.53□□□□□ -0.4
NIFKP1-201ENST00000398317 IL16Q14005 1332 aa12.53□□□□□ -0.4
NIFKP1-201ENST00000398317 FANCIQ9NVI1 1328 aa12.53□□□□□ -0.4
NIFKP1-201ENST00000398317 MED23Q9ULK4 1368 aa12.53□□□□□ -0.4
NIFKP1-201ENST00000398317 ZNF609O15014 1411 aa12.53□□□□□ -0.4
NIFKP1-201ENST00000398317 VAMP4O75379 141 aa12.52□□□□□ -0.41
NIFKP1-201ENST00000398317 ITGA6P23229 1130 aa12.52□□□□□ -0.41
NIFKP1-201ENST00000398317 CASP7P55210 303 aa12.52□□□□□ -0.41
NIFKP1-201ENST00000398317 KIF23Q02241 960 aaPredicted RBP12.52□□□□□ -0.41
NIFKP1-201ENST00000398317 FAM161AQ3B820 660 aa12.52□□□□□ -0.41
NIFKP1-201ENST00000398317 DNAAF4Q8WXU2 420 aa12.52□□□□□ -0.41
NIFKP1-201ENST00000398317 ZDHHC16Q969W1 377 aa12.52□□□□□ -0.41
NIFKP1-201ENST00000398317 SPDYE16A6NNV3 312 aaPredicted RBP12.51□□□□□ -0.41
NIFKP1-201ENST00000398317 KLRK1P26718 216 aa12.51□□□□□ -0.41
NIFKP1-201ENST00000398317 EXOSC9Q06265 439 aaKnown RBP12.51□□□□□ -0.41
NIFKP1-201ENST00000398317 NBPF9Q3BBW0 867 aa12.51□□□□□ -0.41
NIFKP1-201ENST00000398317 DACT2Q5SW24 774 aa12.51□□□□□ -0.41
NIFKP1-201ENST00000398317 PRAMEF18Q5VWM3 479 aa12.51□□□□□ -0.41
NIFKP1-201ENST00000398317 CCDC102AQ96A19 550 aa12.51□□□□□ -0.41
NIFKP1-201ENST00000398317 PLA2G12BQ9BX93 195 aa12.51□□□□□ -0.41
NIFKP1-201ENST00000398317 MCOLN1Q9GZU1 580 aa12.51□□□□□ -0.41
NIFKP1-201ENST00000398317 F6X3S4 739 aa12.5□□□□□ -0.41
NIFKP1-201ENST00000398317 ANP32CO43423 234 aa12.5□□□□□ -0.41
NIFKP1-201ENST00000398317 CSF1RP07333 972 aa12.5□□□□□ -0.41
NIFKP1-201ENST00000398317 SLC10A3P09131 477 aa12.5□□□□□ -0.41
NIFKP1-201ENST00000398317 LSM11P83369 360 aaKnown RBP eCLIP12.5□□□□□ -0.41
NIFKP1-201ENST00000398317 NBR1Q14596 966 aa12.5□□□□□ -0.41
NIFKP1-201ENST00000398317 MOB2Q70IA6 237 aa12.5□□□□□ -0.41
NIFKP1-201ENST00000398317 MPHOSPH8Q99549 860 aa12.5□□□□□ -0.41
NIFKP1-201ENST00000398317 COA1Q9GZY4 146 aa12.5□□□□□ -0.41
NIFKP1-201ENST00000398317 MYH16Q9H6N6 1097 aa12.5□□□□□ -0.41
NIFKP1-201ENST00000398317 LEMD3Q9Y2U8 911 aa12.5□□□□□ -0.41
NIFKP1-201ENST00000398317 ZNF804BA4D1E1 1349 aa12.5□□□□□ -0.41
NIFKP1-201ENST00000398317 PITPNM2Q9BZ72 1349 aa12.49□□□□□ -0.41
NIFKP1-201ENST00000398317 SNAP23O00161 211 aa12.49□□□□□ -0.41
NIFKP1-201ENST00000398317 ARHGAP33O14559 1287 aa12.49□□□□□ -0.41
NIFKP1-201ENST00000398317 TRPA1O75762 1119 aa12.49□□□□□ -0.41
NIFKP1-201ENST00000398317 CHRNDQ07001 517 aa12.49□□□□□ -0.41
NIFKP1-201ENST00000398317 DGKZQ13574 1117 aa12.49□□□□□ -0.41
NIFKP1-201ENST00000398317 STRIP1Q5VSL9 837 aa12.49□□□□□ -0.41
NIFKP1-201ENST00000398317 TTLL5Q6EMB2 1281 aa12.49□□□□□ -0.41
NIFKP1-201ENST00000398317 RASAL3Q86YV0 1011 aa12.49□□□□□ -0.41
NIFKP1-201ENST00000398317 WDR63Q8IWG1 891 aa12.49□□□□□ -0.41
NIFKP1-201ENST00000398317 LINS1Q8NG48 757 aa12.49□□□□□ -0.41
NIFKP1-201ENST00000398317 ANKRD2Q9GZV1 360 aa12.49□□□□□ -0.41
NIFKP1-201ENST00000398317 RNF186Q9NXI6 227 aa12.49□□□□□ -0.41
NIFKP1-201ENST00000398317 PAPPA2Q9BXP8 1791 aa12.48□□□□□ -0.41
NIFKP1-201ENST00000398317 UBE2Q2LH0YL09 131 aa12.48□□□□□ -0.41
NIFKP1-201ENST00000398317 WNT10BO00744 389 aa12.48□□□□□ -0.41
NIFKP1-201ENST00000398317 SASH1O94885 1247 aa12.48□□□□□ -0.41
NIFKP1-201ENST00000398317 PBX2P40425 430 aa12.48□□□□□ -0.41
NIFKP1-201ENST00000398317 KCNJ4P48050 445 aa12.48□□□□□ -0.41
NIFKP1-201ENST00000398317 OGFOD1Q8N543 542 aa12.48□□□□□ -0.41
NIFKP1-201ENST00000398317 HELBQ8NG08 1087 aaPredicted RBP12.48□□□□□ -0.41
NIFKP1-201ENST00000398317 CSRNP1Q96S65 589 aa12.48□□□□□ -0.41
NIFKP1-201ENST00000398317 CHMP3Q9Y3E7 222 aa12.48□□□□□ -0.41
NIFKP1-201ENST00000398317 A0A1B0GUL6 1792 aa12.48□□□□□ -0.41
NIFKP1-201ENST00000398317 ANKRD18BA2A2Z9 1011 aa12.47□□□□□ -0.41
NIFKP1-201ENST00000398317 TAF5LO75529 589 aa12.47□□□□□ -0.41
NIFKP1-201ENST00000398317 MLLT3P42568 568 aaPredicted RBP12.47□□□□□ -0.41
NIFKP1-201ENST00000398317 GTF2IP78347 998 aa12.47□□□□□ -0.41
NIFKP1-201ENST00000398317 FOXO4P98177 505 aa12.47□□□□□ -0.41
NIFKP1-201ENST00000398317 TYW1BQ6NUM6 668 aa12.47□□□□□ -0.41
NIFKP1-201ENST00000398317 KIAA0825Q8IV33 1275 aa12.47□□□□□ -0.41
NIFKP1-201ENST00000398317 SPNS2Q8IVW8 549 aa12.47□□□□□ -0.41
NIFKP1-201ENST00000398317 MYO3BQ8WXR4 1341 aa12.46□□□□□ -0.41
NIFKP1-201ENST00000398317 FKBP1BP68106 108 aa12.46□□□□□ -0.41
NIFKP1-201ENST00000398317 TTLL12Q14166 644 aaPredicted RBP12.46□□□□□ -0.41
NIFKP1-201ENST00000398317 EPHA10Q5JZY3 1008 aa12.46□□□□□ -0.41
NIFKP1-201ENST00000398317 BEND3Q5T5X7 828 aa12.46□□□□□ -0.41
NIFKP1-201ENST00000398317 CD209Q9NNX6 404 aa12.46□□□□□ -0.41
NIFKP1-201ENST00000398317 SAGE1Q9NXZ1 904 aa12.46□□□□□ -0.41
NIFKP1-201ENST00000398317 IFIT5Q13325 482 aaKnown RBP12.45□□□□□ -0.42
NIFKP1-201ENST00000398317 FAM9BQ8IZU0 186 aa12.45□□□□□ -0.42
NIFKP1-201ENST00000398317 ZNF594Q96JF6 807 aaPredicted RBP12.45□□□□□ -0.42
NIFKP1-201ENST00000398317 HDAC9Q9UKV0 1011 aa12.45□□□□□ -0.42
NIFKP1-201ENST00000398317 IRS2Q9Y4H2 1338 aa12.44□□□□□ -0.42
NIFKP1-201ENST00000398317 TNRC18O15417 2968 aaPredicted RBP12.44□□□□□ -0.42
NIFKP1-201ENST00000398317 PLIN1O60240 522 aa12.44□□□□□ -0.42
NIFKP1-201ENST00000398317 PTPREP23469 700 aa12.44□□□□□ -0.42
NIFKP1-201ENST00000398317 PRKG1Q13976 671 aa12.44□□□□□ -0.42
NIFKP1-201ENST00000398317 LMBR1LQ6UX01 489 aa12.44□□□□□ -0.42
NIFKP1-201ENST00000398317 JAG2Q9Y219 1238 aa12.44□□□□□ -0.42
NIFKP1-201ENST00000398317 F8W031 263 aaPredicted RBP12.43□□□□□ -0.42
NIFKP1-201ENST00000398317 GRM8O00222 908 aa12.43□□□□□ -0.42
NIFKP1-201ENST00000398317 SEMA3EO15041 775 aa12.43□□□□□ -0.42
NIFKP1-201ENST00000398317 NF2P35240 595 aa12.43□□□□□ -0.42
NIFKP1-201ENST00000398317 RGS19P49795 217 aa12.43□□□□□ -0.42
NIFKP1-201ENST00000398317 MLLT1Q03111 559 aaPredicted RBP12.43□□□□□ -0.42
NIFKP1-201ENST00000398317 TAF7LQ5H9L4 462 aa12.43□□□□□ -0.42
NIFKP1-201ENST00000398317 SLC4A10Q6U841 1118 aa12.43□□□□□ -0.42
NIFKP1-201ENST00000398317 CERS5Q8N5B7 392 aa12.43□□□□□ -0.42
NIFKP1-201ENST00000398317 ZBED3Q96IU2 234 aaPredicted RBP12.43□□□□□ -0.42
NIFKP1-201ENST00000398317 FZD1Q9UP38 647 aa12.43□□□□□ -0.42
NIFKP1-201ENST00000398317 PCDHAC2Q9Y5I4 1007 aa12.43□□□□□ -0.42
NIFKP1-201ENST00000398317 ECM29Q5VYK3 1845 aa12.43□□□□□ -0.42
NIFKP1-201ENST00000398317 COL9A1P20849 921 aa12.42□□□□□ -0.42
NIFKP1-201ENST00000398317 ZEB1P37275 1124 aaPredicted RBP12.42□□□□□ -0.42
NIFKP1-201ENST00000398317 MMP14P50281 582 aa12.42□□□□□ -0.42
NIFKP1-201ENST00000398317 PTPN12Q05209 780 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms