RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 IER5LQ5T953 404 aa4.76□□□□□ -1.65
UBE3A-202ENST00000397954 CNBD1Q8NA66 436 aa4.76□□□□□ -1.65
UBE3A-202ENST00000397954 TMEM87AQ8NBN3 555 aa4.76□□□□□ -1.65
UBE3A-202ENST00000397954 C1orf216Q8TAB5 229 aa4.76□□□□□ -1.65
UBE3A-202ENST00000397954 ZNF526Q8TF50 670 aaPredicted RBP4.76□□□□□ -1.65
UBE3A-202ENST00000397954 STK31Q9BXU1 1019 aa4.76□□□□□ -1.65
UBE3A-202ENST00000397954 CAPN10Q9HC96 672 aa4.76□□□□□ -1.65
UBE3A-202ENST00000397954 KDM2BQ8NHM5 1336 aa4.76□□□□□ -1.65
UBE3A-202ENST00000397954 SPEF2Q9C093 1822 aa4.76□□□□□ -1.65
UBE3A-202ENST00000397954 SERPINB2P05120 415 aa4.76□□□□□ -1.65
UBE3A-202ENST00000397954 DNAJA1P31689 397 aaKnown RBP4.76□□□□□ -1.65
UBE3A-202ENST00000397954 SF3B3Q15393 1217 aaKnown RBP4.76□□□□□ -1.65
UBE3A-202ENST00000397954 C15orf52Q6ZUT6 534 aaKnown RBP4.76□□□□□ -1.65
UBE3A-202ENST00000397954 RNF135Q8IUD6 432 aa4.76□□□□□ -1.65
UBE3A-202ENST00000397954 TRMT2AQ8IZ69 625 aaKnown RBP4.76□□□□□ -1.65
UBE3A-202ENST00000397954 ISCA1Q9BUE6 129 aa4.76□□□□□ -1.65
UBE3A-202ENST00000397954 FHDC1Q9C0D6 1143 aaPredicted RBP4.76□□□□□ -1.65
UBE3A-202ENST00000397954 MAP10Q9P2G4 905 aa4.76□□□□□ -1.65
UBE3A-202ENST00000397954 CEP126Q9P2H0 1117 aa4.76□□□□□ -1.65
UBE3A-202ENST00000397954 KLHL42Q9P2K6 505 aa4.76□□□□□ -1.65
UBE3A-202ENST00000397954 EGFL7Q9UHF1 273 aa4.76□□□□□ -1.65
UBE3A-202ENST00000397954 ADAMTS8Q9UP79 889 aa4.76□□□□□ -1.65
UBE3A-202ENST00000397954 ZBTB1Q9Y2K1 713 aa4.76□□□□□ -1.65
UBE3A-202ENST00000397954 NBPF26B4DH59 902 aa4.75□□□□□ -1.65
UBE3A-202ENST00000397954 MMP10P09238 476 aa4.75□□□□□ -1.65
UBE3A-202ENST00000397954 TCIRG1Q13488 830 aa4.75□□□□□ -1.65
UBE3A-202ENST00000397954 CCDC93Q567U6 631 aa4.75□□□□□ -1.65
UBE3A-202ENST00000397954 TMC7Q7Z402 723 aa4.75□□□□□ -1.65
UBE3A-202ENST00000397954 LARGE2Q8N3Y3 721 aa4.75□□□□□ -1.65
UBE3A-202ENST00000397954 TTLL6Q8N841 843 aa4.75□□□□□ -1.65
UBE3A-202ENST00000397954 TMA7Q9Y2S6 64 aaKnown RBP4.75□□□□□ -1.65
UBE3A-202ENST00000397954 UTYO14607 1347 aa4.75□□□□□ -1.65
UBE3A-202ENST00000397954 SFI1A8K8P3 1242 aa4.75□□□□□ -1.65
UBE3A-202ENST00000397954 PCCAP05165 728 aaPredicted RBP4.75□□□□□ -1.65
UBE3A-202ENST00000397954 FBLN1P23142 703 aa4.75□□□□□ -1.65
UBE3A-202ENST00000397954 FANCCQ00597 558 aa4.75□□□□□ -1.65
UBE3A-202ENST00000397954 NEXNQ0ZGT2 675 aa4.75□□□□□ -1.65
UBE3A-202ENST00000397954 ASTLQ6HA08 431 aaPredicted RBP4.75□□□□□ -1.65
UBE3A-202ENST00000397954 TICAM2Q86XR7 235 aa4.75□□□□□ -1.65
UBE3A-202ENST00000397954 ZSCAN29Q8IWY8 852 aaPredicted RBP4.75□□□□□ -1.65
UBE3A-202ENST00000397954 RGL4Q8IZJ4 473 aa4.75□□□□□ -1.65
UBE3A-202ENST00000397954 UTP14AQ9BVJ6 771 aaKnown RBP4.75□□□□□ -1.65
UBE3A-202ENST00000397954 MRS2Q9HD23 443 aa4.75□□□□□ -1.65
UBE3A-202ENST00000397954 SLX4Q8IY92 1834 aa4.75□□□□□ -1.65
UBE3A-202ENST00000397954 MYO3BQ8WXR4 1341 aa4.75□□□□□ -1.65
UBE3A-202ENST00000397954 TLDC2A0PJX2 215 aa4.75□□□□□ -1.65
UBE3A-202ENST00000397954 FMNL1O95466 1100 aaPredicted RBP4.75□□□□□ -1.65
UBE3A-202ENST00000397954 MAP4K4O95819 1239 aaPredicted RBP4.75□□□□□ -1.65
UBE3A-202ENST00000397954 NAA30Q147X3 362 aaPredicted RBP4.75□□□□□ -1.65
UBE3A-202ENST00000397954 NFIXQ14938 502 aa4.75□□□□□ -1.65
UBE3A-202ENST00000397954 EGFLAMQ63HQ2 1017 aa4.75□□□□□ -1.65
UBE3A-202ENST00000397954 PHTF2Q8N3S3 785 aa4.75□□□□□ -1.65
UBE3A-202ENST00000397954 OCSTAMPQ9BR26 566 aa4.75□□□□□ -1.65
UBE3A-202ENST00000397954 BCL2L12Q9HB09 334 aa4.75□□□□□ -1.65
UBE3A-202ENST00000397954 DNAAF2Q9NVR5 837 aaKnown RBP4.75□□□□□ -1.65
UBE3A-202ENST00000397954 FKBPLQ9UIM3 349 aa4.75□□□□□ -1.65
UBE3A-202ENST00000397954 SH3TC1Q8TE82 1336 aa4.74□□□□□ -1.65
UBE3A-202ENST00000397954 C19orf67A6NJJ6 358 aa4.74□□□□□ -1.65
UBE3A-202ENST00000397954 LMNB1P20700 586 aa4.74□□□□□ -1.65
UBE3A-202ENST00000397954 RPS12P25398 132 aaKnown RBP4.74□□□□□ -1.65
UBE3A-202ENST00000397954 FKBP4Q02790 459 aaKnown RBP eCLIP4.74□□□□□ -1.65
UBE3A-202ENST00000397954 FAM182BQ5T319 152 aa4.74□□□□□ -1.65
UBE3A-202ENST00000397954 SWT1Q5T5J6 900 aaKnown RBP4.74□□□□□ -1.65
UBE3A-202ENST00000397954 C3orf67Q6ZVT6 689 aa4.74□□□□□ -1.65
UBE3A-202ENST00000397954 NOP9Q86U38 636 aaKnown RBP4.74□□□□□ -1.65
UBE3A-202ENST00000397954 SPACA7Q96KW9 195 aa4.74□□□□□ -1.65
UBE3A-202ENST00000397954 EYA3Q99504 573 aa4.74□□□□□ -1.65
UBE3A-202ENST00000397954 ABCC12Q96J65 1359 aa4.74□□□□□ -1.65
UBE3A-202ENST00000397954 PDS5AQ29RF7 1337 aaKnown RBP4.74□□□□□ -1.65
UBE3A-202ENST00000397954 ZBED9Q6R2W3 1325 aa4.74□□□□□ -1.65
UBE3A-202ENST00000397954 POTEFA5A3E0 1075 aa4.74□□□□□ -1.65
UBE3A-202ENST00000397954 PSDA5PKW4 1024 aaPredicted RBP4.74□□□□□ -1.65
UBE3A-202ENST00000397954 IQCA1LA6NCM1 817 aa4.74□□□□□ -1.65
UBE3A-202ENST00000397954 ZBTB7BO15156 539 aaPredicted RBP4.74□□□□□ -1.65
UBE3A-202ENST00000397954 NTSR2O95665 410 aa4.74□□□□□ -1.65
UBE3A-202ENST00000397954 CAPN2P17655 700 aa4.74□□□□□ -1.65
UBE3A-202ENST00000397954 FKBP5Q13451 457 aaPredicted RBP4.74□□□□□ -1.65
UBE3A-202ENST00000397954 USPL1Q5W0Q7 1092 aa4.74□□□□□ -1.65
UBE3A-202ENST00000397954 TRAF7Q6Q0C0 670 aa4.74□□□□□ -1.65
UBE3A-202ENST00000397954 KSR2Q6VAB6 950 aa4.74□□□□□ -1.65
UBE3A-202ENST00000397954 SP8Q8IXZ3 490 aa4.74□□□□□ -1.65
UBE3A-202ENST00000397954 ZBTB38Q8NAP3 1195 aaPredicted RBP4.74□□□□□ -1.65
UBE3A-202ENST00000397954 CDC5LQ99459 802 aaKnown RBP4.74□□□□□ -1.65
UBE3A-202ENST00000397954 METTL22Q9BUU2 404 aaPredicted RBP4.74□□□□□ -1.65
UBE3A-202ENST00000397954 ZSWIM4Q9H7M6 989 aa4.74□□□□□ -1.65
UBE3A-202ENST00000397954 TRIM6-TRIM34B2RNG4 842 aa4.73□□□□□ -1.65
UBE3A-202ENST00000397954 LZTS3O60299 673 aaPredicted RBP4.73□□□□□ -1.65
UBE3A-202ENST00000397954 SRGNP10124 158 aa4.73□□□□□ -1.65
UBE3A-202ENST00000397954 ATP2B1P20020 1258 aa4.73□□□□□ -1.65
UBE3A-202ENST00000397954 DDR1Q08345 913 aa4.73□□□□□ -1.65
UBE3A-202ENST00000397954 TCEAL1Q15170 157 aa4.73□□□□□ -1.65
UBE3A-202ENST00000397954 DUSP27Q5VZP5 1158 aa4.73□□□□□ -1.65
UBE3A-202ENST00000397954 PRR5LQ6MZQ0 368 aa4.73□□□□□ -1.65
UBE3A-202ENST00000397954 PTF1AQ7RTS3 328 aa4.73□□□□□ -1.65
UBE3A-202ENST00000397954 NBPF5PQ86XG9 351 aaPredicted RBP4.73□□□□□ -1.65
UBE3A-202ENST00000397954 MBIPQ9NS73 344 aa4.73□□□□□ -1.65
UBE3A-202ENST00000397954 PARP2Q9UGN5 583 aa4.73□□□□□ -1.65
UBE3A-202ENST00000397954 WWC3Q9ULE0 1092 aa4.73□□□□□ -1.65
UBE3A-202ENST00000397954 PPME1Q9Y570 386 aa4.73□□□□□ -1.65
UBE3A-202ENST00000397954 IPO8O15397 1037 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms