RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 GPAA1O43292 621 aa23.07■■□□□ 1.28
PDLIM2-204ENST00000397760 CYP7A1P22680 504 aa23.07■■□□□ 1.28
PDLIM2-204ENST00000397760 RAB3GAP1Q15042 981 aa23.07■■□□□ 1.28
PDLIM2-204ENST00000397760 GBP4Q96PP9 640 aa23.07■■□□□ 1.28
PDLIM2-204ENST00000397760 PALD1Q9ULE6 856 aa23.07■■□□□ 1.28
PDLIM2-204ENST00000397760 DOCK2Q92608 1830 aa23.06■■□□□ 1.28
PDLIM2-204ENST00000397760 FSD2A1L4K1 749 aa23.06■■□□□ 1.28
PDLIM2-204ENST00000397760 TRAK2O60296 914 aa23.06■■□□□ 1.28
PDLIM2-204ENST00000397760 VPS53Q5VIR6 699 aa23.06■■□□□ 1.28
PDLIM2-204ENST00000397760 NAA16Q6N069 864 aaPredicted RBP23.06■■□□□ 1.28
PDLIM2-204ENST00000397760 NSUN4Q96CB9 384 aaKnown RBP23.06■■□□□ 1.28
PDLIM2-204ENST00000397760 DSCC1Q9BVC3 393 aa23.06■■□□□ 1.28
PDLIM2-204ENST00000397760 FAM205AQ6ZU69 1335 aa23.06■■□□□ 1.28
PDLIM2-204ENST00000397760 LDHBP07195 334 aaKnown RBP23.05■■□□□ 1.28
PDLIM2-204ENST00000397760 HSPD1P10809 573 aaKnown RBP23.05■■□□□ 1.28
PDLIM2-204ENST00000397760 ANAPC15P60006 121 aa23.05■■□□□ 1.28
PDLIM2-204ENST00000397760 GTF2IP78347 998 aa23.05■■□□□ 1.28
PDLIM2-204ENST00000397760 MECOMQ03112 1051 aa23.05■■□□□ 1.28
PDLIM2-204ENST00000397760 KIAA2012Q0VF49 1180 aa23.05■■□□□ 1.28
PDLIM2-204ENST00000397760 NECTIN1Q15223 517 aa23.05■■□□□ 1.28
PDLIM2-204ENST00000397760 AOC3Q16853 763 aa23.05■■□□□ 1.28
PDLIM2-204ENST00000397760 AIDAQ96BJ3 306 aa23.05■■□□□ 1.28
PDLIM2-204ENST00000397760 PSMD1Q99460 953 aa23.05■■□□□ 1.28
PDLIM2-204ENST00000397760 MYO5AQ9Y4I1 1855 aaKnown RBP23.05■■□□□ 1.28
PDLIM2-204ENST00000397760 PODNQ7Z5L7 613 aa23.05■■□□□ 1.28
PDLIM2-204ENST00000397760 TBC1D22AQ8WUA7 517 aa23.05■■□□□ 1.28
PDLIM2-204ENST00000397760 DBNDD1Q9H9R9 158 aa23.05■■□□□ 1.28
PDLIM2-204ENST00000397760 IGSF3O75054 1194 aa23.04■■□□□ 1.28
PDLIM2-204ENST00000397760 ZNF384Q8TF68 577 aa23.04■■□□□ 1.28
PDLIM2-204ENST00000397760 U3KPZ7 1027 aaPredicted RBP23.04■■□□□ 1.28
PDLIM2-204ENST00000397760 MYH7P12883 1935 aa23.03■■□□□ 1.28
PDLIM2-204ENST00000397760 PPIP5K2O43314 1243 aa23.03■■□□□ 1.28
PDLIM2-204ENST00000397760 SKOR2Q2VWA4 1001 aaPredicted RBP23.03■■□□□ 1.28
PDLIM2-204ENST00000397760 MFSD14BQ5SR56 506 aa23.03■■□□□ 1.28
PDLIM2-204ENST00000397760 CLEC17AQ6ZS10 378 aa23.03■■□□□ 1.28
PDLIM2-204ENST00000397760 ADGRA1Q86SQ6 560 aa23.03■■□□□ 1.28
PDLIM2-204ENST00000397760 DZIP1Q86YF9 867 aaKnown RBP23.03■■□□□ 1.28
PDLIM2-204ENST00000397760 NLGN2Q8NFZ4 835 aa23.03■■□□□ 1.28
PDLIM2-204ENST00000397760 FBXW7Q969H0 707 aa23.03■■□□□ 1.28
PDLIM2-204ENST00000397760 STRBPQ96SI9 672 aaKnown RBP23.03■■□□□ 1.28
PDLIM2-204ENST00000397760 GOLGA6L3A6NEY3 463 aa23.03■■□□□ 1.28
PDLIM2-204ENST00000397760 MBD4O95243 580 aa23.03■■□□□ 1.28
PDLIM2-204ENST00000397760 GRIK5Q16478 980 aa23.03■■□□□ 1.28
PDLIM2-204ENST00000397760 CREB3L3Q68CJ9 461 aa23.03■■□□□ 1.28
PDLIM2-204ENST00000397760 TTLL5Q6EMB2 1281 aa23.03■■□□□ 1.28
PDLIM2-204ENST00000397760 TMED8Q6PL24 325 aaPredicted RBP23.03■■□□□ 1.28
PDLIM2-204ENST00000397760 MIGA1Q8NAN2 632 aa23.03■■□□□ 1.28
PDLIM2-204ENST00000397760 BCS1LQ9Y276 419 aa23.03■■□□□ 1.28
PDLIM2-204ENST00000397760 MYH13Q9UKX3 1938 aa23.03■■□□□ 1.28
PDLIM2-204ENST00000397760 ECE2O60344 883 aa23.02■■□□□ 1.28
PDLIM2-204ENST00000397760 RASEFQ8IZ41 740 aa23.02■■□□□ 1.28
PDLIM2-204ENST00000397760 ARMT1Q9H993 441 aa23.02■■□□□ 1.28
PDLIM2-204ENST00000397760 SNX14Q9Y5W7 946 aa23.02■■□□□ 1.28
PDLIM2-204ENST00000397760 SLC27A2O14975 620 aa23.01■■□□□ 1.27
PDLIM2-204ENST00000397760 RNF20Q5VTR2 975 aa23.01■■□□□ 1.27
PDLIM2-204ENST00000397760 FAM43AQ8N2R8 423 aa23.01■■□□□ 1.27
PDLIM2-204ENST00000397760 KCNB2Q92953 911 aa23.01■■□□□ 1.27
PDLIM2-204ENST00000397760 IL17RAQ96F46 866 aa23.01■■□□□ 1.27
PDLIM2-204ENST00000397760 MAGEB6P1A0A0J9YX57 407 aa23.01■■□□□ 1.27
PDLIM2-204ENST00000397760 FOXP2O15409 715 aa23.01■■□□□ 1.27
PDLIM2-204ENST00000397760 HSP90AA1P07900 732 aaKnown RBP23.01■■□□□ 1.27
PDLIM2-204ENST00000397760 ZKSCAN1P17029 563 aaPredicted RBP23.01■■□□□ 1.27
PDLIM2-204ENST00000397760 TNPO1Q92973 898 aaKnown RBP23.01■■□□□ 1.27
PDLIM2-204ENST00000397760 ZNF277Q9NRM2 450 aaPredicted RBP23.01■■□□□ 1.27
PDLIM2-204ENST00000397760 LCORLQ8N3X6 602 aa23■■□□□ 1.27
PDLIM2-204ENST00000397760 GSTO1P78417 241 aa22.99■■□□□ 1.27
PDLIM2-204ENST00000397760 VPS33BQ9H267 617 aa22.99■■□□□ 1.27
PDLIM2-204ENST00000397760 KCNQ5Q9NR82 932 aa22.99■■□□□ 1.27
PDLIM2-204ENST00000397760 APPP05067 770 aa22.98■■□□□ 1.27
PDLIM2-204ENST00000397760 GNAT2P19087 354 aa22.98■■□□□ 1.27
PDLIM2-204ENST00000397760 FHDC1Q9C0D6 1143 aaPredicted RBP22.98■■□□□ 1.27
PDLIM2-204ENST00000397760 PATL2C9JE40 543 aaKnown RBP22.98■■□□□ 1.27
PDLIM2-204ENST00000397760 LARGE2Q8N3Y3 721 aa22.98■■□□□ 1.27
PDLIM2-204ENST00000397760 RIOK1Q9BRS2 568 aaKnown RBP22.98■■□□□ 1.27
PDLIM2-204ENST00000397760 CTNNA3Q9UI47 895 aa22.98■■□□□ 1.27
PDLIM2-204ENST00000397760 SUGT1Q9Y2Z0 365 aa22.98■■□□□ 1.27
PDLIM2-204ENST00000397760 CD2BP2O95400 341 aaKnown RBP22.97■■□□□ 1.27
PDLIM2-204ENST00000397760 FGAP02671 866 aa22.97■■□□□ 1.27
PDLIM2-204ENST00000397760 DYNLL1P63167 89 aaKnown RBP22.97■■□□□ 1.27
PDLIM2-204ENST00000397760 STRIP1Q5VSL9 837 aa22.97■■□□□ 1.27
PDLIM2-204ENST00000397760 CERS5Q8N5B7 392 aa22.97■■□□□ 1.27
PDLIM2-204ENST00000397760 LDHCP07864 332 aa22.96■■□□□ 1.27
PDLIM2-204ENST00000397760 DIXDC1Q155Q3 683 aa22.96■■□□□ 1.27
PDLIM2-204ENST00000397760 MXD3Q9BW11 206 aa22.96■■□□□ 1.27
PDLIM2-204ENST00000397760 TAOK3Q9H2K8 898 aa22.96■■□□□ 1.27
PDLIM2-204ENST00000397760 SLC4A4Q9Y6R1 1079 aa22.96■■□□□ 1.27
PDLIM2-204ENST00000397760 USP17L3A6NCW0 530 aa22.96■■□□□ 1.27
PDLIM2-204ENST00000397760 USP17L4A6NCW7 530 aa22.96■■□□□ 1.27
PDLIM2-204ENST00000397760 PRKAB2O43741 272 aa22.96■■□□□ 1.27
PDLIM2-204ENST00000397760 CYP21A2P08686 494 aa22.96■■□□□ 1.27
PDLIM2-204ENST00000397760 MRE11P49959 708 aa22.96■■□□□ 1.27
PDLIM2-204ENST00000397760 USP17L1Q7RTZ2 530 aa22.96■■□□□ 1.27
PDLIM2-204ENST00000397760 AATFQ9NY61 560 aaKnown RBP eCLIP22.96■■□□□ 1.27
PDLIM2-204ENST00000397760 BRCA1P38398 1863 aaKnown RBP22.96■■□□□ 1.27
PDLIM2-204ENST00000397760 CHD4Q14839 1912 aa22.95■■□□□ 1.26
PDLIM2-204ENST00000397760 IARSP41252 1262 aaKnown RBP22.95■■□□□ 1.26
PDLIM2-204ENST00000397760 TSGA10IPQ3SY00 556 aa22.95■■□□□ 1.26
PDLIM2-204ENST00000397760 TAF6LQ9Y6J9 622 aa22.95■■□□□ 1.26
PDLIM2-204ENST00000397760 YDJCA8MPS7 323 aa22.94■■□□□ 1.26
PDLIM2-204ENST00000397760 GSG1L2A8MUP6 293 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms