RNA–Protein interactions for RNA: ENST00000397459.6

CNTN4-201, Transcript of contactin 4, humanhuman

TSL 1 (best) BASIC

Gene CNTN4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-201ENST00000397459 ZSCAN12O43309 604 aa9.43□□□□□ -0.9
CNTN4-201ENST00000397459 PIP4K2AP48426 406 aaPredicted RBP9.43□□□□□ -0.9
CNTN4-201ENST00000397459 FOXO4P98177 505 aa9.43□□□□□ -0.9
CNTN4-201ENST00000397459 APOBRQ0VD83 1088 aa9.43□□□□□ -0.9
CNTN4-201ENST00000397459 TRIM28Q13263 835 aaKnown RBP9.43□□□□□ -0.9
CNTN4-201ENST00000397459 BMS1Q14692 1282 aaKnown RBP9.43□□□□□ -0.9
CNTN4-201ENST00000397459 TTF1Q15361 905 aaPredicted RBP9.43□□□□□ -0.9
CNTN4-201ENST00000397459 ATP2B3Q16720 1220 aa9.43□□□□□ -0.9
CNTN4-201ENST00000397459 CCDC144BQ3MJ40 725 aa9.43□□□□□ -0.9
CNTN4-201ENST00000397459 TPRNQ4KMQ1 711 aa9.43□□□□□ -0.9
CNTN4-201ENST00000397459 MYSM1Q5VVJ2 828 aa9.43□□□□□ -0.9
CNTN4-201ENST00000397459 LMBR1LQ6UX01 489 aa9.43□□□□□ -0.9
CNTN4-201ENST00000397459 DDX46Q7L014 1031 aaKnown RBP9.43□□□□□ -0.9
CNTN4-201ENST00000397459 CCDC144CPQ8IYA2 1237 aa9.43□□□□□ -0.9
CNTN4-201ENST00000397459 AOPEPQ8N6M6 819 aa9.43□□□□□ -0.9
CNTN4-201ENST00000397459 WASF1Q92558 559 aa9.43□□□□□ -0.9
CNTN4-201ENST00000397459 ZFP91Q96JP5 570 aaPredicted RBP9.43□□□□□ -0.9
CNTN4-201ENST00000397459 PLA2G12BQ9BX93 195 aa9.43□□□□□ -0.9
CNTN4-201ENST00000397459 GOLPH3LQ9H4A5 285 aa9.43□□□□□ -0.9
CNTN4-201ENST00000397459 CEP126Q9P2H0 1117 aa9.43□□□□□ -0.9
CNTN4-201ENST00000397459 NRBP1Q9UHY1 535 aa9.43□□□□□ -0.9
CNTN4-201ENST00000397459 PHLPP1O60346 1717 aa9.42□□□□□ -0.9
CNTN4-201ENST00000397459 PAPPAQ13219 1627 aa9.42□□□□□ -0.9
CNTN4-201ENST00000397459 GOLIM4O00461 696 aa9.42□□□□□ -0.9
CNTN4-201ENST00000397459 PIP4K2BP78356 416 aa9.42□□□□□ -0.9
CNTN4-201ENST00000397459 TRDNQ13061 729 aa9.42□□□□□ -0.9
CNTN4-201ENST00000397459 ATG9AQ7Z3C6 839 aa9.42□□□□□ -0.9
CNTN4-201ENST00000397459 FAM53CQ9NYF3 392 aa9.42□□□□□ -0.9
CNTN4-201ENST00000397459 TUBE1Q9UJT0 475 aa9.42□□□□□ -0.9
CNTN4-201ENST00000397459 TAF6LQ9Y6J9 622 aa9.42□□□□□ -0.9
CNTN4-201ENST00000397459 TJP1Q07157 1748 aa9.42□□□□□ -0.9
CNTN4-201ENST00000397459 STK36Q9NRP7 1315 aa9.42□□□□□ -0.9
CNTN4-201ENST00000397459 RCAN1P53805 252 aa9.42□□□□□ -0.9
CNTN4-201ENST00000397459 SLC39A14Q15043 492 aa9.42□□□□□ -0.9
CNTN4-201ENST00000397459 ANO1Q5XXA6 986 aa9.42□□□□□ -0.9
CNTN4-201ENST00000397459 TMED8Q6PL24 325 aaPredicted RBP9.42□□□□□ -0.9
CNTN4-201ENST00000397459 TMEM87BQ96K49 555 aa9.42□□□□□ -0.9
CNTN4-201ENST00000397459 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.42□□□□□ -0.9
CNTN4-201ENST00000397459 DISP2A7MBM2 1401 aa9.42□□□□□ -0.9
CNTN4-201ENST00000397459 TOGARAM1Q9Y4F4 1720 aa9.41□□□□□ -0.9
CNTN4-201ENST00000397459 ADAMTS2O95450 1211 aa9.41□□□□□ -0.9
CNTN4-201ENST00000397459 U2AF2P26368 475 aaKnown RBP eCLIP9.41□□□□□ -0.9
CNTN4-201ENST00000397459 TUBB2AQ13885 445 aa9.41□□□□□ -0.9
CNTN4-201ENST00000397459 MB21D2Q8IYB1 491 aaPredicted RBP9.41□□□□□ -0.9
CNTN4-201ENST00000397459 KLHDC4Q8TBB5 520 aa9.41□□□□□ -0.9
CNTN4-201ENST00000397459 TUBB2BQ9BVA1 445 aa9.41□□□□□ -0.9
CNTN4-201ENST00000397459 TEX13AQ9BXU3 409 aaPredicted RBP9.41□□□□□ -0.9
CNTN4-201ENST00000397459 ORC3Q9UBD5 711 aaPredicted RBP9.41□□□□□ -0.9
CNTN4-201ENST00000397459 NID2Q14112 1375 aa9.41□□□□□ -0.9
CNTN4-201ENST00000397459 MYL5Q02045 173 aa9.4□□□□□ -0.9
CNTN4-201ENST00000397459 KANK3Q6NY19 840 aa9.4□□□□□ -0.9
CNTN4-201ENST00000397459 OLFM4Q6UX06 510 aa9.4□□□□□ -0.9
CNTN4-201ENST00000397459 CCDC129Q6ZRS4 1044 aa9.4□□□□□ -0.9
CNTN4-201ENST00000397459 TRIML1Q8N9V2 468 aa9.4□□□□□ -0.9
CNTN4-201ENST00000397459 NEUROD6Q96NK8 337 aa9.4□□□□□ -0.9
CNTN4-201ENST00000397459 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.4□□□□□ -0.9
CNTN4-201ENST00000397459 KCPQ6ZWJ8 1503 aa9.4□□□□□ -0.9
CNTN4-201ENST00000397459 A0A1B0GUL7 405 aa9.4□□□□□ -0.9
CNTN4-201ENST00000397459 TOM1O60784 492 aa9.4□□□□□ -0.9
CNTN4-201ENST00000397459 CUTAO60888 179 aa9.4□□□□□ -0.9
CNTN4-201ENST00000397459 PTCD1O75127 700 aaKnown RBP9.4□□□□□ -0.9
CNTN4-201ENST00000397459 ZNF202O95125 648 aa9.4□□□□□ -0.9
CNTN4-201ENST00000397459 TTC39AQ5SRH9 613 aa9.4□□□□□ -0.9
CNTN4-201ENST00000397459 JAKMIP3Q5VZ66 844 aa9.4□□□□□ -0.9
CNTN4-201ENST00000397459 TEX2Q8IWB9 1127 aa9.4□□□□□ -0.9
CNTN4-201ENST00000397459 EDC3Q96F86 508 aaKnown RBP9.4□□□□□ -0.9
CNTN4-201ENST00000397459 MPHOSPH8Q99549 860 aa9.4□□□□□ -0.9
CNTN4-201ENST00000397459 GOLGA8BA8MQT2 603 aa9.39□□□□□ -0.91
CNTN4-201ENST00000397459 NBPF26B4DH59 902 aa9.39□□□□□ -0.91
CNTN4-201ENST00000397459 ZNF213O14771 459 aa9.39□□□□□ -0.91
CNTN4-201ENST00000397459 PRC1O43663 620 aa9.39□□□□□ -0.91
CNTN4-201ENST00000397459 SMC2O95347 1197 aa9.39□□□□□ -0.91
CNTN4-201ENST00000397459 FDPSP14324 419 aaKnown RBP9.39□□□□□ -0.91
CNTN4-201ENST00000397459 ETF1P62495 437 aaKnown RBP9.39□□□□□ -0.91
CNTN4-201ENST00000397459 KIF23Q02241 960 aaPredicted RBP9.39□□□□□ -0.91
CNTN4-201ENST00000397459 TRIM29Q14134 588 aa9.39□□□□□ -0.91
CNTN4-201ENST00000397459 CCDC57Q2TAC2 916 aa9.39□□□□□ -0.91
CNTN4-201ENST00000397459 NBPF14Q5TI25 921 aa9.39□□□□□ -0.91
CNTN4-201ENST00000397459 NBPF10Q6P3W6 841 aaKnown RBP9.39□□□□□ -0.91
CNTN4-201ENST00000397459 ILDR1Q86SU0 546 aaPredicted RBP9.39□□□□□ -0.91
CNTN4-201ENST00000397459 NBPF15Q8N660 670 aa9.39□□□□□ -0.91
CNTN4-201ENST00000397459 SEC62Q99442 399 aaKnown RBP9.39□□□□□ -0.91
CNTN4-201ENST00000397459 DNAI1Q9UI46 699 aa9.39□□□□□ -0.91
CNTN4-201ENST00000397459 MYH7P12883 1935 aa9.39□□□□□ -0.91
CNTN4-201ENST00000397459 TNS2Q63HR2 1409 aa9.39□□□□□ -0.91
CNTN4-201ENST00000397459 KLF18A0A0U1RQI7 1052 aa9.39□□□□□ -0.91
CNTN4-201ENST00000397459 NUTM2BA6NNL0 878 aaPredicted RBP9.39□□□□□ -0.91
CNTN4-201ENST00000397459 NUTM2EB1AL46 878 aaPredicted RBP9.39□□□□□ -0.91
CNTN4-201ENST00000397459 ARHGAP6O43182 974 aa9.39□□□□□ -0.91
CNTN4-201ENST00000397459 H2AFXP16104 143 aaPredicted RBP9.39□□□□□ -0.91
CNTN4-201ENST00000397459 SYKP43405 635 aa9.39□□□□□ -0.91
CNTN4-201ENST00000397459 NDUFA8P51970 172 aa9.39□□□□□ -0.91
CNTN4-201ENST00000397459 CCT2P78371 535 aaKnown RBP9.39□□□□□ -0.91
CNTN4-201ENST00000397459 ALX1Q15699 326 aa9.39□□□□□ -0.91
CNTN4-201ENST00000397459 CCDC93Q567U6 631 aa9.39□□□□□ -0.91
CNTN4-201ENST00000397459 GORABQ5T7V8 394 aa9.39□□□□□ -0.91
CNTN4-201ENST00000397459 NUTM2AQ8IVF1 878 aaPredicted RBP9.39□□□□□ -0.91
CNTN4-201ENST00000397459 PIGBQ92521 554 aa9.39□□□□□ -0.91
CNTN4-201ENST00000397459 TSC1Q92574 1164 aa9.39□□□□□ -0.91
CNTN4-201ENST00000397459 ZNF592Q92610 1267 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms