RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 MTMR14Q8NCE2 650 aa25.97■■□□□ 1.75
TSPAN4-206ENST00000397408 SPDYE2BA6NHP3 402 aa25.96■■□□□ 1.75
TSPAN4-206ENST00000397408 TRAF5O00463 557 aa25.96■■□□□ 1.75
TSPAN4-206ENST00000397408 LDHBP07195 334 aaKnown RBP25.96■■□□□ 1.75
TSPAN4-206ENST00000397408 SPDYE6P0CI01 402 aa25.96■■□□□ 1.75
TSPAN4-206ENST00000397408 HDAC1Q13547 482 aaPredicted RBP25.96■■□□□ 1.75
TSPAN4-206ENST00000397408 CDC37L1Q7L3B6 337 aa25.96■■□□□ 1.75
TSPAN4-206ENST00000397408 ZNF512BQ96KM6 892 aaPredicted RBP25.96■■□□□ 1.75
TSPAN4-206ENST00000397408 ABCF2Q9UG63 623 aa25.96■■□□□ 1.75
TSPAN4-206ENST00000397408 POLR2AP24928 1970 aaKnown RBP25.95■■□□□ 1.75
TSPAN4-206ENST00000397408 KRT26Q7Z3Y9 468 aa25.95■■□□□ 1.74
TSPAN4-206ENST00000397408 SNRKQ9NRH2 765 aa25.95■■□□□ 1.74
TSPAN4-206ENST00000397408 AKAP11Q9UKA4 1901 aa25.94■■□□□ 1.74
TSPAN4-206ENST00000397408 PITPNM2Q9BZ72 1349 aa25.94■■□□□ 1.74
TSPAN4-206ENST00000397408 ADM5C9JUS6 153 aa25.94■■□□□ 1.74
TSPAN4-206ENST00000397408 HDLBPQ00341 1268 aaKnown RBP25.94■■□□□ 1.74
TSPAN4-206ENST00000397408 FMR1Q06787 632 aaKnown RBP eCLIP25.94■■□□□ 1.74
TSPAN4-206ENST00000397408 SULF1Q8IWU6 871 aa25.94■■□□□ 1.74
TSPAN4-206ENST00000397408 TEKT1Q969V4 418 aa25.94■■□□□ 1.74
TSPAN4-206ENST00000397408 APLP1P51693 650 aa25.93■■□□□ 1.74
TSPAN4-206ENST00000397408 USP48Q86UV5 1035 aa25.93■■□□□ 1.74
TSPAN4-206ENST00000397408 PRMT6Q96LA8 375 aaPredicted RBP25.93■■□□□ 1.74
TSPAN4-206ENST00000397408 ECM29Q5VYK3 1845 aa25.93■■□□□ 1.74
TSPAN4-206ENST00000397408 AOX1Q06278 1338 aa25.92■■□□□ 1.74
TSPAN4-206ENST00000397408 SCAF8Q9UPN6 1271 aaKnown RBP25.92■■□□□ 1.74
TSPAN4-206ENST00000397408 MYO1BO43795 1136 aa25.91■■□□□ 1.74
TSPAN4-206ENST00000397408 SPTY2D1Q68D10 685 aaPredicted RBP25.91■■□□□ 1.74
TSPAN4-206ENST00000397408 TBC1D9Q6ZT07 1266 aa25.91■■□□□ 1.74
TSPAN4-206ENST00000397408 DZIP1Q86YF9 867 aaKnown RBP25.91■■□□□ 1.74
TSPAN4-206ENST00000397408 CLRN2A0PK11 232 aa25.9■■□□□ 1.74
TSPAN4-206ENST00000397408 ZAP70P43403 619 aa25.9■■□□□ 1.74
TSPAN4-206ENST00000397408 DIXDC1Q155Q3 683 aa25.9■■□□□ 1.74
TSPAN4-206ENST00000397408 DLK2Q6UY11 383 aa25.9■■□□□ 1.74
TSPAN4-206ENST00000397408 MRIQ9BWK5 157 aa25.9■■□□□ 1.74
TSPAN4-206ENST00000397408 ERICH6Q7L0X2 663 aa25.89■■□□□ 1.74
TSPAN4-206ENST00000397408 APOBEC3FQ8IUX4 373 aaKnown RBP25.89■■□□□ 1.74
TSPAN4-206ENST00000397408 ZDHHC15Q96MV8 337 aa25.89■■□□□ 1.74
TSPAN4-206ENST00000397408 RWDD1Q9H446 243 aaPredicted RBP25.89■■□□□ 1.74
TSPAN4-206ENST00000397408 HHIPL2Q6UWX4 724 aa25.88■■□□□ 1.73
TSPAN4-206ENST00000397408 GCC1Q96CN9 775 aa25.88■■□□□ 1.73
TSPAN4-206ENST00000397408 TDRD3Q9H7E2 651 aaKnown RBP25.88■■□□□ 1.73
TSPAN4-206ENST00000397408 TRPM7Q96QT4 1865 aa25.88■■□□□ 1.73
TSPAN4-206ENST00000397408 CYP2E1P05181 493 aaPredicted RBP25.88■■□□□ 1.73
TSPAN4-206ENST00000397408 HTRA3P83110 453 aa25.88■■□□□ 1.73
TSPAN4-206ENST00000397408 ZNF408Q9H9D4 720 aa25.88■■□□□ 1.73
TSPAN4-206ENST00000397408 VEZTQ9HBM0 779 aa25.88■■□□□ 1.73
TSPAN4-206ENST00000397408 DAGLAQ9Y4D2 1042 aa25.88■■□□□ 1.73
TSPAN4-206ENST00000397408 NDUFB9Q9Y6M9 179 aa25.88■■□□□ 1.73
TSPAN4-206ENST00000397408 SPDYE2Q495Y8 402 aa25.87■■□□□ 1.73
TSPAN4-206ENST00000397408 RAI14Q9P0K7 980 aa25.87■■□□□ 1.73
TSPAN4-206ENST00000397408 LRP2BPQ9P2M1 347 aa25.87■■□□□ 1.73
TSPAN4-206ENST00000397408 ZNF70Q9UC06 446 aaPredicted RBP25.87■■□□□ 1.73
TSPAN4-206ENST00000397408 MYH2Q9UKX2 1941 aa25.86■■□□□ 1.73
TSPAN4-206ENST00000397408 TMEM88BA6NKF7 163 aa25.86■■□□□ 1.73
TSPAN4-206ENST00000397408 CELF2O95319 508 aaKnown RBP25.86■■□□□ 1.73
TSPAN4-206ENST00000397408 MECOMQ03112 1051 aa25.86■■□□□ 1.73
TSPAN4-206ENST00000397408 APOBEC3HQ6NTF7 200 aaKnown RBP25.86■■□□□ 1.73
TSPAN4-206ENST00000397408 MAST2Q6P0Q8 1798 aa25.85■■□□□ 1.73
TSPAN4-206ENST00000397408 IGHDP01880 384 aa25.85■■□□□ 1.73
TSPAN4-206ENST00000397408 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.85■■□□□ 1.73
TSPAN4-206ENST00000397408 CDCA5Q96FF9 252 aa25.85■■□□□ 1.73
TSPAN4-206ENST00000397408 PIH1D3Q9NQM4 214 aaKnown RBP25.85■■□□□ 1.73
TSPAN4-206ENST00000397408 CREBZFQ9NS37 354 aa25.85■■□□□ 1.73
TSPAN4-206ENST00000397408 ZBTB47Q9UFB7 747 aaPredicted RBP25.85■■□□□ 1.73
TSPAN4-206ENST00000397408 ANKRD45Q5TZF3 282 aa25.84■■□□□ 1.73
TSPAN4-206ENST00000397408 CST9Q5W186 159 aa25.84■■□□□ 1.73
TSPAN4-206ENST00000397408 SLF2Q8IX21 1173 aa25.84■■□□□ 1.73
TSPAN4-206ENST00000397408 ZNF384Q8TF68 577 aa25.84■■□□□ 1.73
TSPAN4-206ENST00000397408 NSUN4Q96CB9 384 aaKnown RBP25.84■■□□□ 1.73
TSPAN4-206ENST00000397408 DNAJC2Q99543 621 aaKnown RBP25.83■■□□□ 1.73
TSPAN4-206ENST00000397408 GAKO14976 1311 aa25.83■■□□□ 1.73
TSPAN4-206ENST00000397408 MYO5AQ9Y4I1 1855 aaKnown RBP25.83■■□□□ 1.73
TSPAN4-206ENST00000397408 CENPBP07199 599 aaPredicted RBP25.82■■□□□ 1.72
TSPAN4-206ENST00000397408 ATP5JP18859 108 aa25.82■■□□□ 1.72
TSPAN4-206ENST00000397408 PRAMEF18Q5VWM3 479 aa25.82■■□□□ 1.72
TSPAN4-206ENST00000397408 SMC5Q8IY18 1101 aa25.82■■□□□ 1.72
TSPAN4-206ENST00000397408 GPATCH3Q96I76 525 aa25.82■■□□□ 1.72
TSPAN4-206ENST00000397408 DEFB129Q9H1M3 183 aa25.82■■□□□ 1.72
TSPAN4-206ENST00000397408 BOLA2Q9H3K6 86 aa25.82■■□□□ 1.72
TSPAN4-206ENST00000397408 ANTXR1Q9H6X2 564 aa25.82■■□□□ 1.72
TSPAN4-206ENST00000397408 ECHDC1Q9NTX5 307 aa25.82■■□□□ 1.72
TSPAN4-206ENST00000397408 TMOD2Q9NZR1 351 aa25.82■■□□□ 1.72
TSPAN4-206ENST00000397408 MROH7-TTC4A0A0A0MT08 1334 aa25.82■■□□□ 1.72
TSPAN4-206ENST00000397408 CACNB3P54284 484 aa25.81■■□□□ 1.72
TSPAN4-206ENST00000397408 GSTO1P78417 241 aa25.81■■□□□ 1.72
TSPAN4-206ENST00000397408 CEP350Q5VT06 3117 aa25.81■■□□□ 1.72
TSPAN4-206ENST00000397408 TCP10L2B9ZVM9 353 aa25.8■■□□□ 1.72
TSPAN4-206ENST00000397408 IDH1O75874 414 aaKnown RBP25.8■■□□□ 1.72
TSPAN4-206ENST00000397408 TNFAIP1Q13829 316 aa25.8■■□□□ 1.72
TSPAN4-206ENST00000397408 TSHZ3Q63HK5 1081 aa25.8■■□□□ 1.72
TSPAN4-206ENST00000397408 FAM163AQ96GL9 167 aaPredicted RBP25.8■■□□□ 1.72
TSPAN4-206ENST00000397408 DOCK2Q92608 1830 aa25.8■■□□□ 1.72
TSPAN4-206ENST00000397408 BTDP43251 543 aa25.8■■□□□ 1.72
TSPAN4-206ENST00000397408 NAA16Q6N069 864 aaPredicted RBP25.8■■□□□ 1.72
TSPAN4-206ENST00000397408 CDC42EP5Q6NZY7 148 aa25.8■■□□□ 1.72
TSPAN4-206ENST00000397408 OTUD7AQ8TE49 926 aaPredicted RBP25.8■■□□□ 1.72
TSPAN4-206ENST00000397408 ABT1Q9ULW3 272 aaKnown RBP25.8■■□□□ 1.72
TSPAN4-206ENST00000397408 PPP2R3BQ9Y5P8 575 aa25.8■■□□□ 1.72
TSPAN4-206ENST00000397408 GOLIM4O00461 696 aa25.79■■□□□ 1.72
TSPAN4-206ENST00000397408 LDHCP07864 332 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms