RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 ZBTB12Q9Y330 459 aaPredicted RBP20.5■□□□□ 0.87
TSPAN4-205ENST00000397406 ZNF646O15015 1829 aaPredicted RBP20.49■□□□□ 0.87
TSPAN4-205ENST00000397406 IL1R1P14778 569 aa20.49■□□□□ 0.87
TSPAN4-205ENST00000397406 LMOD1P29536 600 aaPredicted RBP20.49■□□□□ 0.87
TSPAN4-205ENST00000397406 TTF1Q15361 905 aaPredicted RBP20.49■□□□□ 0.87
TSPAN4-205ENST00000397406 CASC1Q6TDU7 716 aa20.49■□□□□ 0.87
TSPAN4-205ENST00000397406 CD209Q9NNX6 404 aa20.49■□□□□ 0.87
TSPAN4-205ENST00000397406 PIH1D3Q9NQM4 214 aaKnown RBP20.49■□□□□ 0.87
TSPAN4-205ENST00000397406 MKRN1Q9UHC7 482 aaKnown RBP20.49■□□□□ 0.87
TSPAN4-205ENST00000397406 PSMD14O00487 310 aa20.48■□□□□ 0.87
TSPAN4-205ENST00000397406 USP50Q70EL3 339 aaPredicted RBP20.48■□□□□ 0.87
TSPAN4-205ENST00000397406 TRPM4Q8TD43 1214 aa20.48■□□□□ 0.87
TSPAN4-205ENST00000397406 ZC3H12CQ9C0D7 883 aaKnown RBP20.48■□□□□ 0.87
TSPAN4-205ENST00000397406 MAST2Q6P0Q8 1798 aa20.48■□□□□ 0.87
TSPAN4-205ENST00000397406 HIP1O00291 1037 aa20.47■□□□□ 0.87
TSPAN4-205ENST00000397406 ECE2O60344 883 aa20.47■□□□□ 0.87
TSPAN4-205ENST00000397406 ESYT1Q9BSJ8 1104 aa20.47■□□□□ 0.87
TSPAN4-205ENST00000397406 ADARB2Q9NS39 739 aaKnown RBP20.47■□□□□ 0.87
TSPAN4-205ENST00000397406 PSME4Q14997 1843 aa20.47■□□□□ 0.87
TSPAN4-205ENST00000397406 TRAF5O00463 557 aa20.46■□□□□ 0.87
TSPAN4-205ENST00000397406 FRAT2O75474 233 aaPredicted RBP20.46■□□□□ 0.87
TSPAN4-205ENST00000397406 EGFRP00533 1210 aa20.46■□□□□ 0.87
TSPAN4-205ENST00000397406 COA1Q9GZY4 146 aa20.46■□□□□ 0.87
TSPAN4-205ENST00000397406 DIAPH3Q9NSV4 1193 aa20.46■□□□□ 0.87
TSPAN4-205ENST00000397406 CNTNAP1P78357 1384 aa20.46■□□□□ 0.87
TSPAN4-205ENST00000397406 SCN9AQ15858 1988 aa20.46■□□□□ 0.87
TSPAN4-205ENST00000397406 TMEM88BA6NKF7 163 aa20.45■□□□□ 0.86
TSPAN4-205ENST00000397406 CHGBP05060 677 aa20.45■□□□□ 0.86
TSPAN4-205ENST00000397406 IL25Q9H293 177 aa20.45■□□□□ 0.86
TSPAN4-205ENST00000397406 PGAP2Q9UHJ9 254 aa20.45■□□□□ 0.86
TSPAN4-205ENST00000397406 NMIQ13287 307 aaPredicted RBP20.44■□□□□ 0.86
TSPAN4-205ENST00000397406 TNIP1Q15025 636 aa20.44■□□□□ 0.86
TSPAN4-205ENST00000397406 CST9Q5W186 159 aa20.44■□□□□ 0.86
TSPAN4-205ENST00000397406 FAM227BQ96M60 508 aa20.44■□□□□ 0.86
TSPAN4-205ENST00000397406 TSHZ2Q9NRE2 1034 aa20.44■□□□□ 0.86
TSPAN4-205ENST00000397406 CNOT7Q9UIV1 285 aaKnown RBP20.44■□□□□ 0.86
TSPAN4-205ENST00000397406 RNF113AO15541 343 aaKnown RBP20.44■□□□□ 0.86
TSPAN4-205ENST00000397406 CHAF1AQ13111 956 aaPredicted RBP20.44■□□□□ 0.86
TSPAN4-205ENST00000397406 CWC27Q6UX04 472 aaKnown RBP20.44■□□□□ 0.86
TSPAN4-205ENST00000397406 MICALL2Q8IY33 904 aa20.44■□□□□ 0.86
TSPAN4-205ENST00000397406 SALL1Q9NSC2 1324 aa20.43■□□□□ 0.86
TSPAN4-205ENST00000397406 A0A0D9SFI3 127 aa20.43■□□□□ 0.86
TSPAN4-205ENST00000397406 SGSM2O43147 1006 aa20.43■□□□□ 0.86
TSPAN4-205ENST00000397406 ZFYP08048 801 aaPredicted RBP20.43■□□□□ 0.86
TSPAN4-205ENST00000397406 VEGFBP49765 207 aa20.43■□□□□ 0.86
TSPAN4-205ENST00000397406 MFAP1P55081 439 aaKnown RBP20.43■□□□□ 0.86
TSPAN4-205ENST00000397406 LRRFIP1Q32MZ4 808 aaKnown RBP20.43■□□□□ 0.86
TSPAN4-205ENST00000397406 DLK2Q6UY11 383 aa20.43■□□□□ 0.86
TSPAN4-205ENST00000397406 RUFY2Q8WXA3 655 aa20.43■□□□□ 0.86
TSPAN4-205ENST00000397406 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.43■□□□□ 0.86
TSPAN4-205ENST00000397406 RAD50Q92878 1312 aa20.42■□□□□ 0.86
TSPAN4-205ENST00000397406 IDH1O75874 414 aaKnown RBP20.42■□□□□ 0.86
TSPAN4-205ENST00000397406 ADD2P35612 726 aa20.42■□□□□ 0.86
TSPAN4-205ENST00000397406 SLFNL1Q499Z3 407 aa20.42■□□□□ 0.86
TSPAN4-205ENST00000397406 ZMYM1Q5SVZ6 1142 aa20.42■□□□□ 0.86
TSPAN4-205ENST00000397406 SAMD7Q7Z3H4 446 aa20.42■□□□□ 0.86
TSPAN4-205ENST00000397406 DPF2Q92785 391 aa20.42■□□□□ 0.86
TSPAN4-205ENST00000397406 FAM205AQ6ZU69 1335 aa20.41■□□□□ 0.86
TSPAN4-205ENST00000397406 EIF5BO60841 1220 aaKnown RBP20.41■□□□□ 0.86
TSPAN4-205ENST00000397406 VIL1P09327 827 aaKnown RBP20.41■□□□□ 0.86
TSPAN4-205ENST00000397406 HSPA1AP0DMV8 641 aaKnown RBP20.41■□□□□ 0.86
TSPAN4-205ENST00000397406 HSPA1BP0DMV9 641 aaKnown RBP20.41■□□□□ 0.86
TSPAN4-205ENST00000397406 MAP3K12Q12852 859 aa20.41■□□□□ 0.86
TSPAN4-205ENST00000397406 COL13A1Q5TAT6 717 aaPredicted RBP20.41■□□□□ 0.86
TSPAN4-205ENST00000397406 ZSCAN25Q6NSZ9 544 aa20.41■□□□□ 0.86
TSPAN4-205ENST00000397406 WDR66Q8TBY9 1149 aa20.41■□□□□ 0.86
TSPAN4-205ENST00000397406 GLIS2Q9BZE0 524 aaPredicted RBP20.41■□□□□ 0.86
TSPAN4-205ENST00000397406 JAG2Q9Y219 1238 aa20.41■□□□□ 0.86
TSPAN4-205ENST00000397406 TCRBV5S4A2TA0A5A2 114 aa20.4■□□□□ 0.86
TSPAN4-205ENST00000397406 RASSF10A6NK89 507 aa20.4■□□□□ 0.86
TSPAN4-205ENST00000397406 PDE6AP16499 860 aa20.4■□□□□ 0.86
TSPAN4-205ENST00000397406 SLC9C2Q5TAH2 1124 aa20.4■□□□□ 0.86
TSPAN4-205ENST00000397406 PODNQ7Z5L7 613 aa20.4■□□□□ 0.86
TSPAN4-205ENST00000397406 LRP2BPQ9P2M1 347 aa20.4■□□□□ 0.86
TSPAN4-205ENST00000397406 ABCF2Q9UG63 623 aa20.4■□□□□ 0.86
TSPAN4-205ENST00000397406 UBE3CQ15386 1083 aa20.39■□□□□ 0.85
TSPAN4-205ENST00000397406 ZGPATQ8N5A5 531 aaKnown RBP20.39■□□□□ 0.85
TSPAN4-205ENST00000397406 SEC62Q99442 399 aaKnown RBP20.39■□□□□ 0.85
TSPAN4-205ENST00000397406 HELLSQ9NRZ9 838 aa20.39■□□□□ 0.85
TSPAN4-205ENST00000397406 G3V3G9 751 aa20.38■□□□□ 0.85
TSPAN4-205ENST00000397406 REC8O95072 547 aa20.38■□□□□ 0.85
TSPAN4-205ENST00000397406 MCMDC2Q4G0Z9 681 aa20.38■□□□□ 0.85
TSPAN4-205ENST00000397406 DCAF8Q5TAQ9 597 aa20.38■□□□□ 0.85
TSPAN4-205ENST00000397406 IFFO2Q5TF58 517 aa20.38■□□□□ 0.85
TSPAN4-205ENST00000397406 APPBP2Q92624 585 aa20.38■□□□□ 0.85
TSPAN4-205ENST00000397406 GMLQ99445 158 aa20.38■□□□□ 0.85
TSPAN4-205ENST00000397406 MYH2Q9UKX2 1941 aa20.38■□□□□ 0.85
TSPAN4-205ENST00000397406 ZNF532Q9HCE3 1301 aa20.38■□□□□ 0.85
TSPAN4-205ENST00000397406 IGSF3O75054 1194 aa20.37■□□□□ 0.85
TSPAN4-205ENST00000397406 PRDX5P30044 214 aa20.37■□□□□ 0.85
TSPAN4-205ENST00000397406 GTF2IP78347 998 aa20.37■□□□□ 0.85
TSPAN4-205ENST00000397406 TBC1D10BQ4KMP7 808 aaPredicted RBP20.37■□□□□ 0.85
TSPAN4-205ENST00000397406 ERICH6Q7L0X2 663 aa20.37■□□□□ 0.85
TSPAN4-205ENST00000397406 ZNF589Q86UQ0 364 aaPredicted RBP20.37■□□□□ 0.85
TSPAN4-205ENST00000397406 MAGEB6Q8N7X4 407 aa20.37■□□□□ 0.85
TSPAN4-205ENST00000397406 ZNF384Q8TF68 577 aa20.37■□□□□ 0.85
TSPAN4-205ENST00000397406 OSBP2Q969R2 916 aa20.37■□□□□ 0.85
TSPAN4-205ENST00000397406 RAI14Q9P0K7 980 aa20.37■□□□□ 0.85
TSPAN4-205ENST00000397406 MAST3O60307 1309 aa20.37■□□□□ 0.85
TSPAN4-205ENST00000397406 ASTN2O75129 1339 aaPredicted RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms