RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 SOX10P56693 466 aa11.18□□□□□ -0.62
CAPN3-208ENST00000397204 GTF2IP78347 998 aa11.18□□□□□ -0.62
CAPN3-208ENST00000397204 PTPN12Q05209 780 aaKnown RBP11.18□□□□□ -0.62
CAPN3-208ENST00000397204 TWISTNBQ3B726 338 aaPredicted RBP11.18□□□□□ -0.62
CAPN3-208ENST00000397204 LDLRAD1Q5T700 205 aa11.18□□□□□ -0.62
CAPN3-208ENST00000397204 G2E3Q7L622 706 aa11.18□□□□□ -0.62
CAPN3-208ENST00000397204 WWC1Q8IX03 1113 aa11.18□□□□□ -0.62
CAPN3-208ENST00000397204 LINS1Q8NG48 757 aa11.18□□□□□ -0.62
CAPN3-208ENST00000397204 TSR2Q969E8 191 aaKnown RBP11.18□□□□□ -0.62
CAPN3-208ENST00000397204 CFHR5Q9BXR6 569 aa11.18□□□□□ -0.62
CAPN3-208ENST00000397204 HPS5Q9UPZ3 1129 aa11.18□□□□□ -0.62
CAPN3-208ENST00000397204 IL16Q14005 1332 aa11.17□□□□□ -0.62
CAPN3-208ENST00000397204 UNCXA6NJT0 531 aa11.17□□□□□ -0.62
CAPN3-208ENST00000397204 SASH1O94885 1247 aa11.17□□□□□ -0.62
CAPN3-208ENST00000397204 ALDH1A1P00352 501 aa11.17□□□□□ -0.62
CAPN3-208ENST00000397204 KCNJ4P48050 445 aa11.17□□□□□ -0.62
CAPN3-208ENST00000397204 CASP7P55210 303 aa11.17□□□□□ -0.62
CAPN3-208ENST00000397204 DLGAP5Q15398 846 aa11.17□□□□□ -0.62
CAPN3-208ENST00000397204 C15orf52Q6ZUT6 534 aaKnown RBP11.17□□□□□ -0.62
CAPN3-208ENST00000397204 KIAA0825Q8IV33 1275 aa11.17□□□□□ -0.62
CAPN3-208ENST00000397204 MTMR14Q8NCE2 650 aa11.17□□□□□ -0.62
CAPN3-208ENST00000397204 SLC10A4Q96EP9 437 aa11.17□□□□□ -0.62
CAPN3-208ENST00000397204 DDX27Q96GQ7 796 aaKnown RBP11.17□□□□□ -0.62
CAPN3-208ENST00000397204 CD209Q9NNX6 404 aa11.17□□□□□ -0.62
CAPN3-208ENST00000397204 PCDHGA4Q9Y5G9 962 aa11.17□□□□□ -0.62
CAPN3-208ENST00000397204 AKAP11Q9UKA4 1901 aa11.16□□□□□ -0.62
CAPN3-208ENST00000397204 ANKRD18BA2A2Z9 1011 aa11.16□□□□□ -0.62
CAPN3-208ENST00000397204 CHRNDQ07001 517 aa11.16□□□□□ -0.62
CAPN3-208ENST00000397204 FLIIQ13045 1269 aa11.16□□□□□ -0.62
CAPN3-208ENST00000397204 SPRYD7Q5W111 196 aa11.16□□□□□ -0.62
CAPN3-208ENST00000397204 DNAAF4Q8WXU2 420 aa11.16□□□□□ -0.62
CAPN3-208ENST00000397204 HS3ST6Q96QI5 342 aa11.16□□□□□ -0.62
CAPN3-208ENST00000397204 DEFB129Q9H1M3 183 aa11.16□□□□□ -0.62
CAPN3-208ENST00000397204 PAPPA2Q9BXP8 1791 aa11.16□□□□□ -0.62
CAPN3-208ENST00000397204 POTEB3A0JP26 581 aa11.15□□□□□ -0.62
CAPN3-208ENST00000397204 PPP1R12BO60237 982 aaPredicted RBP11.15□□□□□ -0.62
CAPN3-208ENST00000397204 FKTNO75072 461 aa11.15□□□□□ -0.62
CAPN3-208ENST00000397204 FKBP5Q13451 457 aaPredicted RBP11.15□□□□□ -0.62
CAPN3-208ENST00000397204 MFSD10Q14728 455 aa11.15□□□□□ -0.62
CAPN3-208ENST00000397204 MAP3K11Q16584 847 aa11.15□□□□□ -0.62
CAPN3-208ENST00000397204 SUPT20HL1Q3ZLR7 823 aa11.15□□□□□ -0.62
CAPN3-208ENST00000397204 FBXO46Q6PJ61 603 aaPredicted RBP11.15□□□□□ -0.62
CAPN3-208ENST00000397204 POTEBQ6S5H4 581 aa11.15□□□□□ -0.62
CAPN3-208ENST00000397204 CDAN1Q8IWY9 1227 aa11.15□□□□□ -0.62
CAPN3-208ENST00000397204 PPP2R3BQ9Y5P8 575 aa11.15□□□□□ -0.62
CAPN3-208ENST00000397204 MANSC4A6NHS7 340 aaPredicted RBP11.14□□□□□ -0.63
CAPN3-208ENST00000397204 NUDT7P0C024 238 aa11.14□□□□□ -0.63
CAPN3-208ENST00000397204 IL1R1P14778 569 aa11.14□□□□□ -0.63
CAPN3-208ENST00000397204 KLRK1P26718 216 aa11.14□□□□□ -0.63
CAPN3-208ENST00000397204 FKBP1AP62942 108 aaKnown RBP11.14□□□□□ -0.63
CAPN3-208ENST00000397204 IFIT5Q13325 482 aaKnown RBP11.14□□□□□ -0.63
CAPN3-208ENST00000397204 PRKG1Q13976 671 aa11.14□□□□□ -0.63
CAPN3-208ENST00000397204 ANGEL1Q9UNK9 670 aaKnown RBP11.14□□□□□ -0.63
CAPN3-208ENST00000397204 MYO1BO43795 1136 aa11.13□□□□□ -0.63
CAPN3-208ENST00000397204 VAMP4O75379 141 aa11.13□□□□□ -0.63
CAPN3-208ENST00000397204 TAF5LO75529 589 aa11.13□□□□□ -0.63
CAPN3-208ENST00000397204 ZBTB48P10074 688 aaPredicted RBP11.13□□□□□ -0.63
CAPN3-208ENST00000397204 FOXO4P98177 505 aa11.13□□□□□ -0.63
CAPN3-208ENST00000397204 PRPF38BQ5VTL8 546 aaKnown RBP11.13□□□□□ -0.63
CAPN3-208ENST00000397204 ZNF804AQ7Z570 1209 aa11.13□□□□□ -0.63
CAPN3-208ENST00000397204 WDR63Q8IWG1 891 aa11.13□□□□□ -0.63
CAPN3-208ENST00000397204 CERS5Q8N5B7 392 aa11.13□□□□□ -0.63
CAPN3-208ENST00000397204 HELBQ8NG08 1087 aaPredicted RBP11.13□□□□□ -0.63
CAPN3-208ENST00000397204 PTCD2Q8WV60 388 aaKnown RBP11.13□□□□□ -0.63
CAPN3-208ENST00000397204 R3HDMLQ9H3Y0 253 aa11.13□□□□□ -0.63
CAPN3-208ENST00000397204 IRS2Q9Y4H2 1338 aa11.12□□□□□ -0.63
CAPN3-208ENST00000397204 SNAP23O00161 211 aa11.12□□□□□ -0.63
CAPN3-208ENST00000397204 PRMT6Q96LA8 375 aaPredicted RBP11.12□□□□□ -0.63
CAPN3-208ENST00000397204 PSME4Q14997 1843 aa11.12□□□□□ -0.63
CAPN3-208ENST00000397204 IREB2P48200 963 aaKnown RBP11.11□□□□□ -0.63
CAPN3-208ENST00000397204 CCDC57Q2TAC2 916 aa11.11□□□□□ -0.63
CAPN3-208ENST00000397204 CFAP100Q494V2 611 aa11.11□□□□□ -0.63
CAPN3-208ENST00000397204 CCDC184Q52MB2 194 aa11.11□□□□□ -0.63
CAPN3-208ENST00000397204 BEND3Q5T5X7 828 aa11.11□□□□□ -0.63
CAPN3-208ENST00000397204 INTS3Q68E01 1043 aaKnown RBP11.11□□□□□ -0.63
CAPN3-208ENST00000397204 OTUD7BQ6GQQ9 843 aa11.11□□□□□ -0.63
CAPN3-208ENST00000397204 LMBR1LQ6UX01 489 aa11.11□□□□□ -0.63
CAPN3-208ENST00000397204 LDHAL6AQ6ZMR3 332 aa11.11□□□□□ -0.63
CAPN3-208ENST00000397204 COL1A1P02452 1464 aaPredicted RBP11.11□□□□□ -0.63
CAPN3-208ENST00000397204 MKI67P46013 3256 aaKnown RBP11.1□□□□□ -0.63
CAPN3-208ENST00000397204 USP2O75604 605 aaPredicted RBP11.1□□□□□ -0.63
CAPN3-208ENST00000397204 EXOSC9Q06265 439 aaKnown RBP11.1□□□□□ -0.63
CAPN3-208ENST00000397204 VARS2Q5ST30 1063 aaKnown RBP11.1□□□□□ -0.63
CAPN3-208ENST00000397204 NBPF12Q5TAG4 269 aaPredicted RBP11.1□□□□□ -0.63
CAPN3-208ENST00000397204 WNK4Q96J92 1243 aa11.1□□□□□ -0.63
CAPN3-208ENST00000397204 CLMNQ96JQ2 1002 aa11.1□□□□□ -0.63
CAPN3-208ENST00000397204 FZD1Q9UP38 647 aa11.1□□□□□ -0.63
CAPN3-208ENST00000397204 CHMP3Q9Y3E7 222 aa11.1□□□□□ -0.63
CAPN3-208ENST00000397204 HTTP42858 3142 aa11.1□□□□□ -0.63
CAPN3-208ENST00000397204 FAM205AQ6ZU69 1335 aa11.09□□□□□ -0.63
CAPN3-208ENST00000397204 FANCIQ9NVI1 1328 aa11.09□□□□□ -0.63
CAPN3-208ENST00000397204 CENPFP49454 3210 aa11.09□□□□□ -0.63
CAPN3-208ENST00000397204 CLRN2A0PK11 232 aa11.09□□□□□ -0.63
CAPN3-208ENST00000397204 TESPA1A2RU30 521 aaPredicted RBP11.09□□□□□ -0.63
CAPN3-208ENST00000397204 F8W031 263 aaPredicted RBP11.09□□□□□ -0.63
CAPN3-208ENST00000397204 RBM5P52756 815 aaKnown RBP eCLIP11.09□□□□□ -0.63
CAPN3-208ENST00000397204 TNFAIP1Q13829 316 aa11.09□□□□□ -0.63
CAPN3-208ENST00000397204 UBE4AQ14139 1066 aa11.09□□□□□ -0.63
CAPN3-208ENST00000397204 RASA3Q14644 834 aa11.09□□□□□ -0.63
CAPN3-208ENST00000397204 TAF7LQ5H9L4 462 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms